Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:42:44 (584549): wrapper (7.7.26015): starting
15:42:44 (584549): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 15:42:44] Arguments: --nthreads 12
[2026-03-03 15:42:44] Threads: 12
[2026-03-03 15:42:44] Checking for CVMFS
[2026-03-03 15:42:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 15:42:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 15:42:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 15:42:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 15:42:45] 2.13.3.0 1829844 8663 82652 156847 2 50 3235664 4097025 923 130560 0 6655815 99.990 334147 16802 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-03-03 15:42:45] CVMFS is ok
[2026-03-03 15:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 15:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 15:42:45] Further information can be found at the LHC@home message board.
[2026-03-03 15:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 15:42:45] Checking for apptainer binary...
[2026-03-03 15:42:45] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-03-03 15:42:45] apptainer is not installed, using version from CVMFS
[2026-03-03 15:42:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 15:42:45] pckelar3.cern.ch
[2026-03-03 15:42:45] apptainer works
[2026-03-03 15:42:45] Set ATHENA_PROC_NUMBER=12
[2026-03-03 15:42:45] Set ATHENA_CORE_NUMBER=12
[2026-03-03 15:42:45] Starting ATLAS job with PandaID=7036184500
[2026-03-03 15:42:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 18:03:23]  *** The last 200 lines of the pilot log: ***
[2026-03-03 18:03:23] 2026-03-03 17:02:51,169 | INFO     | mean x: 1772553186.5
[2026-03-03 18:03:23] 2026-03-03 17:02:51,169 | INFO     | mean y: 2746301.5362318843
[2026-03-03 18:03:23] 2026-03-03 17:02:51,169 | INFO     | intersect: -10459493559.342463
[2026-03-03 18:03:23] 2026-03-03 17:02:51,170 | INFO     | chi2: 2.5799681333427724
[2026-03-03 18:03:23] 2026-03-03 17:02:51,170 | INFO     | sum of square deviations: 729472282.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,171 | INFO     | sum of deviations: 15752766087.000002
[2026-03-03 18:03:23] 2026-03-03 17:02:51,171 | INFO     | mean x: 1772553034.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,171 | INFO     | mean y: 2765238.887218045
[2026-03-03 18:03:23] 2026-03-03 17:02:51,172 | INFO     | intersect: -38275061089.00082
[2026-03-03 18:03:23] 2026-03-03 17:02:51,172 | INFO     | chi2: 1.5941154591905717
[2026-03-03 18:03:23] 2026-03-03 17:02:51,172 | INFO     | current chi2=1.5941154591905717 (change=38.21181592948075 %)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,173 | INFO     | sum of square deviations: 650252192.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,173 | INFO     | sum of deviations: 15049044589.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,174 | INFO     | mean x: 1772552881.5
[2026-03-03 18:03:23] 2026-03-03 17:02:51,174 | INFO     | mean y: 2763883.59375
[2026-03-03 18:03:23] 2026-03-03 17:02:51,174 | INFO     | intersect: -41020131045.84608
[2026-03-03 18:03:23] 2026-03-03 17:02:51,174 | INFO     | chi2: 1.5964536284506394
[2026-03-03 18:03:23] 2026-03-03 17:02:51,175 | INFO     | current chi2=1.5964536284506394 (change=-0.14667502573840668 %)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,175 | INFO     | right removable region: 127
[2026-03-03 18:03:23] 2026-03-03 17:02:51,175 | INFO     | sum of square deviations: 729472282.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,176 | INFO     | sum of deviations: -17641724600.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,176 | INFO     | mean x: 1772553339.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,177 | INFO     | mean y: 2785745.6466165413
[2026-03-03 18:03:23] 2026-03-03 17:02:51,177 | INFO     | intersect: 42870621326.33896
[2026-03-03 18:03:23] 2026-03-03 17:02:51,177 | INFO     | chi2: 1.2130171891667445
[2026-03-03 18:03:23] 2026-03-03 17:02:51,177 | INFO     | current chi2=1.2130171891667445 (change=52.983249153737354 %)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,178 | INFO     | sum of square deviations: 650252192.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,179 | INFO     | sum of deviations: -21729873535.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,179 | INFO     | mean x: 1772553491.5
[2026-03-03 18:03:23] 2026-03-03 17:02:51,179 | INFO     | mean y: 2793616.734375
[2026-03-03 18:03:23] 2026-03-03 17:02:51,179 | INFO     | intersect: 59237293212.727585
[2026-03-03 18:03:23] 2026-03-03 17:02:51,179 | INFO     | chi2: 1.1664314872635595
[2026-03-03 18:03:23] 2026-03-03 17:02:51,180 | INFO     | current chi2=1.1664314872635595 (change=3.8404815957460614 %)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,180 | INFO     | left removable region: 20
[2026-03-03 18:03:23] 2026-03-03 17:02:51,180 | INFO     | sum of square deviations: 379832238.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,181 | INFO     | sum of deviations: 348912191.99999964
[2026-03-03 18:03:23] 2026-03-03 17:02:51,181 | INFO     | mean x: 1772553461.0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,181 | INFO     | mean y: 2788882.3925233646
[2026-03-03 18:03:23] 2026-03-03 17:02:51,181 | INFO     | intersect: -1625470785.0101573
[2026-03-03 18:03:23] 2026-03-03 17:02:51,182 | INFO     | chi2: 0.03899089213334541
[2026-03-03 18:03:23] 2026-03-03 17:02:51,182 | INFO     | current memory leak: 0.92 B/s (using 107 data points, chi2=0.04)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,182 | INFO     | could have reported an average CPU frequency of 2840 MHz (8 samples)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,183 | INFO     | ..............................
[2026-03-03 18:03:23] 2026-03-03 17:02:51,183 | INFO     | . Timing measurements:
[2026-03-03 18:03:23] 2026-03-03 17:02:51,183 | INFO     | . get job = 0 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,183 | INFO     | . initial setup = 6 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,183 | INFO     | . payload setup = 8 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,184 | INFO     | . stage-in = 0 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,184 | INFO     | . payload execution = 8361 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,184 | INFO     | . stage-out = 1 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,184 | INFO     | . log creation = 0 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,184 | INFO     | ..............................
[2026-03-03 18:03:23] 2026-03-03 17:02:51,699 | INFO     | 
[2026-03-03 18:03:23] 2026-03-03 17:02:51,699 | INFO     | job summary report
[2026-03-03 18:03:23] 2026-03-03 17:02:51,700 | INFO     | --------------------------------------------------
[2026-03-03 18:03:23] 2026-03-03 17:02:51,700 | INFO     | PanDA job id: 7036184500
[2026-03-03 18:03:23] 2026-03-03 17:02:51,700 | INFO     | task id: 48838577
[2026-03-03 18:03:23] 2026-03-03 17:02:51,700 | INFO     | errors: (none)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,700 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 18:03:23] 2026-03-03 17:02:51,700 | INFO     | pilot state: finished 
[2026-03-03 18:03:23] 2026-03-03 17:02:51,700 | INFO     | transexitcode: 0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,701 | INFO     | exeerrorcode: 0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,701 | INFO     | exeerrordiag: 
[2026-03-03 18:03:23] 2026-03-03 17:02:51,701 | INFO     | exitcode: 0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,701 | INFO     | exitmsg: OK
[2026-03-03 18:03:23] 2026-03-03 17:02:51,701 | INFO     | cpuconsumptiontime: 90979 s
[2026-03-03 18:03:23] 2026-03-03 17:02:51,701 | INFO     | nevents: 400
[2026-03-03 18:03:23] 2026-03-03 17:02:51,702 | INFO     | neventsw: 0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,702 | INFO     | pid: 594104
[2026-03-03 18:03:23] 2026-03-03 17:02:51,702 | INFO     | pgrp: 594104
[2026-03-03 18:03:23] 2026-03-03 17:02:51,702 | INFO     | corecount: 12
[2026-03-03 18:03:23] 2026-03-03 17:02:51,702 | INFO     | event service: False
[2026-03-03 18:03:23] 2026-03-03 17:02:51,702 | INFO     | sizes: {0: 2286645, 1: 2287106, 12: 2287106, 8374: 2314783, 8376: 2323837, 8377: 2323975}
[2026-03-03 18:03:23] 2026-03-03 17:02:51,703 | INFO     | --------------------------------------------------
[2026-03-03 18:03:23] 2026-03-03 17:02:51,703 | INFO     | 
[2026-03-03 18:03:23] 2026-03-03 17:02:51,703 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-03 18:03:23] 2026-03-03 17:02:51,723 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,723 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,724 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,724 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,726 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,727 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 18:03:23] 2026-03-03 17:02:51,727 | INFO     | job 7036184500 has completed (purged errors)
[2026-03-03 18:03:23] 2026-03-03 17:02:51,727 | INFO     | overall cleanup function is called
[2026-03-03 18:03:23] 2026-03-03 17:02:52,735 | INFO     | --- collectZombieJob: --- 10, [594104]
[2026-03-03 18:03:23] 2026-03-03 17:02:52,735 | INFO     | zombie collector waiting for pid 594104
[2026-03-03 18:03:23] 2026-03-03 17:02:52,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 18:03:23] 2026-03-03 17:02:52,736 | INFO     | collected zombie processes
[2026-03-03 18:03:23] 2026-03-03 17:02:52,736 | INFO     | will attempt to kill all subprocesses of pid=594104
[2026-03-03 18:03:23] 2026-03-03 17:02:52,922 | INFO     | process IDs to be killed: [594104] (in reverse order)
[2026-03-03 18:03:23] 2026-03-03 17:02:52,978 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 18:03:23] 2026-03-03 17:02:52,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 18:03:23] 2026-03-03 17:02:52,985 | INFO     | did not find any defunct processes belonging to 594104
[2026-03-03 18:03:23] 2026-03-03 17:02:52,990 | INFO     | did not find any defunct processes belonging to 594104
[2026-03-03 18:03:23] 2026-03-03 17:02:52,991 | INFO     | ready for new job
[2026-03-03 18:03:23] 2026-03-03 17:02:52,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 18:03:23] 2026-03-03 17:02:52,993 | INFO     | **************************************
[2026-03-03 18:03:23] 2026-03-03 17:02:52,993 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 18:03:23] 2026-03-03 17:02:52,993 | INFO     | **************************************
[2026-03-03 18:03:23] 2026-03-03 17:02:52,993 | INFO     | 
[2026-03-03 18:03:23] 2026-03-03 17:02:52,995 | INFO     | architecture information:
[2026-03-03 18:03:23] 2026-03-03 17:02:52,995 | INFO     | executing command: cat /etc/os-release
[2026-03-03 18:03:23] 2026-03-03 17:02:53,010 | INFO     | cat /etc/os-release:
[2026-03-03 18:03:23] NAME="CentOS Linux"
[2026-03-03 18:03:23] VERSION="7 (Core)"
[2026-03-03 18:03:23] ID="centos"
[2026-03-03 18:03:23] ID_LIKE="rhel fedora"
[2026-03-03 18:03:23] VERSION_ID="7"
[2026-03-03 18:03:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 18:03:23] ANSI_COLOR="0;31"
[2026-03-03 18:03:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 18:03:23] HOME_URL="https://www.centos.org/"
[2026-03-03 18:03:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 18:03:23] 
[2026-03-03 18:03:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 18:03:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 18:03:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 18:03:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 18:03:23] 
[2026-03-03 18:03:23] 2026-03-03 17:02:53,010 | INFO     | **************************************
[2026-03-03 18:03:23] 2026-03-03 17:02:53,211 | WARNING  | process 594104 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 18:03:23] 2026-03-03 17:02:53,369 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 18:03:23] 2026-03-03 17:02:53,370 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 18:03:23] 2026-03-03 17:02:53,371 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 18:03:23] 2026-03-03 17:02:53,371 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 18:03:23] 2026-03-03 17:02:53,371 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/0/PanDA_Pilot-7036184500/payload.stdout) since it has not been created yet
[2026-03-03 18:03:23] 2026-03-03 17:02:53,372 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-03 18:03:23] 2026-03-03 17:02:53,389 | INFO     | sufficient remaining disk space (564461043712 B)
[2026-03-03 18:03:23] 2026-03-03 17:02:53,390 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 18:03:23] 2026-03-03 17:02:53,390 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-7036184500/HITS.48838577._002873.pool.root.1 since it does not exist
[2026-03-03 18:03:23] 2026-03-03 17:02:53,513 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-03 18:03:23] 2026-03-03 17:02:53,529 | INFO     | sufficient remaining disk space (564461043712 B)
[2026-03-03 18:03:23] 2026-03-03 17:02:53,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 18:03:23] 2026-03-03 17:02:53,530 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 18:03:23] 2026-03-03 17:02:53,530 | INFO     | update_server=False
[2026-03-03 18:03:23] 2026-03-03 17:02:53,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 18:03:23] 2026-03-03 17:02:53,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 18:03:23] 2026-03-03 17:02:53,586 | INFO     | number of running child processes to parent process 594104: 1
[2026-03-03 18:03:23] 2026-03-03 17:02:53,586 | INFO     | maximum number of monitored processes: 6
[2026-03-03 18:03:23] 2026-03-03 17:02:53,586 | INFO     | aborting job monitoring since job object (job id=7036184500) has expired
[2026-03-03 18:03:23] 2026-03-03 17:02:53,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 18:03:23] 2026-03-03 17:02:53,587 | INFO     | will abort loop
[2026-03-03 18:03:23] 2026-03-03 17:02:53,745 | INFO     | all payload control threads have been joined
[2026-03-03 18:03:23] 2026-03-03 17:02:53,817 | INFO     | all data control threads have been joined
[2026-03-03 18:03:23] 2026-03-03 17:02:54,537 | INFO     | [job] retrieve thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:54,592 | INFO     | [job] job monitor thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:54,750 | INFO     | [payload] control thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:54,822 | INFO     | [data] control thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:54,862 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:55,001 | INFO     | [payload] validate_post thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:55,091 | INFO     | all job control threads have been joined
[2026-03-03 18:03:23] 2026-03-03 17:02:55,509 | INFO     | [data] copytool_in thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:55,510 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:55,511 | INFO     | [job] validate thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:55,537 | INFO     | [data] copytool_out thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:55,944 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:55,993 | INFO     | [payload] failed_post thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:56,030 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:56,097 | INFO     | [job] control thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:02:56,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 18:03:23] 2026-03-03 17:02:56,979 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 18:03:23] 2026-03-03 17:02:57,353 | INFO     | [job] queue monitor thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:03:00,985 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 18:03:23] 2026-03-03 17:03:15,470 | INFO     | [monitor] cgroup control has ended
[2026-03-03 18:03:23] 2026-03-03 17:03:17,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232546490176)>', '<ExcThread(monitor, started 140232116643584)>']
[2026-03-03 18:03:23] 2026-03-03 17:03:22,545 | INFO     | all workflow threads have been joined
[2026-03-03 18:03:23] 2026-03-03 17:03:22,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 18:03:23] 2026-03-03 17:03:22,546 | INFO     | traces error code: 0
[2026-03-03 18:03:23] 2026-03-03 17:03:22,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 18:03:23] 2026-03-03 17:03:23,323 | INFO     | PID=588755 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 18:03:23] 2026-03-03 17:03:23,324 | INFO     | .. there are 2 such processes running
[2026-03-03 18:03:23] 2026-03-03 17:03:23,325 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 18:03:23] 2026-03-03 17:03:23,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 18:03:23] 2026-03-03 17:03:23,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 18:03:23] 2026-03-03 17:03:23,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 18:03:23] 2026-03-03 17:03:23,326 | INFO     | [monitor] control thread has ended
[2026-03-03 18:03:23] 2026-03-03 17:03:23,439 [wrapper] ==== pilot stdout END ====
[2026-03-03 18:03:23] 2026-03-03 17:03:23,442 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 18:03:23] 2026-03-03 17:03:23,445 [wrapper] pilotpid: 588755
[2026-03-03 18:03:23] 2026-03-03 17:03:23,447 [wrapper] Pilot exit status: 0
[2026-03-03 18:03:23] 2026-03-03 17:03:23,457 [wrapper] pandaids: 7036184500
[2026-03-03 18:03:23] 2026-03-03 17:03:23,494 [wrapper] cleanup supervisor_pilot  614456 588756
[2026-03-03 18:03:23] 2026-03-03 17:03:23,497 [wrapper] Test setup, not cleaning
[2026-03-03 18:03:23] 2026-03-03 17:03:23,499 [wrapper] apfmon messages muted
[2026-03-03 18:03:23] 2026-03-03 17:03:23,502 [wrapper] ==== wrapper stdout END ====
[2026-03-03 18:03:23] 2026-03-03 17:03:23,504 [wrapper] ==== wrapper stderr END ====
[2026-03-03 18:03:23]  *** Error codes and diagnostics ***
[2026-03-03 18:03:23]     "exeErrorCode": 0,
[2026-03-03 18:03:23]     "exeErrorDiag": "",
[2026-03-03 18:03:23]     "pilotErrorCode": 0,
[2026-03-03 18:03:23]     "pilotErrorDiag": "",
[2026-03-03 18:03:23]  *** Listing of results directory ***
[2026-03-03 18:03:23] total 518948
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-03 18:03:23] -rwx------ 1 boinc boinc     36322 Mar  3 05:47 runpilot2-wrapper.sh
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc      5111 Mar  3 05:49 queuedata.json
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc       100 Mar  3 15:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 18:03:23] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 15:42 run_atlas
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc       105 Mar  3 15:42 job.xml
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc      6234 Mar  3 15:42 init_data.xml
[2026-03-03 18:03:23] -rw-r--r-- 2 boinc boinc 292060345 Mar  3 15:42 EVNT.48220197._000110.pool.root.1
[2026-03-03 18:03:23] -rw-r--r-- 2 boinc boinc     15845 Mar  3 15:42 start_atlas.sh
[2026-03-03 18:03:23] drwxrwx--x 2 boinc boinc        68 Mar  3 15:42 shared
[2026-03-03 18:03:23] -rw-r--r-- 2 boinc boinc    597973 Mar  3 15:42 input.tar.gz
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc         0 Mar  3 15:42 boinc_lockfile
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc      2567 Mar  3 15:42 pandaJob.out
[2026-03-03 18:03:23] -rw------- 1 boinc boinc    998442 Mar  3 15:42 agis_schedconf.cvmfs.json
[2026-03-03 18:03:23] -rw------- 1 boinc boinc   1516104 Mar  3 15:42 agis_ddmendpoints.agis.ALL.json
[2026-03-03 18:03:23] -rw------- 1 boinc boinc       436 Mar  3 15:43 workernode_map.json
[2026-03-03 18:03:23] drwx------ 5 boinc boinc      4096 Mar  3 15:43 pilot3
[2026-03-03 18:03:23] -rw------- 1 boinc boinc 232154998 Mar  3 18:02 HITS.48838577._002873.pool.root.1
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc       529 Mar  3 18:02 boinc_task_state.xml
[2026-03-03 18:03:23] -rw------- 1 boinc boinc      1017 Mar  3 18:02 memory_monitor_summary.json
[2026-03-03 18:03:23] -rw------- 1 boinc boinc    441974 Mar  3 18:02 log.48838577._002873.job.log.tgz.1
[2026-03-03 18:03:23] -rw------- 1 boinc boinc      6346 Mar  3 18:02 heartbeat.json
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc        27 Mar  3 18:03 wrapper_checkpoint.txt
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc      8192 Mar  3 18:03 boinc_mmap_file
[2026-03-03 18:03:23] -rw------- 1 boinc boinc        95 Mar  3 18:03 pilot_heartbeat.json
[2026-03-03 18:03:23] -rw------- 1 boinc boinc       821 Mar  3 18:03 pilotlog.txt
[2026-03-03 18:03:23] -rw------- 1 boinc boinc   1194237 Mar  3 18:03 log.48838577._002873.job.log.1
[2026-03-03 18:03:23] -rw------- 1 boinc boinc       357 Mar  3 18:03 output.list
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc       620 Mar  3 18:03 runtime_log
[2026-03-03 18:03:23] -rw------- 1 boinc boinc   1658880 Mar  3 18:03 result.tar.gz
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc      8840 Mar  3 18:03 runtime_log.err
[2026-03-03 18:03:23] -rw------- 1 boinc boinc       656 Mar  3 18:03 2OiKDmhqWH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkcFLDmdgPIJm.diag
[2026-03-03 18:03:23] -rw-r--r-- 1 boinc boinc     21493 Mar  3 18:03 stderr.txt
[2026-03-03 18:03:23] HITS file was successfully produced:
[2026-03-03 18:03:23] -rw------- 1 boinc boinc 232154998 Mar  3 18:02 shared/HITS.pool.root.1
[2026-03-03 18:03:23]  *** Contents of shared directory: ***
[2026-03-03 18:03:23] total 514152
[2026-03-03 18:03:23] -rw-r--r-- 2 boinc boinc 292060345 Mar  3 15:42 ATLAS.root_0
[2026-03-03 18:03:23] -rw-r--r-- 2 boinc boinc     15845 Mar  3 15:42 start_atlas.sh
[2026-03-03 18:03:23] -rw-r--r-- 2 boinc boinc    597973 Mar  3 15:42 input.tar.gz
[2026-03-03 18:03:23] -rw------- 1 boinc boinc 232154998 Mar  3 18:02 HITS.pool.root.1
[2026-03-03 18:03:23] -rw------- 1 boinc boinc   1658880 Mar  3 18:03 result.tar.gz
18:03:25 (584549): run_atlas exited; CPU time 91175.700167
18:03:25 (584549): called boinc_finish(0)

</stderr_txt>
]]>

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