Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:14 (211960): wrapper (7.7.26015): starting
01:20:14 (211960): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 01:20:14] Arguments: --nthreads 4
[2026-03-04 01:20:14] Threads: 4
[2026-03-04 01:20:14] Checking for CVMFS
[2026-03-04 01:20:14] No cvmfs_config command found, will try listing directly
[2026-03-04 01:20:14] CVMFS is ok
[2026-03-04 01:20:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 01:20:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 01:20:14] Further information can be found at the LHC@home message board.
[2026-03-04 01:20:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 01:20:14] Checking for apptainer binary...
[2026-03-04 01:20:14] which: no apptainer in ((null))
[2026-03-04 01:20:14] apptainer is not installed, using version from CVMFS
[2026-03-04 01:20:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 01:20:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-03-04 01:20:15] apptainer works
[2026-03-04 01:20:15] Set ATHENA_PROC_NUMBER=4
[2026-03-04 01:20:15] Set ATHENA_CORE_NUMBER=4
[2026-03-04 01:20:15] Starting ATLAS job with PandaID=7036278147
[2026-03-04 01:20:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 04:11:59]  *** The last 200 lines of the pilot log: ***
[2026-03-04 04:11:59] 2026-03-04 03:10:59,585 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2088820/.job.ad'
[2026-03-04 04:11:59] 2026-03-04 03:10:59,586 | INFO     | total number of processed events: 400 (read)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,610 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036278147/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,610 | INFO     | extracted standard info from prmon json
[2026-03-04 04:11:59] 2026-03-04 03:10:59,610 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:11:59] 2026-03-04 03:10:59,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:11:59] 2026-03-04 03:10:59,611 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:11:59] 2026-03-04 03:10:59,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:11:59] 2026-03-04 03:10:59,615 | INFO     | fitting pss+swap vs Time
[2026-03-04 04:11:59] 2026-03-04 03:10:59,615 | INFO     | sum of square deviations: 1470248962.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,616 | INFO     | sum of deviations: -28368188897.000008
[2026-03-04 04:11:59] 2026-03-04 03:10:59,616 | INFO     | mean x: 1772588757.5
[2026-03-04 04:11:59] 2026-03-04 03:10:59,616 | INFO     | mean y: 2393252.023809524
[2026-03-04 04:11:59] 2026-03-04 03:10:59,616 | INFO     | intersect: 34204174045.022964
[2026-03-04 04:11:59] 2026-03-04 03:10:59,617 | INFO     | chi2: 1.9937455515960496
[2026-03-04 04:11:59] 2026-03-04 03:10:59,617 | INFO     | sum of square deviations: 1342841922.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,618 | INFO     | sum of deviations: -17615081325.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,618 | INFO     | mean x: 1772588605.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,618 | INFO     | mean y: 2405841.4478527606
[2026-03-04 04:11:59] 2026-03-04 03:10:59,618 | INFO     | intersect: 23254802062.69369
[2026-03-04 04:11:59] 2026-03-04 03:10:59,619 | INFO     | chi2: 1.3312139369354559
[2026-03-04 04:11:59] 2026-03-04 03:10:59,619 | INFO     | current chi2=1.3312139369354559 (change=33.230499956738136 %)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,619 | INFO     | sum of square deviations: 1223016419.5
[2026-03-04 04:11:59] 2026-03-04 03:10:59,620 | INFO     | sum of deviations: -16806217725.999998
[2026-03-04 04:11:59] 2026-03-04 03:10:59,620 | INFO     | mean x: 1772588452.5
[2026-03-04 04:11:59] 2026-03-04 03:10:59,620 | INFO     | mean y: 2406871.240506329
[2026-03-04 04:11:59] 2026-03-04 03:10:59,620 | INFO     | intersect: 24360630519.20062
[2026-03-04 04:11:59] 2026-03-04 03:10:59,620 | INFO     | chi2: 1.3281884524312515
[2026-03-04 04:11:59] 2026-03-04 03:10:59,621 | INFO     | current chi2=1.3281884524312515 (change=0.22727259836005298 %)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,621 | INFO     | right removable region: 157
[2026-03-04 04:11:59] 2026-03-04 03:10:59,621 | INFO     | sum of square deviations: 1342841922.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,622 | INFO     | sum of deviations: -45529599009.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,622 | INFO     | mean x: 1772588910.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,622 | INFO     | mean y: 2413359.8711656444
[2026-03-04 04:11:59] 2026-03-04 03:10:59,623 | INFO     | intersect: 60102757978.1712
[2026-03-04 04:11:59] 2026-03-04 03:10:59,626 | INFO     | chi2: 0.7839982814937003
[2026-03-04 04:11:59] 2026-03-04 03:10:59,626 | INFO     | current chi2=0.7839982814937003 (change=60.677114445918754 %)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,626 | INFO     | sum of square deviations: 1223016419.5
[2026-03-04 04:11:59] 2026-03-04 03:10:59,627 | INFO     | sum of deviations: -40131898231.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,627 | INFO     | mean x: 1772589062.5
[2026-03-04 04:11:59] 2026-03-04 03:10:59,627 | INFO     | mean y: 2406458.5316455695
[2026-03-04 04:11:59] 2026-03-04 03:10:59,627 | INFO     | intersect: 58167908349.92609
[2026-03-04 04:11:59] 2026-03-04 03:10:59,627 | INFO     | chi2: 0.7759658725795167
[2026-03-04 04:11:59] 2026-03-04 03:10:59,627 | INFO     | current chi2=0.7759658725795167 (change=1.0245441991122792 %)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,628 | INFO     | left removable region: 20
[2026-03-04 04:11:59] 2026-03-04 03:10:59,628 | INFO     | sum of square deviations: 797291228.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,628 | INFO     | sum of deviations: -18828779293.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,629 | INFO     | mean x: 1772589032.0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,629 | INFO     | mean y: 2406867.9197080294
[2026-03-04 04:11:59] 2026-03-04 03:10:59,629 | INFO     | intersect: 41863757511.95377
[2026-03-04 04:11:59] 2026-03-04 03:10:59,629 | INFO     | chi2: 0.06062053641555741
[2026-03-04 04:11:59] 2026-03-04 03:10:59,629 | INFO     | current memory leak: -23.62 B/s (using 137 data points, chi2=0.06)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,630 | INFO     | time since job start (10222s) is within the limit (349056.0s)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,630 | INFO     | could have reported an average CPU frequency of 2730 MHz (9 samples)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | ..............................
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . Timing measurements:
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . get job = 0 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . initial setup = 8 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . payload setup = 8 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . stage-in = 0 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . payload execution = 10196 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . stage-out = 0 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | . log creation = 0 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,631 | INFO     | ..............................
[2026-03-04 04:11:59] 2026-03-04 03:10:59,725 | INFO     | 
[2026-03-04 04:11:59] 2026-03-04 03:10:59,725 | INFO     | job summary report
[2026-03-04 04:11:59] 2026-03-04 03:10:59,725 | INFO     | --------------------------------------------------
[2026-03-04 04:11:59] 2026-03-04 03:10:59,725 | INFO     | PanDA job id: 7036278147
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | task id: 48838581
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | errors: (none)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | pilot state: finished 
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | transexitcode: 0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | exeerrorcode: 0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | exeerrordiag: 
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | exitcode: 0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | exitmsg: OK
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | cpuconsumptiontime: 38867 s
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | nevents: 400
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | neventsw: 0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,726 | INFO     | pid: 221309
[2026-03-04 04:11:59] 2026-03-04 03:10:59,727 | INFO     | pgrp: 221309
[2026-03-04 04:11:59] 2026-03-04 03:10:59,727 | INFO     | corecount: 4
[2026-03-04 04:11:59] 2026-03-04 03:10:59,727 | INFO     | event service: False
[2026-03-04 04:11:59] 2026-03-04 03:10:59,727 | INFO     | sizes: {0: 2286009, 1: 2287138, 12: 2287138, 10208: 2316167, 10210: 2325243, 10211: 2325445}
[2026-03-04 04:11:59] 2026-03-04 03:10:59,727 | INFO     | --------------------------------------------------
[2026-03-04 04:11:59] 2026-03-04 03:10:59,727 | INFO     | 
[2026-03-04 04:11:59] 2026-03-04 03:10:59,727 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-03-04 04:11:59] 2026-03-04 03:10:59,758 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,758 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,758 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,758 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,760 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,760 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 04:11:59] 2026-03-04 03:10:59,760 | INFO     | job 7036278147 has completed (purged errors)
[2026-03-04 04:11:59] 2026-03-04 03:10:59,760 | INFO     | overall cleanup function is called
[2026-03-04 04:11:59] 2026-03-04 03:11:00,769 | INFO     | --- collectZombieJob: --- 10, [221309]
[2026-03-04 04:11:59] 2026-03-04 03:11:00,769 | INFO     | zombie collector waiting for pid 221309
[2026-03-04 04:11:59] 2026-03-04 03:11:00,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 04:11:59] 2026-03-04 03:11:00,770 | INFO     | collected zombie processes
[2026-03-04 04:11:59] 2026-03-04 03:11:00,770 | INFO     | will attempt to kill all subprocesses of pid=221309
[2026-03-04 04:11:59] 2026-03-04 03:11:01,426 | INFO     | process IDs to be killed: [221309] (in reverse order)
[2026-03-04 04:11:59] 2026-03-04 03:11:01,679 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 04:11:59] 2026-03-04 03:11:01,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 04:11:59] 2026-03-04 03:11:01,704 | INFO     | did not find any defunct processes belonging to 221309
[2026-03-04 04:11:59] 2026-03-04 03:11:01,726 | INFO     | did not find any defunct processes belonging to 221309
[2026-03-04 04:11:59] 2026-03-04 03:11:01,726 | INFO     | ready for new job
[2026-03-04 04:11:59] 2026-03-04 03:11:01,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 04:11:59] 2026-03-04 03:11:01,729 | INFO     | **************************************
[2026-03-04 04:11:59] 2026-03-04 03:11:01,729 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 04:11:59] 2026-03-04 03:11:01,729 | INFO     | **************************************
[2026-03-04 04:11:59] 2026-03-04 03:11:01,729 | INFO     | 
[2026-03-04 04:11:59] 2026-03-04 03:11:01,738 | INFO     | architecture information:
[2026-03-04 04:11:59] 2026-03-04 03:11:01,738 | INFO     | executing command: cat /etc/os-release
[2026-03-04 04:11:59] 2026-03-04 03:11:01,764 | INFO     | cat /etc/os-release:
[2026-03-04 04:11:59] NAME="CentOS Linux"
[2026-03-04 04:11:59] VERSION="7 (Core)"
[2026-03-04 04:11:59] ID="centos"
[2026-03-04 04:11:59] ID_LIKE="rhel fedora"
[2026-03-04 04:11:59] VERSION_ID="7"
[2026-03-04 04:11:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 04:11:59] ANSI_COLOR="0;31"
[2026-03-04 04:11:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 04:11:59] HOME_URL="https://www.centos.org/"
[2026-03-04 04:11:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 04:11:59] 
[2026-03-04 04:11:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 04:11:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 04:11:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 04:11:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 04:11:59] 
[2026-03-04 04:11:59] 2026-03-04 03:11:01,765 | INFO     | **************************************
[2026-03-04 04:11:59] 2026-03-04 03:11:02,268 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-03-04 04:11:59] 2026-03-04 03:11:02,294 | INFO     | sufficient remaining disk space (3324407447552 B)
[2026-03-04 04:11:59] 2026-03-04 03:11:02,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 04:11:59] 2026-03-04 03:11:02,295 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 04:11:59] 2026-03-04 03:11:02,295 | INFO     | update_server=False
[2026-03-04 04:11:59] 2026-03-04 03:11:02,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 04:11:59] 2026-03-04 03:11:02,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 04:11:59] 2026-03-04 03:11:02,638 | INFO     | all data control threads have been joined
[2026-03-04 04:11:59] 2026-03-04 03:11:02,639 | INFO     | all job control threads have been joined
[2026-03-04 04:11:59] 2026-03-04 03:11:03,206 | INFO     | job.realtimelogging is not enabled
[2026-03-04 04:11:59] 2026-03-04 03:11:03,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:11:59] 2026-03-04 03:11:03,218 | INFO     | aborting loop
[2026-03-04 04:11:59] 2026-03-04 03:11:03,301 | INFO     | [job] retrieve thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:03,379 | INFO     | [job] validate thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:03,386 | INFO     | [payload] validate_post thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:03,442 | INFO     | all payload control threads have been joined
[2026-03-04 04:11:59] 2026-03-04 03:11:03,576 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:03,644 | INFO     | [job] control thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:03,645 | INFO     | [data] control thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:03,707 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:03,952 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:04,107 | INFO     | [data] copytool_in thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:04,209 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:04,224 | INFO     | [job] job monitor thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:04,447 | INFO     | [payload] control thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:04,465 | INFO     | [payload] failed_post thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:04,528 | INFO     | [data] copytool_out thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:04,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:11:59] 2026-03-04 03:11:05,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 04:11:59] 2026-03-04 03:11:05,741 | INFO     | [job] queue monitor thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:09,594 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 04:11:59] 2026-03-04 03:11:33,443 | INFO     | PID=216294 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 04:11:59] 2026-03-04 03:11:33,443 | INFO     | .. there are 19 such processes running
[2026-03-04 04:11:59] 2026-03-04 03:11:33,444 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 04:11:59] 2026-03-04 03:11:33,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 04:11:59] 2026-03-04 03:11:33,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 04:11:59] 2026-03-04 03:11:52,967 | INFO     | [monitor] cgroup control has ended
[2026-03-04 04:11:59] 2026-03-04 03:11:54,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23143277872960)>', '<ExcThread(monitor, started 23143040431872)>']
[2026-03-04 04:11:59] 2026-03-04 03:11:54,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 04:11:59] 2026-03-04 03:11:54,549 | INFO     | [monitor] control thread has ended
[2026-03-04 04:11:59] 2026-03-04 03:11:59,194 | INFO     | all workflow threads have been joined
[2026-03-04 04:11:59] 2026-03-04 03:11:59,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 04:11:59] 2026-03-04 03:11:59,195 | INFO     | traces error code: 0
[2026-03-04 04:11:59] 2026-03-04 03:11:59,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 04:11:59] 2026-03-04 03:11:59,338 [wrapper] ==== pilot stdout END ====
[2026-03-04 04:11:59] 2026-03-04 03:11:59,342 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 04:11:59] 2026-03-04 03:11:59,346 [wrapper] pilotpid: 216294
[2026-03-04 04:11:59] 2026-03-04 03:11:59,350 [wrapper] Pilot exit status: 0
[2026-03-04 04:11:59] 2026-03-04 03:11:59,365 [wrapper] pandaids: 7036278147
[2026-03-04 04:11:59] 2026-03-04 03:11:59,521 [wrapper] cleanup supervisor_pilot  512898 216295
[2026-03-04 04:11:59] 2026-03-04 03:11:59,525 [wrapper] Test setup, not cleaning
[2026-03-04 04:11:59] 2026-03-04 03:11:59,529 [wrapper] apfmon messages muted
[2026-03-04 04:11:59] 2026-03-04 03:11:59,532 [wrapper] ==== wrapper stdout END ====
[2026-03-04 04:11:59] 2026-03-04 03:11:59,535 [wrapper] ==== wrapper stderr END ====
[2026-03-04 04:11:59]  *** Error codes and diagnostics ***
[2026-03-04 04:11:59]     "exeErrorCode": 0,
[2026-03-04 04:11:59]     "exeErrorDiag": "",
[2026-03-04 04:11:59]     "pilotErrorCode": 0,
[2026-03-04 04:11:59]     "pilotErrorDiag": "",
[2026-03-04 04:11:59]  *** Listing of results directory ***
[2026-03-04 04:11:59] total 517428
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc    584627 Mar  3 12:44 pilot3.tar.gz
[2026-03-04 04:11:59] -rwx------ 1 boinc boinc     36322 Mar  3 12:47 runpilot2-wrapper.sh
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc      5111 Mar  3 12:50 queuedata.json
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc       100 Mar  4 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 04:11:59] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 01:20 run_atlas
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc       105 Mar  4 01:20 job.xml
[2026-03-04 04:11:59] -rw-r--r-- 2 boinc boinc 292563218 Mar  4 01:20 EVNT.48220205._000240.pool.root.1
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc      6697 Mar  4 01:20 init_data.xml
[2026-03-04 04:11:59] -rw-r--r-- 2 boinc boinc     15845 Mar  4 01:20 start_atlas.sh
[2026-03-04 04:11:59] drwxrwx--x 2 boinc boinc      4096 Mar  4 01:20 shared
[2026-03-04 04:11:59] -rw-r--r-- 2 boinc boinc    597975 Mar  4 01:20 input.tar.gz
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc         0 Mar  4 01:20 boinc_lockfile
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc      2588 Mar  4 01:20 pandaJob.out
[2026-03-04 04:11:59] -rw------- 1 boinc boinc    998484 Mar  4 01:20 agis_schedconf.cvmfs.json
[2026-03-04 04:11:59] -rw------- 1 boinc boinc   1516092 Mar  4 01:20 agis_ddmendpoints.agis.ALL.json
[2026-03-04 04:11:59] -rw------- 1 boinc boinc       443 Mar  4 01:20 workernode_map.json
[2026-03-04 04:11:59] drwx------ 5 boinc boinc      4096 Mar  4 01:20 pilot3
[2026-03-04 04:11:59] -rw------- 1 boinc boinc 229818869 Mar  4 04:10 HITS.48838581._005773.pool.root.1
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc       529 Mar  4 04:10 boinc_task_state.xml
[2026-03-04 04:11:59] -rw------- 1 boinc boinc      1029 Mar  4 04:10 memory_monitor_summary.json
[2026-03-04 04:11:59] -rw------- 1 boinc boinc    335278 Mar  4 04:10 log.48838581._005773.job.log.tgz.1
[2026-03-04 04:11:59] -rw------- 1 boinc boinc      6355 Mar  4 04:10 heartbeat.json
[2026-03-04 04:11:59] -rw------- 1 boinc boinc        95 Mar  4 04:11 pilot_heartbeat.json
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc      8192 Mar  4 04:11 boinc_mmap_file
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc        27 Mar  4 04:11 wrapper_checkpoint.txt
[2026-03-04 04:11:59] -rw------- 1 boinc boinc      4902 Mar  4 04:11 pilotlog.txt
[2026-03-04 04:11:59] -rw------- 1 boinc boinc   1433576 Mar  4 04:11 log.48838581._005773.job.log.1
[2026-03-04 04:11:59] -rw------- 1 boinc boinc       357 Mar  4 04:11 output.list
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc       620 Mar  4 04:11 runtime_log
[2026-03-04 04:11:59] -rw------- 1 boinc boinc   1781760 Mar  4 04:11 result.tar.gz
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc      9205 Mar  4 04:11 runtime_log.err
[2026-03-04 04:11:59] -rw------- 1 boinc boinc       665 Mar  4 04:11 LxlNDmHPdH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmRELDmtWqAAo.diag
[2026-03-04 04:11:59] -rw-r--r-- 1 boinc boinc     20867 Mar  4 04:11 stderr.txt
[2026-03-04 04:11:59] HITS file was successfully produced:
[2026-03-04 04:11:59] -rw------- 1 boinc boinc 229818869 Mar  4 04:10 shared/HITS.pool.root.1
[2026-03-04 04:11:59]  *** Contents of shared directory: ***
[2026-03-04 04:11:59] total 512492
[2026-03-04 04:11:59] -rw-r--r-- 2 boinc boinc 292563218 Mar  4 01:20 ATLAS.root_0
[2026-03-04 04:11:59] -rw-r--r-- 2 boinc boinc     15845 Mar  4 01:20 start_atlas.sh
[2026-03-04 04:11:59] -rw-r--r-- 2 boinc boinc    597975 Mar  4 01:20 input.tar.gz
[2026-03-04 04:11:59] -rw------- 1 boinc boinc 229818869 Mar  4 04:10 HITS.pool.root.1
[2026-03-04 04:11:59] -rw------- 1 boinc boinc   1781760 Mar  4 04:11 result.tar.gz
04:12:01 (211960): run_atlas exited; CPU time 39411.677110
04:12:01 (211960): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN