Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:24:13 (405123): wrapper (7.7.26015): starting
16:24:13 (405123): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 16:24:13] Arguments: --nthreads 4
[2026-03-04 16:24:13] Threads: 4
[2026-03-04 16:24:13] Checking for CVMFS
[2026-03-04 16:24:13] No cvmfs_config command found, will try listing directly
[2026-03-04 16:24:13] CVMFS is ok
[2026-03-04 16:24:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 16:24:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 16:24:13] Further information can be found at the LHC@home message board.
[2026-03-04 16:24:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 16:24:13] Checking for apptainer binary...
[2026-03-04 16:24:13] which: no apptainer in ((null))
[2026-03-04 16:24:13] apptainer is not installed, using version from CVMFS
[2026-03-04 16:24:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 16:24:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-04 16:24:13] apptainer works
[2026-03-04 16:24:13] Set ATHENA_PROC_NUMBER=4
[2026-03-04 16:24:13] Set ATHENA_CORE_NUMBER=4
[2026-03-04 16:24:13] Starting ATLAS job with PandaID=7036199288
[2026-03-04 16:24:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 19:07:50]  *** The last 200 lines of the pilot log: ***
[2026-03-04 19:07:50] 2026-03-04 18:07:02,749 | INFO     | mean y: 2305920.09375
[2026-03-04 19:07:50] 2026-03-04 18:07:02,749 | INFO     | intersect: -12786652868.024944
[2026-03-04 19:07:50] 2026-03-04 18:07:02,749 | INFO     | chi2: 1.9319833243948838
[2026-03-04 19:07:50] 2026-03-04 18:07:02,749 | INFO     | sum of square deviations: 1154663510.0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | sum of deviations: 18931055126.000004
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | mean x: 1772642587.0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | mean y: 2318490.0967741935
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | intersect: -29060689254.204643
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | chi2: 1.1062879915711998
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | current chi2=1.1062879915711998 (change=42.73822255077175 %)
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | sum of square deviations: 1046484737.5
[2026-03-04 19:07:50] 2026-03-04 18:07:02,750 | INFO     | sum of deviations: 18365270427.000004
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | mean x: 1772642434.5
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | mean y: 2317692.3866666667
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | intersect: -31106647888.65043
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | chi2: 1.1067184107230272
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | current chi2=1.1067184107230272 (change=-0.038906609771303634 %)
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | right removable region: 149
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | sum of square deviations: 1154663510.0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | sum of deviations: -6589899418.000001
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | mean x: 1772642892.0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | mean y: 2326335.0516129034
[2026-03-04 19:07:50] 2026-03-04 18:07:02,751 | INFO     | intersect: 10119159733.824766
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | chi2: 0.8484739928533258
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | current chi2=0.8484739928533258 (change=56.08274760243719 %)
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | sum of square deviations: 1046484737.5
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | sum of deviations: -7236878441.5
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | mean x: 1772643044.5
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | mean y: 2327243.98
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | intersect: 12260893254.090563
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | chi2: 0.8480793619832109
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | current chi2=0.8480793619832109 (change=0.046510661898761414 %)
[2026-03-04 19:07:50] 2026-03-04 18:07:02,752 | INFO     | left removable region: 20
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | sum of deviations: 1439121150.0000002
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | mean x: 1772643014.0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | mean y: 2343107.7519379845
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | intersect: -3830289436.7086864
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | chi2: 0.0003770555124223359
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | current memory leak: 2.16 B/s (using 129 data points, chi2=0.00)
[2026-03-04 19:07:50] 2026-03-04 18:07:02,753 | INFO     | could have reported an average CPU frequency of 3567 MHz (9 samples)
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | ..............................
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . Timing measurements:
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . get job = 0 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . initial setup = 5 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . payload setup = 5 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . stage-in = 0 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . payload execution = 9729 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . stage-out = 1 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | . log creation = 0 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,754 | INFO     | ..............................
[2026-03-04 19:07:50] 2026-03-04 18:07:02,820 | INFO     | 
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | job summary report
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | --------------------------------------------------
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | PanDA job id: 7036199288
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | task id: 48850478
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | errors: (none)
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | pilot state: finished 
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | transexitcode: 0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | exeerrorcode: 0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | exeerrordiag: 
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | exitcode: 0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | exitmsg: OK
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | cpuconsumptiontime: 34078 s
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | nevents: 400
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | neventsw: 0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | pid: 424032
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | pgrp: 424032
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | corecount: 4
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | event service: False
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | sizes: {0: 2286955, 1: 2287161, 11: 2287189, 9739: 2316226, 9741: 2325248, 9742: 2325304, 9744: 2325690}
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | --------------------------------------------------
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | 
[2026-03-04 19:07:50] 2026-03-04 18:07:02,821 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-03-04 19:07:50] 2026-03-04 18:07:02,880 | INFO     | time since job start (9754s) is within the limit (349056.0s)
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,029 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 19:07:50] 2026-03-04 18:07:03,030 | INFO     | job 7036199288 has completed (purged errors)
[2026-03-04 19:07:50] 2026-03-04 18:07:03,030 | INFO     | overall cleanup function is called
[2026-03-04 19:07:50] 2026-03-04 18:07:03,713 | WARNING  | process 424032 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 19:07:50] 2026-03-04 18:07:04,041 | INFO     | --- collectZombieJob: --- 10, [424032]
[2026-03-04 19:07:50] 2026-03-04 18:07:04,042 | INFO     | zombie collector waiting for pid 424032
[2026-03-04 19:07:50] 2026-03-04 18:07:04,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 19:07:50] 2026-03-04 18:07:04,042 | INFO     | collected zombie processes
[2026-03-04 19:07:50] 2026-03-04 18:07:04,042 | INFO     | will attempt to kill all subprocesses of pid=424032
[2026-03-04 19:07:50] 2026-03-04 18:07:04,112 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 19:07:50] 2026-03-04 18:07:04,113 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 19:07:50] 2026-03-04 18:07:04,113 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-04 19:07:50] 2026-03-04 18:07:04,113 | WARNING  | maxPSS not found in memory monitor output
[2026-03-04 19:07:50] 2026-03-04 18:07:04,114 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7036199288/payload.stdout) since it has not been created yet
[2026-03-04 19:07:50] 2026-03-04 18:07:04,114 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-03-04 19:07:50] 2026-03-04 18:07:04,174 | INFO     | sufficient remaining disk space (21135097856 B)
[2026-03-04 19:07:50] 2026-03-04 18:07:04,174 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-04 19:07:50] 2026-03-04 18:07:04,174 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7036199288/HITS.48850478._000005.pool.root.1 since it does not exist
[2026-03-04 19:07:50] 2026-03-04 18:07:05,365 | INFO     | process IDs to be killed: [424032] (in reverse order)
[2026-03-04 19:07:50] 2026-03-04 18:07:05,501 | INFO     | number of running child processes to parent process 424032: 1
[2026-03-04 19:07:50] 2026-03-04 18:07:05,501 | INFO     | maximum number of monitored processes: 6
[2026-03-04 19:07:50] 2026-03-04 18:07:05,501 | INFO     | aborting job monitoring since job object (job id=7036199288) has expired
[2026-03-04 19:07:50] 2026-03-04 18:07:10,461 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 19:07:50] 2026-03-04 18:07:10,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 19:07:50] 2026-03-04 18:07:10,501 | INFO     | did not find any defunct processes belonging to 424032
[2026-03-04 19:07:50] 2026-03-04 18:07:10,540 | INFO     | did not find any defunct processes belonging to 424032
[2026-03-04 19:07:50] 2026-03-04 18:07:10,540 | INFO     | ready for new job
[2026-03-04 19:07:50] 2026-03-04 18:07:10,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 19:07:50] 2026-03-04 18:07:10,541 | INFO     | **************************************
[2026-03-04 19:07:50] 2026-03-04 18:07:10,542 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 19:07:50] 2026-03-04 18:07:10,542 | INFO     | **************************************
[2026-03-04 19:07:50] 2026-03-04 18:07:10,542 | INFO     | 
[2026-03-04 19:07:50] 2026-03-04 18:07:10,548 | INFO     | architecture information:
[2026-03-04 19:07:50] 2026-03-04 18:07:10,548 | INFO     | executing command: cat /etc/os-release
[2026-03-04 19:07:50] 2026-03-04 18:07:10,614 | INFO     | cat /etc/os-release:
[2026-03-04 19:07:50] NAME="CentOS Linux"
[2026-03-04 19:07:50] VERSION="7 (Core)"
[2026-03-04 19:07:50] ID="centos"
[2026-03-04 19:07:50] ID_LIKE="rhel fedora"
[2026-03-04 19:07:50] VERSION_ID="7"
[2026-03-04 19:07:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 19:07:50] ANSI_COLOR="0;31"
[2026-03-04 19:07:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 19:07:50] HOME_URL="https://www.centos.org/"
[2026-03-04 19:07:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 19:07:50] 
[2026-03-04 19:07:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 19:07:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 19:07:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 19:07:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 19:07:50] 
[2026-03-04 19:07:50] 2026-03-04 18:07:10,614 | INFO     | **************************************
[2026-03-04 19:07:50] 2026-03-04 18:07:11,118 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-03-04 19:07:50] 2026-03-04 18:07:11,176 | INFO     | sufficient remaining disk space (21128806400 B)
[2026-03-04 19:07:50] 2026-03-04 18:07:11,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 19:07:50] 2026-03-04 18:07:11,176 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 19:07:50] 2026-03-04 18:07:11,176 | INFO     | update_server=False
[2026-03-04 19:07:50] 2026-03-04 18:07:11,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 19:07:50] 2026-03-04 18:07:11,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 19:07:50] 2026-03-04 18:07:11,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 19:07:50] 2026-03-04 18:07:11,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:07:50] 2026-03-04 18:07:11,523 | INFO     | aborting loop
[2026-03-04 19:07:50] 2026-03-04 18:07:11,608 | INFO     | all job control threads have been joined
[2026-03-04 19:07:50] 2026-03-04 18:07:11,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:07:50] 2026-03-04 18:07:12,182 | INFO     | [job] retrieve thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:12,240 | INFO     | all data control threads have been joined
[2026-03-04 19:07:50] 2026-03-04 18:07:12,252 | INFO     | [data] copytool_in thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:12,252 | INFO     | [payload] validate_post thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:12,420 | INFO     | all payload control threads have been joined
[2026-03-04 19:07:50] 2026-03-04 18:07:12,528 | INFO     | [job] job monitor thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:12,615 | INFO     | [job] control thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:12,651 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:12,857 | INFO     | [job] queue monitor thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:12,888 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:13,175 | INFO     | [payload] failed_post thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:13,191 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:13,246 | INFO     | [data] control thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:13,344 | INFO     | [data] copytool_out thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:13,426 | INFO     | [payload] control thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:13,457 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:13,458 | INFO     | [job] validate thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:15,529 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 19:07:50] 2026-03-04 18:07:36,728 | INFO     | PID=415903 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 19:07:50] 2026-03-04 18:07:36,728 | INFO     | .. there are 56 such processes running
[2026-03-04 19:07:50] 2026-03-04 18:07:36,729 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 19:07:50] 2026-03-04 18:07:36,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 19:07:50] 2026-03-04 18:07:36,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 19:07:50] 2026-03-04 18:07:44,368 | INFO     | [monitor] cgroup control has ended
[2026-03-04 19:07:50] 2026-03-04 18:07:44,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23355293181760)>', '<ExcThread(monitor, started 23355045701376)>']
[2026-03-04 19:07:50] 2026-03-04 18:07:44,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 19:07:50] 2026-03-04 18:07:44,781 | INFO     | [monitor] control thread has ended
[2026-03-04 19:07:50] 2026-03-04 18:07:49,500 | INFO     | all workflow threads have been joined
[2026-03-04 19:07:50] 2026-03-04 18:07:49,501 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 19:07:50] 2026-03-04 18:07:49,501 | INFO     | traces error code: 0
[2026-03-04 19:07:50] 2026-03-04 18:07:49,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 19:07:50] 2026-03-04 18:07:49,958 [wrapper] ==== pilot stdout END ====
[2026-03-04 19:07:50] 2026-03-04 18:07:49,968 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 19:07:50] 2026-03-04 18:07:49,978 [wrapper] pilotpid: 415903
[2026-03-04 19:07:50] 2026-03-04 18:07:50,015 [wrapper] Pilot exit status: 0
[2026-03-04 19:07:50] 2026-03-04 18:07:50,048 [wrapper] pandaids: 7036199288
[2026-03-04 19:07:50] 2026-03-04 18:07:50,276 [wrapper] cleanup supervisor_pilot 1775587 415904
[2026-03-04 19:07:50] 2026-03-04 18:07:50,285 [wrapper] Test setup, not cleaning
[2026-03-04 19:07:50] 2026-03-04 18:07:50,296 [wrapper] apfmon messages muted
[2026-03-04 19:07:50] 2026-03-04 18:07:50,333 [wrapper] ==== wrapper stdout END ====
[2026-03-04 19:07:50] 2026-03-04 18:07:50,348 [wrapper] ==== wrapper stderr END ====
[2026-03-04 19:07:50]  *** Error codes and diagnostics ***
[2026-03-04 19:07:50]     "exeErrorCode": 0,
[2026-03-04 19:07:50]     "exeErrorDiag": "",
[2026-03-04 19:07:50]     "pilotErrorCode": 0,
[2026-03-04 19:07:50]     "pilotErrorDiag": "",
[2026-03-04 19:07:50]  *** Listing of results directory ***
[2026-03-04 19:07:50] total 422164
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc      5111 Mar  3 05:58 queuedata.json
[2026-03-04 19:07:50] -rwx------. 1 boinc boinc     36322 Mar  3 05:58 runpilot2-wrapper.sh
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc       100 Mar  4 16:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 19:07:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 16:24 run_atlas
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc       105 Mar  4 16:24 job.xml
[2026-03-04 19:07:50] -rw-r--r--. 2 boinc boinc 226658908 Mar  4 16:24 EVNT.48458945._000001.pool.root.1
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc      6707 Mar  4 16:24 init_data.xml
[2026-03-04 19:07:50] -rw-r--r--. 2 boinc boinc     15845 Mar  4 16:24 start_atlas.sh
[2026-03-04 19:07:50] drwxrwx--x. 2 boinc boinc      4096 Mar  4 16:24 shared
[2026-03-04 19:07:50] -rw-r--r--. 2 boinc boinc    597959 Mar  4 16:24 input.tar.gz
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc         0 Mar  4 16:24 boinc_lockfile
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc      2621 Mar  4 16:24 pandaJob.out
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc    997352 Mar  4 16:24 agis_schedconf.cvmfs.json
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc   1516092 Mar  4 16:24 agis_ddmendpoints.agis.ALL.json
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc       442 Mar  4 16:24 workernode_map.json
[2026-03-04 19:07:50] drwx------. 5 boinc boinc      4096 Mar  4 16:24 pilot3
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc 198323222 Mar  4 19:06 HITS.48850478._000005.pool.root.1
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc       529 Mar  4 19:06 boinc_task_state.xml
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc      1031 Mar  4 19:06 memory_monitor_summary.json
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc    329748 Mar  4 19:07 log.48850478._000005.job.log.tgz.1
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc      6338 Mar  4 19:07 heartbeat.json
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc      8192 Mar  4 19:07 boinc_mmap_file
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc        27 Mar  4 19:07 wrapper_checkpoint.txt
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc        95 Mar  4 19:07 pilot_heartbeat.json
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc      4829 Mar  4 19:07 pilotlog.txt
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc   1357983 Mar  4 19:07 log.48850478._000005.job.log.1
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc       357 Mar  4 19:07 output.list
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc       620 Mar  4 19:07 runtime_log
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc   1710080 Mar  4 19:07 result.tar.gz
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc      9221 Mar  4 19:07 runtime_log.err
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc       662 Mar  4 19:07 SsLMDmG1WH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9iFLDmwAUyRo.diag
[2026-03-04 19:07:50] -rw-r--r--. 1 boinc boinc     21298 Mar  4 19:07 stderr.txt
[2026-03-04 19:07:50] HITS file was successfully produced:
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc 198323222 Mar  4 19:06 shared/HITS.pool.root.1
[2026-03-04 19:07:50]  *** Contents of shared directory: ***
[2026-03-04 19:07:50] total 417304
[2026-03-04 19:07:50] -rw-r--r--. 2 boinc boinc 226658908 Mar  4 16:24 ATLAS.root_0
[2026-03-04 19:07:50] -rw-r--r--. 2 boinc boinc     15845 Mar  4 16:24 start_atlas.sh
[2026-03-04 19:07:50] -rw-r--r--. 2 boinc boinc    597959 Mar  4 16:24 input.tar.gz
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc 198323222 Mar  4 19:06 HITS.pool.root.1
[2026-03-04 19:07:50] -rw-------. 1 boinc boinc   1710080 Mar  4 19:07 result.tar.gz
19:07:52 (405123): run_atlas exited; CPU time 34553.330206
19:07:52 (405123): called boinc_finish(0)

</stderr_txt>
]]>

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