Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:17:10 (16841): wrapper (7.7.26015): starting
23:17:10 (16841): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 23:17:10] Arguments: --nthreads 8
[2026-03-03 23:17:10] Threads: 8
[2026-03-03 23:17:10] Checking for CVMFS
[2026-03-03 23:17:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 23:17:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 23:17:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 23:17:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 23:17:13] 2.11.2.0 21704 112324 136064 156859 3 53 15838396 25165824 899 130560 161 38362421 99.808 30873126 1090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 23:17:13] CVMFS is ok
[2026-03-03 23:17:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 23:17:13] Checking for apptainer binary...
[2026-03-03 23:17:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 23:17:13] Running /usr/bin/apptainer --version
[2026-03-03 23:17:13] apptainer version 1.3.2-1.el7
[2026-03-03 23:17:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 23:17:39] cg-vwn497.simple-grid.lan
[2026-03-03 23:17:39] apptainer works
[2026-03-03 23:17:39] Set ATHENA_PROC_NUMBER=8
[2026-03-03 23:17:39] Set ATHENA_CORE_NUMBER=8
[2026-03-03 23:17:39] Starting ATLAS job with PandaID=7036184459
[2026-03-03 23:17:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 04:02:38]  *** The last 200 lines of the pilot log: ***
[2026-03-04 04:02:38] 2026-03-04 03:01:42,317 | INFO     | job 7036184459 has finished - writing final server update
[2026-03-04 04:02:38] 2026-03-04 03:01:42,317 | INFO     | total number of processed events: 400 (read)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,319 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7036184459/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,320 | INFO     | extracted standard info from prmon json
[2026-03-04 04:02:38] 2026-03-04 03:01:42,320 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:02:38] 2026-03-04 03:01:42,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:02:38] 2026-03-04 03:01:42,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:02:38] 2026-03-04 03:01:42,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:02:38] 2026-03-04 03:01:42,326 | INFO     | fitting pss+swap vs Time
[2026-03-04 04:02:38] 2026-03-04 03:01:42,327 | INFO     | sum of square deviations: 6035722470.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,329 | INFO     | sum of deviations: 88736106713.99998
[2026-03-04 04:02:38] 2026-03-04 03:01:42,329 | INFO     | mean x: 1772585105.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,329 | INFO     | mean y: 2475650.6468401486
[2026-03-04 04:02:38] 2026-03-04 03:01:42,329 | INFO     | intersect: -26057751905.99343
[2026-03-04 04:02:38] 2026-03-04 03:01:42,330 | INFO     | chi2: 8.858292545634892
[2026-03-04 04:02:38] 2026-03-04 03:01:42,330 | INFO     | sum of square deviations: 5705372090.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,333 | INFO     | sum of deviations: 123881982705.50009
[2026-03-04 04:02:38] 2026-03-04 03:01:42,336 | INFO     | mean x: 1772584952.5
[2026-03-04 04:02:38] 2026-03-04 03:01:42,336 | INFO     | mean y: 2491683.0492424243
[2026-03-04 04:02:38] 2026-03-04 03:01:42,336 | INFO     | intersect: -38486030181.198654
[2026-03-04 04:02:38] 2026-03-04 03:01:42,337 | INFO     | chi2: 7.343463451241399
[2026-03-04 04:02:38] 2026-03-04 03:01:42,337 | INFO     | current chi2=7.343463451241399 (change=17.10068940023839 %)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,337 | INFO     | right removable region: 263
[2026-03-04 04:02:38] 2026-03-04 03:01:42,337 | INFO     | sum of square deviations: 5705372090.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,340 | INFO     | sum of deviations: -6644156904.999992
[2026-03-04 04:02:38] 2026-03-04 03:01:42,340 | INFO     | mean x: 1772585257.5
[2026-03-04 04:02:38] 2026-03-04 03:01:42,340 | INFO     | mean y: 2519656.053030303
[2026-03-04 04:02:38] 2026-03-04 03:01:42,340 | INFO     | intersect: 2066773203.8562226
[2026-03-04 04:02:38] 2026-03-04 03:01:42,341 | INFO     | chi2: 3.935364709589837
[2026-03-04 04:02:38] 2026-03-04 03:01:42,341 | INFO     | current chi2=3.935364709589837 (change=55.57422957848609 %)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,341 | INFO     | sum of square deviations: 5387301010.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,343 | INFO     | sum of deviations: -66636701279.00001
[2026-03-04 04:02:38] 2026-03-04 03:01:42,344 | INFO     | mean x: 1772585410.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,344 | INFO     | mean y: 2548325.2586872587
[2026-03-04 04:02:38] 2026-03-04 03:01:42,347 | INFO     | intersect: 21928043900.580875
[2026-03-04 04:02:38] 2026-03-04 03:01:42,347 | INFO     | chi2: 1.90522557371912
[2026-03-04 04:02:38] 2026-03-04 03:01:42,348 | INFO     | current chi2=1.90522557371912 (change=51.58706462259016 %)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,348 | INFO     | sum of square deviations: 5081276667.5
[2026-03-04 04:02:38] 2026-03-04 03:01:42,350 | INFO     | sum of deviations: -71809411121.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,350 | INFO     | mean x: 1772585562.5
[2026-03-04 04:02:38] 2026-03-04 03:01:42,350 | INFO     | mean y: 2550867.496062992
[2026-03-04 04:02:38] 2026-03-04 03:01:42,351 | INFO     | intersect: 25053012342.82795
[2026-03-04 04:02:38] 2026-03-04 03:01:42,351 | INFO     | chi2: 1.8532009859685932
[2026-03-04 04:02:38] 2026-03-04 03:01:42,351 | INFO     | current chi2=1.8532009859685932 (change=2.730626150948179 %)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,351 | INFO     | left removable region: 30
[2026-03-04 04:02:38] 2026-03-04 03:01:42,352 | INFO     | sum of square deviations: 3922276332.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,354 | INFO     | sum of deviations: -11568888632.000002
[2026-03-04 04:02:38] 2026-03-04 03:01:42,354 | INFO     | mean x: 1772585837.0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,354 | INFO     | mean y: 2555782.1416309015
[2026-03-04 04:02:38] 2026-03-04 03:01:42,354 | INFO     | intersect: 5230858533.686141
[2026-03-04 04:02:38] 2026-03-04 03:01:42,354 | INFO     | chi2: 0.10561961254944113
[2026-03-04 04:02:38] 2026-03-04 03:01:42,355 | INFO     | current memory leak: -2.95 B/s (using 233 data points, chi2=0.11)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,355 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,355 | INFO     | ..............................
[2026-03-04 04:02:38] 2026-03-04 03:01:42,355 | INFO     | . Timing measurements:
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | . get job = 0 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | . initial setup = 124 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | . payload setup = 148 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | . stage-in = 0 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | . payload execution = 16492 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | . stage-out = 3 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | . log creation = 1 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,356 | INFO     | ..............................
[2026-03-04 04:02:38] 2026-03-04 03:01:42,542 | INFO     | time since job start (16664s) is within the limit (349056.0s)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,866 | INFO     | 
[2026-03-04 04:02:38] 2026-03-04 03:01:42,866 | INFO     | job summary report
[2026-03-04 04:02:38] 2026-03-04 03:01:42,866 | INFO     | --------------------------------------------------
[2026-03-04 04:02:38] 2026-03-04 03:01:42,866 | INFO     | PanDA job id: 7036184459
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | task id: 48838577
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | errors: (none)
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | pilot state: finished 
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | transexitcode: 0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | exeerrorcode: 0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | exeerrordiag: 
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | exitcode: 0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | exitmsg: OK
[2026-03-04 04:02:38] 2026-03-04 03:01:42,867 | INFO     | cpuconsumptiontime: 62505 s
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | nevents: 400
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | neventsw: 0
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | pid: 25280
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | pgrp: 25280
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | corecount: 8
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | event service: False
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | sizes: {0: 2285988, 1: 2286674, 2: 2287135, 13: 2287135, 16644: 2318976, 16645: 2318975, 16650: 2328215, 16651: 2328353}
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | --------------------------------------------------
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | 
[2026-03-04 04:02:38] 2026-03-04 03:01:42,868 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-04 04:02:38] 2026-03-04 03:01:43,293 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,295 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 04:02:38] 2026-03-04 03:01:43,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,296 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 04:02:38] 2026-03-04 03:01:43,296 | INFO     | job 7036184459 has completed (purged errors)
[2026-03-04 04:02:38] 2026-03-04 03:01:43,296 | INFO     | overall cleanup function is called
[2026-03-04 04:02:38] 2026-03-04 03:01:44,305 | INFO     | --- collectZombieJob: --- 10, [25280]
[2026-03-04 04:02:38] 2026-03-04 03:01:44,305 | INFO     | zombie collector waiting for pid 25280
[2026-03-04 04:02:38] 2026-03-04 03:01:44,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 04:02:38] 2026-03-04 03:01:44,305 | INFO     | collected zombie processes
[2026-03-04 04:02:38] 2026-03-04 03:01:44,306 | INFO     | will attempt to kill all subprocesses of pid=25280
[2026-03-04 04:02:38] 2026-03-04 03:01:44,386 | INFO     | process IDs to be killed: [25280] (in reverse order)
[2026-03-04 04:02:38] 2026-03-04 03:01:45,232 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 04:02:38] 2026-03-04 03:01:45,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 04:02:38] 2026-03-04 03:01:45,235 | INFO     | did not find any defunct processes belonging to 25280
[2026-03-04 04:02:38] 2026-03-04 03:01:45,236 | INFO     | did not find any defunct processes belonging to 25280
[2026-03-04 04:02:38] 2026-03-04 03:01:45,237 | INFO     | ready for new job
[2026-03-04 04:02:38] 2026-03-04 03:01:45,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 04:02:38] 2026-03-04 03:01:45,239 | INFO     | **************************************
[2026-03-04 04:02:38] 2026-03-04 03:01:45,239 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 04:02:38] 2026-03-04 03:01:45,239 | INFO     | **************************************
[2026-03-04 04:02:38] 2026-03-04 03:01:45,239 | INFO     | 
[2026-03-04 04:02:38] 2026-03-04 03:01:45,240 | INFO     | pilot is running in a VM
[2026-03-04 04:02:38] 2026-03-04 03:01:45,240 | INFO     | architecture information:
[2026-03-04 04:02:38] 2026-03-04 03:01:45,247 | INFO     | executing command: cat /etc/os-release
[2026-03-04 04:02:38] 2026-03-04 03:01:45,542 | INFO     | cat /etc/os-release:
[2026-03-04 04:02:38] NAME="CentOS Linux"
[2026-03-04 04:02:38] VERSION="7 (Core)"
[2026-03-04 04:02:38] ID="centos"
[2026-03-04 04:02:38] ID_LIKE="rhel fedora"
[2026-03-04 04:02:38] VERSION_ID="7"
[2026-03-04 04:02:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 04:02:38] ANSI_COLOR="0;31"
[2026-03-04 04:02:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 04:02:38] HOME_URL="https://www.centos.org/"
[2026-03-04 04:02:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 04:02:38] 
[2026-03-04 04:02:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 04:02:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 04:02:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 04:02:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 04:02:38] 
[2026-03-04 04:02:38] 2026-03-04 03:01:45,543 | INFO     | **************************************
[2026-03-04 04:02:38] 2026-03-04 03:01:46,046 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-04 04:02:38] 2026-03-04 03:01:46,376 | INFO     | sufficient remaining disk space (496394829824 B)
[2026-03-04 04:02:38] 2026-03-04 03:01:46,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 04:02:38] 2026-03-04 03:01:46,377 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 04:02:38] 2026-03-04 03:01:46,377 | INFO     | update_server=False
[2026-03-04 04:02:38] 2026-03-04 03:01:46,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 04:02:38] 2026-03-04 03:01:46,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:02:38] 2026-03-04 03:01:46,378 | INFO     | aborting loop
[2026-03-04 04:02:38] 2026-03-04 03:01:46,419 | INFO     | all data control threads have been joined
[2026-03-04 04:02:38] 2026-03-04 03:01:46,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 04:02:38] 2026-03-04 03:01:47,383 | INFO     | [job] retrieve thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:47,384 | INFO     | [job] job monitor thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:47,386 | INFO     | all payload control threads have been joined
[2026-03-04 04:02:38] 2026-03-04 03:01:47,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 04:02:38] 2026-03-04 03:01:47,417 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:47,425 | INFO     | [data] control thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:47,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:02:38] 2026-03-04 03:01:47,503 | INFO     | [data] copytool_in thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:47,688 | INFO     | [payload] failed_post thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:47,810 | INFO     | all job control threads have been joined
[2026-03-04 04:02:38] 2026-03-04 03:01:47,969 | INFO     | [job] validate thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,121 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,392 | INFO     | [payload] control thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,507 | INFO     | [job] queue monitor thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,610 | INFO     | [data] copytool_out thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,690 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,704 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,713 | INFO     | [payload] validate_post thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:48,816 | INFO     | [job] control thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:01:51,424 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 04:02:38] 2026-03-04 03:02:15,656 | INFO     | PID=20828 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 04:02:38] 2026-03-04 03:02:15,657 | INFO     | .. there are 2 such processes running
[2026-03-04 04:02:38] 2026-03-04 03:02:15,657 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 04:02:38] 2026-03-04 03:02:15,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 04:02:38] 2026-03-04 03:02:15,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 04:02:38] 2026-03-04 03:02:26,338 | INFO     | [monitor] cgroup control has ended
[2026-03-04 04:02:38] 2026-03-04 03:02:27,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093301520192)>', '<ExcThread(monitor, started 140092572169984)>']
[2026-03-04 04:02:38] 2026-03-04 03:02:27,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 04:02:38] 2026-03-04 03:02:27,729 | INFO     | [monitor] control thread has ended
[2026-03-04 04:02:38] 2026-03-04 03:02:32,513 | INFO     | all workflow threads have been joined
[2026-03-04 04:02:38] 2026-03-04 03:02:32,513 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 04:02:38] 2026-03-04 03:02:32,513 | INFO     | traces error code: 0
[2026-03-04 04:02:38] 2026-03-04 03:02:32,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 04:02:38] 2026-03-04 03:02:32,949 [wrapper] ==== pilot stdout END ====
[2026-03-04 04:02:38] 2026-03-04 03:02:33,054 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 04:02:38] 2026-03-04 03:02:33,174 [wrapper] pilotpid: 20828
[2026-03-04 04:02:38] 2026-03-04 03:02:33,285 [wrapper] Pilot exit status: 0
[2026-03-04 04:02:38] 2026-03-04 03:02:33,704 [wrapper] pandaids: 7036184459
[2026-03-04 04:02:38] 2026-03-04 03:02:34,878 [wrapper] cleanup supervisor_pilot 31613 20829
[2026-03-04 04:02:38] 2026-03-04 03:02:34,935 [wrapper] Test setup, not cleaning
[2026-03-04 04:02:38] 2026-03-04 03:02:34,992 [wrapper] apfmon messages muted
[2026-03-04 04:02:38] 2026-03-04 03:02:35,077 [wrapper] ==== wrapper stdout END ====
[2026-03-04 04:02:38] 2026-03-04 03:02:35,181 [wrapper] ==== wrapper stderr END ====
[2026-03-04 04:02:38]  *** Error codes and diagnostics ***
[2026-03-04 04:02:38]     "exeErrorCode": 0,
[2026-03-04 04:02:38]     "exeErrorDiag": "",
[2026-03-04 04:02:38]     "pilotErrorCode": 0,
[2026-03-04 04:02:38]     "pilotErrorDiag": "",
[2026-03-04 04:02:38]  *** Listing of results directory ***
[2026-03-04 04:02:38] total 518560
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-04 04:02:38] -rwx------. 1 boinc boinc     36322 Mar  3 05:47 runpilot2-wrapper.sh
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc      5111 Mar  3 05:49 queuedata.json
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc       100 Mar  3 23:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 04:02:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 23:17 run_atlas
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc       105 Mar  3 23:17 job.xml
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc      6391 Mar  3 23:17 init_data.xml
[2026-03-04 04:02:38] -rw-r--r--. 2 boinc boinc 289468705 Mar  3 23:17 EVNT.48220197._000108.pool.root.1
[2026-03-04 04:02:38] -rw-r--r--. 2 boinc boinc     15845 Mar  3 23:17 start_atlas.sh
[2026-03-04 04:02:38] drwxrwx--x. 2 boinc boinc        68 Mar  3 23:17 shared
[2026-03-04 04:02:38] -rw-r--r--. 2 boinc boinc    597974 Mar  3 23:17 input.tar.gz
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc         0 Mar  3 23:17 boinc_lockfile
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc      2567 Mar  3 23:17 pandaJob.out
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc       415 Mar  3 23:23 workernode_map.json
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc    998484 Mar  3 23:23 agis_schedconf.cvmfs.json
[2026-03-04 04:02:38] drwx------. 5 boinc boinc      4096 Mar  3 23:23 pilot3
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc 231920692 Mar  4 04:00 HITS.48838577._002832.pool.root.1
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc       531 Mar  4 04:00 boinc_task_state.xml
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc        95 Mar  4 04:01 pilot_heartbeat.json
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc      1010 Mar  4 04:01 memory_monitor_summary.json
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc   1516092 Mar  4 04:01 agis_ddmendpoints.agis.ALL.json
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc    507843 Mar  4 04:01 log.48838577._002832.job.log.tgz.1
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc      6318 Mar  4 04:01 heartbeat.json
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc      4881 Mar  4 04:02 pilotlog.txt
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc        28 Mar  4 04:02 wrapper_checkpoint.txt
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc      8192 Mar  4 04:02 boinc_mmap_file
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc   2340711 Mar  4 04:02 log.48838577._002832.job.log.1
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc       357 Mar  4 04:02 output.list
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc       620 Mar  4 04:02 runtime_log
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc   2867200 Mar  4 04:02 result.tar.gz
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc      8832 Mar  4 04:02 runtime_log.err
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc       655 Mar  4 04:02 meiNDmgqWH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7bFLDmBcwv0m.diag
[2026-03-04 04:02:38] -rw-r--r--. 1 boinc boinc     20737 Mar  4 04:02 stderr.txt
[2026-03-04 04:02:38] HITS file was successfully produced:
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc 231920692 Mar  4 04:00 shared/HITS.pool.root.1
[2026-03-04 04:02:38]  *** Contents of shared directory: ***
[2026-03-04 04:02:38] total 512576
[2026-03-04 04:02:38] -rw-r--r--. 2 boinc boinc 289468705 Mar  3 23:17 ATLAS.root_0
[2026-03-04 04:02:38] -rw-r--r--. 2 boinc boinc     15845 Mar  3 23:17 start_atlas.sh
[2026-03-04 04:02:38] -rw-r--r--. 2 boinc boinc    597974 Mar  3 23:17 input.tar.gz
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc 231920692 Mar  4 04:00 HITS.pool.root.1
[2026-03-04 04:02:38] -rw-------. 1 boinc boinc   2867200 Mar  4 04:02 result.tar.gz
04:02:39 (16841): run_atlas exited; CPU time 62668.392829
04:02:39 (16841): called boinc_finish(0)

</stderr_txt>
]]>

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