Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:38:34 (3598780): wrapper (7.7.26015): starting
05:38:34 (3598780): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 05:38:34] Arguments: --nthreads 12
[2026-03-03 05:38:34] Threads: 12
[2026-03-03 05:38:34] Checking for CVMFS
[2026-03-03 05:38:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 05:38:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 05:38:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 05:38:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 05:38:35] 2.11.5.0 3817131 167836 344288 156846 0 263 36413105 45568000 17512 130560 0 1478366100 99.804 868689737 21992 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-03 05:38:35] CVMFS is ok
[2026-03-03 05:38:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 05:38:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 05:38:35] Further information can be found at the LHC@home message board.
[2026-03-03 05:38:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 05:38:35] Checking for apptainer binary...
[2026-03-03 05:38:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 05:38:35] Running /usr/bin/apptainer --version
[2026-03-03 05:38:35] apptainer version 1.4.1-1.el9
[2026-03-03 05:38:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 05:38:35] wns0035.triumf.lcg
[2026-03-03 05:38:35] apptainer works
[2026-03-03 05:38:35] Set ATHENA_PROC_NUMBER=12
[2026-03-03 05:38:35] Set ATHENA_CORE_NUMBER=12
[2026-03-03 05:38:35] Starting ATLAS job with PandaID=7036223062
[2026-03-03 05:38:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 05:41:56]  *** The last 200 lines of the pilot log: ***
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | INFO     | will not add max space = 0 B to job metrics
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | wrong length of table data, x=[1772545148.0], y=[931.0] (must be same and length>=4)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | INFO     | could have reported an average CPU frequency of 2644 MHz (4 samples)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | ..............................
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . Timing measurements:
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . get job = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . initial setup = 6 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . payload setup = 4 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . stage-in = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . payload execution = 15 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . stage-out = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . log creation = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | ..............................
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036223062/pilotlog.txt
[2026-03-03 05:41:56] 2026-03-03 13:41:22,494 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-03 05:41:56] - Log from pilotlog.txt -
[2026-03-03 05:41:56] 2026-03-03 13:41:22,479 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 05:41:56] 2026-03-03 13:41:22,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | found no stored workdir sizes
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | INFO     | will not add max space = 0 B to job metrics
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | wrong length of table data, x=[1772545148.0], y=[931.0] (must be same and length>=4)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | INFO     | could have reported an average CPU frequency of 2644 MHz (4 samples)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | ..............................
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . Timing measurements:
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . get job = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . initial setup = 6 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . payload setup = 4 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . stage-in = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . payload execution = 15 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . stage-out = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . log creation = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | ..............................
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036223062/pilotlog.txt
[2026-03-03 05:41:56] 2026-03-03 13:41:22,494 | WARNING  | 
[2026-03-03 05:41:56] [begin log extracts]
[2026-03-03 05:41:56] - Log from pilotlog.txt -
[2026-03-03 05:41:56] 2026-03-03 13:41:22,479 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 05:41:56] 2026-03-03 13:41:22,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | found no stored workdir sizes
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | INFO     | will not add max space = 0 B to job metrics
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | WARNING  | wrong length of table data, x=[1772545148.0], y=[931.0] (must be same and length>=4)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,480 | INFO     | could have reported an average CPU frequency of 2644 MHz (4 samples)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | ..............................
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . Timing measurements:
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . get job = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . initial setup = 6 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . payload setup = 4 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . stage-in = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . payload execution = 15 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . stage-out = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | . log creation = 0 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | ..............................
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 05:41:56] 2026-03-03 13:41:22,481 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036223062/pilotlog.txt
[2026-03-03 05:41:56] [end log extracts]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,495 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,495 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-03 05:41:56] 2026-03-03 13:41:22,935 | INFO     | 
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | job summary report
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | --------------------------------------------------
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | PanDA job id: 7036223062
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | task id: 48868979
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-03 05:39:15,569 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | pilot state: failed 
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | transexitcode: 65
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | exeerrorcode: 65
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | exitcode: 65
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | cpuconsumptiontime: 14 s
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | nevents: 0
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | neventsw: 0
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | pid: 3606997
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | pgrp: 3606997
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | corecount: 12
[2026-03-03 05:41:56] 2026-03-03 13:41:22,936 | INFO     | event service: False
[2026-03-03 05:41:56] 2026-03-03 13:41:22,937 | INFO     | sizes: {0: 2286898, 1: 2287104, 11: 2287132, 23: 2314712, 27: 2314712, 143: 2314878}
[2026-03-03 05:41:56] 2026-03-03 13:41:22,937 | INFO     | --------------------------------------------------
[2026-03-03 05:41:56] 2026-03-03 13:41:22,937 | INFO     | 
[2026-03-03 05:41:56] 2026-03-03 13:41:22,937 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | job 7036223062 has completed (purged errors)
[2026-03-03 05:41:56] 2026-03-03 13:41:22,956 | INFO     | overall cleanup function is called
[2026-03-03 05:41:56] 2026-03-03 13:41:23,588 | INFO     | PID=3602453 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 05:41:56] 2026-03-03 13:41:23,588 | INFO     | .. there are 28 such processes running
[2026-03-03 05:41:56] 2026-03-03 13:41:23,962 | INFO     | --- collectZombieJob: --- 10, [3606997]
[2026-03-03 05:41:56] 2026-03-03 13:41:23,963 | INFO     | zombie collector waiting for pid 3606997
[2026-03-03 05:41:56] 2026-03-03 13:41:23,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 05:41:56] 2026-03-03 13:41:23,963 | INFO     | collected zombie processes
[2026-03-03 05:41:56] 2026-03-03 13:41:23,963 | INFO     | will attempt to kill all subprocesses of pid=3606997
[2026-03-03 05:41:56] 2026-03-03 13:41:24,130 | INFO     | process IDs to be killed: [3606997] (in reverse order)
[2026-03-03 05:41:56] 2026-03-03 13:41:24,197 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 05:41:56] 2026-03-03 13:41:24,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 05:41:56] 2026-03-03 13:41:24,205 | INFO     | did not find any defunct processes belonging to 3606997
[2026-03-03 05:41:56] 2026-03-03 13:41:24,212 | INFO     | did not find any defunct processes belonging to 3606997
[2026-03-03 05:41:56] 2026-03-03 13:41:24,212 | INFO     | ready for new job
[2026-03-03 05:41:56] 2026-03-03 13:41:24,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 05:41:56] 2026-03-03 13:41:24,214 | INFO     | **************************************
[2026-03-03 05:41:56] 2026-03-03 13:41:24,214 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 05:41:56] 2026-03-03 13:41:24,214 | INFO     | **************************************
[2026-03-03 05:41:56] 2026-03-03 13:41:24,214 | INFO     | 
[2026-03-03 05:41:56] 2026-03-03 13:41:24,216 | INFO     | architecture information:
[2026-03-03 05:41:56] 2026-03-03 13:41:24,216 | INFO     | executing command: cat /etc/os-release
[2026-03-03 05:41:56] 2026-03-03 13:41:24,226 | INFO     | cat /etc/os-release:
[2026-03-03 05:41:56] NAME="CentOS Linux"
[2026-03-03 05:41:56] VERSION="7 (Core)"
[2026-03-03 05:41:56] ID="centos"
[2026-03-03 05:41:56] ID_LIKE="rhel fedora"
[2026-03-03 05:41:56] VERSION_ID="7"
[2026-03-03 05:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 05:41:56] ANSI_COLOR="0;31"
[2026-03-03 05:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 05:41:56] HOME_URL="https://www.centos.org/"
[2026-03-03 05:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 05:41:56] 
[2026-03-03 05:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 05:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 05:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 05:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 05:41:56] 
[2026-03-03 05:41:56] 2026-03-03 13:41:24,227 | INFO     | **************************************
[2026-03-03 05:41:56] 2026-03-03 13:41:24,730 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-03 05:41:56] 2026-03-03 13:41:24,741 | INFO     | sufficient remaining disk space (2073847398400 B)
[2026-03-03 05:41:56] 2026-03-03 13:41:24,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 05:41:56] 2026-03-03 13:41:24,741 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 05:41:56] 2026-03-03 13:41:24,742 | INFO     | update_server=False
[2026-03-03 05:41:56] 2026-03-03 13:41:24,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 05:41:56] 2026-03-03 13:41:24,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:41:56] 2026-03-03 13:41:24,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 05:41:56] 2026-03-03 13:41:24,742 | INFO     | aborting loop
[2026-03-03 05:41:56] 2026-03-03 13:41:24,797 | INFO     | all job control threads have been joined
[2026-03-03 05:41:56] 2026-03-03 13:41:25,587 | INFO     | all data control threads have been joined
[2026-03-03 05:41:56] 2026-03-03 13:41:25,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 05:41:56] 2026-03-03 13:41:25,746 | INFO     | [job] retrieve thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:25,748 | INFO     | [job] job monitor thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:25,757 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:25,802 | INFO     | [job] control thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:25,803 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:25,888 | INFO     | all payload control threads have been joined
[2026-03-03 05:41:56] 2026-03-03 13:41:25,888 | INFO     | [data] copytool_in thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:26,449 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:26,591 | INFO     | [data] control thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:26,771 | INFO     | [payload] failed_post thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:26,894 | INFO     | [payload] control thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:26,980 | INFO     | [job] validate thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:27,161 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:27,274 | INFO     | [payload] validate_post thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:27,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:41:56] 2026-03-03 13:41:27,719 | INFO     | [data] copytool_out thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:28,569 | INFO     | [job] queue monitor thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:28,749 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 05:41:56] 2026-03-03 13:41:47,795 | INFO     | [monitor] cgroup control has ended
[2026-03-03 05:41:56] 2026-03-03 13:41:49,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087249053504)>', '<ExcThread(monitor, started 140086716913408)>']
[2026-03-03 05:41:56] 2026-03-03 13:41:54,265 | INFO     | all workflow threads have been joined
[2026-03-03 05:41:56] 2026-03-03 13:41:54,265 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 05:41:56] 2026-03-03 13:41:54,265 | INFO     | traces error code: 0
[2026-03-03 05:41:56] 2026-03-03 13:41:54,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 05:41:56] 2026-03-03 13:41:55,829 | INFO     | PID=3602453 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 05:41:56] 2026-03-03 13:41:55,829 | INFO     | .. there are 28 such processes running
[2026-03-03 05:41:56] 2026-03-03 13:41:55,830 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 05:41:56] 2026-03-03 13:41:55,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 05:41:56] 2026-03-03 13:41:55,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 05:41:56] 2026-03-03 13:41:55,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 05:41:56] 2026-03-03 13:41:55,830 | INFO     | [monitor] control thread has ended
[2026-03-03 05:41:56] 2026-03-03 13:41:55,974 [wrapper] ==== pilot stdout END ====
[2026-03-03 05:41:56] 2026-03-03 13:41:55,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 05:41:56] 2026-03-03 13:41:55,979 [wrapper] pilotpid: 3602453
[2026-03-03 05:41:56] 2026-03-03 13:41:55,981 [wrapper] Pilot exit status: 0
[2026-03-03 05:41:56] 2026-03-03 13:41:55,990 [wrapper] pandaids: 7036223062
[2026-03-03 05:41:56] 2026-03-03 13:41:56,034 [wrapper] cleanup supervisor_pilot 3602459 3602454
[2026-03-03 05:41:56] 2026-03-03 13:41:56,036 [wrapper] Test setup, not cleaning
[2026-03-03 05:41:56] 2026-03-03 13:41:56,039 [wrapper] apfmon messages muted
[2026-03-03 05:41:56] 2026-03-03 13:41:56,041 [wrapper] ==== wrapper stdout END ====
[2026-03-03 05:41:56] 2026-03-03 13:41:56,043 [wrapper] ==== wrapper stderr END ====
[2026-03-03 05:41:56]  *** Error codes and diagnostics ***
[2026-03-03 05:41:56]     "exeErrorCode": 65,
[2026-03-03 05:41:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 05:41:56]     "pilotErrorCode": 1305,
[2026-03-03 05:41:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 05:41:56]  *** Listing of results directory ***
[2026-03-03 05:41:56] total 291456
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc    584627 Mar  3 00:25 pilot3.tar.gz
[2026-03-03 05:41:56] -rwx------. 1 boinc boinc     36322 Mar  3 00:29 runpilot2-wrapper.sh
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc      5111 Mar  3 00:30 queuedata.json
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc       100 Mar  3 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 05:41:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 05:38 run_atlas
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc       105 Mar  3 05:38 job.xml
[2026-03-03 05:41:56] -rw-r--r--. 2 boinc boinc 294324235 Mar  3 05:38 EVNT.48717036._000015.pool.root.1
[2026-03-03 05:41:56] -rw-r--r--. 2 boinc boinc     15845 Mar  3 05:38 start_atlas.sh
[2026-03-03 05:41:56] drwxrwx--x. 2 boinc boinc      4096 Mar  3 05:38 shared
[2026-03-03 05:41:56] -rw-r--r--. 2 boinc boinc    597957 Mar  3 05:38 input.tar.gz
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc      6594 Mar  3 05:38 init_data.xml
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc         0 Mar  3 05:38 boinc_lockfile
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc      2595 Mar  3 05:38 pandaJob.out
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc    998434 Mar  3 05:38 agis_schedconf.cvmfs.json
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc   1516104 Mar  3 05:38 agis_ddmendpoints.agis.ALL.json
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc       445 Mar  3 05:38 workernode_map.json
[2026-03-03 05:41:56] drwx------. 5 boinc boinc      4096 Mar  3 05:38 pilot3
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc       523 Mar  3 05:39 boinc_task_state.xml
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc       944 Mar  3 05:39 memory_monitor_summary.json
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc     20391 Mar  3 05:39 log.48868979._000354.job.log.tgz.1
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc      7004 Mar  3 05:41 heartbeat.json
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc        95 Mar  3 05:41 pilot_heartbeat.json
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc       823 Mar  3 05:41 pilotlog.txt
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc      8192 Mar  3 05:41 boinc_mmap_file
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc        22 Mar  3 05:41 wrapper_checkpoint.txt
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc     80591 Mar  3 05:41 log.48868979._000354.job.log.1
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc       188 Mar  3 05:41 output.list
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc       620 Mar  3 05:41 runtime_log
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc    122880 Mar  3 05:41 result.tar.gz
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc      8635 Mar  3 05:41 runtime_log.err
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc       644 Mar  3 05:41 28ANDmtIaH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlDGLDmdoMwWm.diag
[2026-03-03 05:41:56] -rw-r--r--. 1 boinc boinc     21750 Mar  3 05:41 stderr.txt
[2026-03-03 05:41:56] No HITS result produced
[2026-03-03 05:41:56]  *** Contents of shared directory: ***
[2026-03-03 05:41:56] total 288152
[2026-03-03 05:41:56] -rw-r--r--. 2 boinc boinc 294324235 Mar  3 05:38 ATLAS.root_0
[2026-03-03 05:41:56] -rw-r--r--. 2 boinc boinc     15845 Mar  3 05:38 start_atlas.sh
[2026-03-03 05:41:56] -rw-r--r--. 2 boinc boinc    597957 Mar  3 05:38 input.tar.gz
[2026-03-03 05:41:56] -rw-------. 1 boinc boinc    122880 Mar  3 05:41 result.tar.gz
05:41:57 (3598780): run_atlas exited; CPU time 16.937101
05:41:57 (3598780): called boinc_finish(0)

</stderr_txt>
]]>

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