Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:37:01 (1074728): wrapper (7.7.26015): starting
00:37:01 (1074728): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 00:37:01] Arguments: --nthreads 4
[2026-03-05 00:37:01] Threads: 4
[2026-03-05 00:37:01] Checking for CVMFS
[2026-03-05 00:37:01] No cvmfs_config command found, will try listing directly
[2026-03-05 00:37:01] CVMFS is ok
[2026-03-05 00:37:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 00:37:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 00:37:01] Further information can be found at the LHC@home message board.
[2026-03-05 00:37:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 00:37:01] Checking for apptainer binary...
[2026-03-05 00:37:01] which: no apptainer in ((null))
[2026-03-05 00:37:01] apptainer is not installed, using version from CVMFS
[2026-03-05 00:37:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 00:37:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-05 00:37:01] apptainer works
[2026-03-05 00:37:01] Set ATHENA_PROC_NUMBER=4
[2026-03-05 00:37:01] Set ATHENA_CORE_NUMBER=4
[2026-03-05 00:37:02] Starting ATLAS job with PandaID=7035796883
[2026-03-05 00:37:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:27:19 (1396479): wrapper (7.7.26015): starting
01:27:19 (1396479): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 01:27:19] Arguments: --nthreads 4
[2026-03-05 01:27:19] Threads: 4
[2026-03-05 01:27:19] This job has been restarted, cleaning up previous attempt
[2026-03-05 01:27:19] Checking for CVMFS
[2026-03-05 01:27:19] No cvmfs_config command found, will try listing directly
[2026-03-05 01:27:19] CVMFS is ok
[2026-03-05 01:27:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 01:27:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 01:27:19] Further information can be found at the LHC@home message board.
[2026-03-05 01:27:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 01:27:19] Checking for apptainer binary...
[2026-03-05 01:27:19] which: no apptainer in ((null))
[2026-03-05 01:27:19] apptainer is not installed, using version from CVMFS
[2026-03-05 01:27:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 01:27:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-05 01:27:19] apptainer works
[2026-03-05 01:27:19] Set ATHENA_PROC_NUMBER=4
[2026-03-05 01:27:19] Set ATHENA_CORE_NUMBER=4
[2026-03-05 01:27:19] Starting ATLAS job with PandaID=7035796883
[2026-03-05 01:27:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 02:52:39]  *** The last 200 lines of the pilot log: ***
[2026-03-05 02:52:39]  is_altstaged=None
[2026-03-05 02:52:39]  is_tar=False
[2026-03-05 02:52:39]  lfn=log.48845477._000028.job.log.tgz.1
[2026-03-05 02:52:39]  mtime=0
[2026-03-05 02:52:39]  protocol_id=None
[2026-03-05 02:52:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 02:52:39]  replicas=None
[2026-03-05 02:52:39]  scope=mc23_13p6TeV
[2026-03-05 02:52:39]  status=None
[2026-03-05 02:52:39]  status_code=0
[2026-03-05 02:52:39]  storage_token=
[2026-03-05 02:52:39]  surl=/var/lib/boinc/var/slot76/slots/1/PanDA_Pilot-7035796883/log.48845477._000028.job.log.tgz.1
[2026-03-05 02:52:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/63/log.48845477._000028.job.log.tgz.1
[2026-03-05 02:52:39]  workdir=None
[2026-03-05 02:52:39] ]
[2026-03-05 02:52:39] 2026-03-05 01:51:04,420 | INFO     | transferring file log.48845477._000028.job.log.tgz.1 from /var/lib/boinc/var/slot76/slots/1/PanDA_Pilot-7035796883/log.48845477._000028.job.log.tgz.1 to /var/lib/b
[2026-03-05 02:52:39] 2026-03-05 01:51:04,420 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot76/slots/1/PanDA_Pilot-7035796883/log.48845477._000028.job.log.tgz.1 /var/lib/boinc/var/slot76/slots/1/lo
[2026-03-05 02:52:39] 2026-03-05 01:51:04,431 | WARNING  | process 1410645 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 02:52:39] 2026-03-05 01:51:04,432 | INFO     | using path: /var/lib/boinc/var/slot76/slots/1/PanDA_Pilot-7035796883/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 02:52:39] 2026-03-05 01:51:04,437 | INFO     | adding to output.list: log.48845477._000028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/63/log.48845477._000028.job.log.tg
[2026-03-05 02:52:39] 2026-03-05 01:51:04,438 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 02:52:39] 2026-03-05 01:51:04,438 | INFO     | summary of transferred files:
[2026-03-05 02:52:39] 2026-03-05 01:51:04,438 | INFO     |  -- lfn=log.48845477._000028.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 02:52:39] 2026-03-05 01:51:04,438 | INFO     | stage-out finished correctly
[2026-03-05 02:52:39] 2026-03-05 01:51:04,488 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 02:52:39] 2026-03-05 01:51:04,835 | INFO     | time since job start (5017s) is within the limit (349056.0s)
[2026-03-05 02:52:39] 2026-03-05 01:51:04,986 | INFO     | number of running child processes to parent process 1410645: 1
[2026-03-05 02:52:39] 2026-03-05 01:51:04,986 | INFO     | maximum number of monitored processes: 6
[2026-03-05 02:52:39] 2026-03-05 01:51:06,820 | INFO     | job 7035796883 has state=finished
[2026-03-05 02:52:39] 2026-03-05 01:51:06,821 | INFO     | preparing for final server update for job 7035796883 in state='finished'
[2026-03-05 02:52:39] 2026-03-05 01:51:06,821 | INFO     | reading metadata from: /var/lib/boinc/var/slot76/slots/1/PanDA_Pilot-7035796883/jobReport.json
[2026-03-05 02:52:39] 2026-03-05 01:51:06,823 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot76/slots/1/workernode_map.json
[2026-03-05 02:52:39] 2026-03-05 01:51:06,823 | INFO     | this job has now completed (state=finished)
[2026-03-05 02:52:39] 2026-03-05 01:51:06,823 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 02:52:39] 2026-03-05 01:51:06,823 | INFO     | log transfer has been attempted: DONE
[2026-03-05 02:52:39] 2026-03-05 01:51:06,823 | INFO     | job 7035796883 has finished - writing final server update
[2026-03-05 02:52:39] 2026-03-05 01:51:06,823 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1353676/.job.ad'
[2026-03-05 02:52:39] 2026-03-05 01:51:06,823 | INFO     | total number of processed events: 400 (read)
[2026-03-05 02:52:39] 2026-03-05 01:51:06,841 | INFO     | time since job start (5019s) is within the limit (349056.0s)
[2026-03-05 02:52:39] 2026-03-05 01:51:06,842 | INFO     | using path: /var/lib/boinc/var/slot76/slots/1/PanDA_Pilot-7035796883/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 02:52:39] 2026-03-05 01:51:06,842 | INFO     | extracted standard info from prmon json
[2026-03-05 02:52:39] 2026-03-05 01:51:06,842 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 02:52:39] 2026-03-05 01:51:06,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 02:52:39] 2026-03-05 01:51:06,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 02:52:39] 2026-03-05 01:51:06,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 02:52:39] 2026-03-05 01:51:06,844 | INFO     | fitting pss+swap vs Time
[2026-03-05 02:52:39] 2026-03-05 01:51:06,844 | INFO     | sum of square deviations: 130793150.0
[2026-03-05 02:52:39] 2026-03-05 01:51:06,844 | INFO     | sum of deviations: -566248420.9999995
[2026-03-05 02:52:39] 2026-03-05 01:51:06,844 | INFO     | mean x: 1772673030.0
[2026-03-05 02:52:39] 2026-03-05 01:51:06,844 | INFO     | mean y: 2351879.453333333
[2026-03-05 02:52:39] 2026-03-05 01:51:06,844 | INFO     | intersect: 7676861623.937542
[2026-03-05 02:52:39] 2026-03-05 01:51:06,844 | INFO     | chi2: 0.00031934019640710856
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | current memory leak: -4.33 B/s (using 75 data points, chi2=0.00)
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | could have reported an average CPU frequency of 3609 MHz (6 samples)
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | ..............................
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . Timing measurements:
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . get job = 0 s
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . initial setup = 0 s
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . payload setup = 5 s
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . stage-in = 0 s
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . payload execution = 4996 s
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . stage-out = 0 s
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | . log creation = 0 s
[2026-03-05 02:52:39] 2026-03-05 01:51:06,845 | INFO     | ..............................
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | 
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | job summary report
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | --------------------------------------------------
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | PanDA job id: 7035796883
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | task id: 48845477
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | errors: (none)
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | pilot state: finished 
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | transexitcode: 0
[2026-03-05 02:52:39] 2026-03-05 01:51:07,094 | INFO     | exeerrorcode: 0
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | exeerrordiag: 
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | exitcode: 0
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | exitmsg: OK
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | cpuconsumptiontime: 19185 s
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | nevents: 400
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | neventsw: 0
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | pid: 1410645
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | pgrp: 1410645
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | corecount: 4
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | event service: False
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | sizes: {0: 2295581, 1: 2295985, 11: 2295985, 5005: 2322317, 5006: 2331392, 5009: 2331530}
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | --------------------------------------------------
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | 
[2026-03-05 02:52:39] 2026-03-05 01:51:07,095 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/1
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,115 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 02:52:39] 2026-03-05 01:51:07,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,115 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 02:52:39] 2026-03-05 01:51:07,115 | INFO     | job 7035796883 has completed (purged errors)
[2026-03-05 02:52:39] 2026-03-05 01:51:07,115 | INFO     | overall cleanup function is called
[2026-03-05 02:52:39] 2026-03-05 01:51:08,121 | INFO     | --- collectZombieJob: --- 10, [1410645]
[2026-03-05 02:52:39] 2026-03-05 01:51:08,121 | INFO     | zombie collector waiting for pid 1410645
[2026-03-05 02:52:39] 2026-03-05 01:51:08,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 02:52:39] 2026-03-05 01:51:08,121 | INFO     | collected zombie processes
[2026-03-05 02:52:39] 2026-03-05 01:51:08,121 | INFO     | will attempt to kill all subprocesses of pid=1410645
[2026-03-05 02:52:39] 2026-03-05 01:51:08,593 | INFO     | process IDs to be killed: [1410645] (in reverse order)
[2026-03-05 02:52:39] 2026-03-05 01:51:08,821 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 02:52:39] 2026-03-05 01:51:08,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 02:52:39] 2026-03-05 01:51:08,852 | INFO     | did not find any defunct processes belonging to 1410645
[2026-03-05 02:52:39] 2026-03-05 01:51:08,882 | INFO     | did not find any defunct processes belonging to 1410645
[2026-03-05 02:52:39] 2026-03-05 01:51:08,882 | INFO     | ready for new job
[2026-03-05 02:52:39] 2026-03-05 01:51:08,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 02:52:39] 2026-03-05 01:51:08,883 | INFO     | **************************************
[2026-03-05 02:52:39] 2026-03-05 01:51:08,883 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 02:52:39] 2026-03-05 01:51:08,883 | INFO     | **************************************
[2026-03-05 02:52:39] 2026-03-05 01:51:08,883 | INFO     | 
[2026-03-05 02:52:39] 2026-03-05 01:51:08,889 | INFO     | architecture information:
[2026-03-05 02:52:39] 2026-03-05 01:51:08,889 | INFO     | executing command: cat /etc/os-release
[2026-03-05 02:52:39] 2026-03-05 01:51:08,904 | INFO     | cat /etc/os-release:
[2026-03-05 02:52:39] NAME="CentOS Linux"
[2026-03-05 02:52:39] VERSION="7 (Core)"
[2026-03-05 02:52:39] ID="centos"
[2026-03-05 02:52:39] ID_LIKE="rhel fedora"
[2026-03-05 02:52:39] VERSION_ID="7"
[2026-03-05 02:52:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 02:52:39] ANSI_COLOR="0;31"
[2026-03-05 02:52:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 02:52:39] HOME_URL="https://www.centos.org/"
[2026-03-05 02:52:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 02:52:39] 
[2026-03-05 02:52:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 02:52:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 02:52:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 02:52:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 02:52:39] 
[2026-03-05 02:52:39] 2026-03-05 01:51:08,904 | INFO     | **************************************
[2026-03-05 02:52:39] 2026-03-05 01:51:09,407 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/1
[2026-03-05 02:52:39] 2026-03-05 01:51:09,422 | INFO     | sufficient remaining disk space (19401801728 B)
[2026-03-05 02:52:39] 2026-03-05 01:51:09,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 02:52:39] 2026-03-05 01:51:09,422 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 02:52:39] 2026-03-05 01:51:09,422 | INFO     | update_server=False
[2026-03-05 02:52:39] 2026-03-05 01:51:09,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 02:52:39] 2026-03-05 01:51:09,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 02:52:39] 2026-03-05 01:51:09,423 | INFO     | aborting loop
[2026-03-05 02:52:39] 2026-03-05 01:51:09,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 02:52:39] 2026-03-05 01:51:10,284 | INFO     | all job control threads have been joined
[2026-03-05 02:52:39] 2026-03-05 01:51:10,370 | INFO     | all data control threads have been joined
[2026-03-05 02:52:39] 2026-03-05 01:51:10,379 | INFO     | all payload control threads have been joined
[2026-03-05 02:52:39] 2026-03-05 01:51:10,427 | INFO     | [job] retrieve thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:10,428 | INFO     | [job] job monitor thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:10,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 02:52:39] 2026-03-05 01:51:10,612 | INFO     | [payload] failed_post thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,031 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,055 | INFO     | [job] validate thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,177 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,258 | INFO     | [payload] validate_post thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,289 | INFO     | [job] control thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,375 | INFO     | [data] control thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,384 | INFO     | [payload] control thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,549 | INFO     | [data] copytool_in thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,830 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:11,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 02:52:39] 2026-03-05 01:51:12,000 | INFO     | [data] copytool_out thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:12,910 | INFO     | [job] queue monitor thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:14,552 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:19,830 | INFO     | job.realtimelogging is not enabled
[2026-03-05 02:52:39] 2026-03-05 01:51:20,836 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 02:52:39] 2026-03-05 01:51:35,183 | INFO     | [monitor] cgroup control has ended
[2026-03-05 02:52:39] 2026-03-05 01:51:36,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23217696921408)>', '<ExcThread(monitor, started 23217459959552)>']
[2026-03-05 02:52:39] 2026-03-05 01:51:40,471 | INFO     | PID=1401129 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 02:52:39] 2026-03-05 01:51:40,471 | INFO     | .. there are 40 such processes running
[2026-03-05 02:52:39] 2026-03-05 01:51:40,474 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 02:52:39] 2026-03-05 01:51:40,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 02:52:39] 2026-03-05 01:51:40,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 02:52:39] 2026-03-05 01:51:40,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 02:52:39] 2026-03-05 01:51:40,475 | INFO     | [monitor] control thread has ended
[2026-03-05 02:52:39] 2026-03-05 01:51:41,813 | INFO     | all workflow threads have been joined
[2026-03-05 02:52:39] 2026-03-05 01:51:41,813 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 02:52:39] 2026-03-05 01:51:41,813 | INFO     | traces error code: 0
[2026-03-05 02:52:39] 2026-03-05 01:51:41,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 02:52:39] 2026-03-05 01:51:42,002 [wrapper] ==== pilot stdout END ====
[2026-03-05 02:52:39] 2026-03-05 01:51:42,005 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 02:52:39] 2026-03-05 01:51:42,007 [wrapper] pilotpid: 1401129
[2026-03-05 02:52:39] 2026-03-05 01:51:42,008 [wrapper] Pilot exit status: 0
[2026-03-05 02:52:39] 2026-03-05 01:51:42,015 [wrapper] pandaids: 7035796883 7035796883
[2026-03-05 02:52:39] 2026-03-05 01:51:42,148 [wrapper] cleanup supervisor_pilot 2042393 1401130
[2026-03-05 02:52:39] 2026-03-05 01:51:42,150 [wrapper] Test setup, not cleaning
[2026-03-05 02:52:39] 2026-03-05 01:51:42,153 [wrapper] apfmon messages muted
[2026-03-05 02:52:39] 2026-03-05 01:51:42,155 [wrapper] ==== wrapper stdout END ====
[2026-03-05 02:52:39] 2026-03-05 01:51:42,157 [wrapper] ==== wrapper stderr END ====
[2026-03-05 02:52:39]  *** Error codes and diagnostics ***
[2026-03-05 02:52:39]     "exeErrorCode": 0,
[2026-03-05 02:52:39]     "exeErrorDiag": "",
[2026-03-05 02:52:39]     "pilotErrorCode": 0,
[2026-03-05 02:52:39]     "pilotErrorDiag": "",
[2026-03-05 02:52:39]  *** Listing of results directory ***
[2026-03-05 02:52:39] total 733648
[2026-03-05 02:52:39] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc    584627 Mar  2 03:17 pilot3.tar.gz
[2026-03-05 02:52:39] -rwx------. 1 boinc boinc     36322 Mar  2 03:30 runpilot2-wrapper.sh
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc      5111 Mar  2 03:31 queuedata.json
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc       100 Mar  5 00:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 02:52:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 00:36 run_atlas
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc       105 Mar  5 00:36 job.xml
[2026-03-05 02:52:39] -rw-r--r--. 3 boinc boinc 275082635 Mar  5 00:37 EVNT.48450151._000002.pool.root.1
[2026-03-05 02:52:39] -rw-r--r--. 3 boinc boinc 275082635 Mar  5 00:37 ATLAS.root_0
[2026-03-05 02:52:39] -rw-r--r--. 2 boinc boinc     15845 Mar  5 00:37 start_atlas.sh
[2026-03-05 02:52:39] drwxrwx--x. 2 boinc boinc      4096 Mar  5 00:37 shared
[2026-03-05 02:52:39] -rw-r--r--. 2 boinc boinc    597988 Mar  5 00:37 input.tar.gz
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc         0 Mar  5 00:37 boinc_lockfile
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc   1521291 Mar  5 00:37 agis_ddmendpoints.agis.ALL.json
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc      2687 Mar  5 01:27 pandaJob.out
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc    997749 Mar  5 01:27 agis_schedconf.cvmfs.json
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc       444 Mar  5 01:27 workernode_map.json
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc      6708 Mar  5 01:27 init_data.xml
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc 195174767 Mar  5 02:50 HITS.48845477._000028.pool.root.1
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc        97 Mar  5 02:50 pilot_heartbeat.json
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc      1031 Mar  5 02:51 memory_monitor_summary.json
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc    256875 Mar  5 02:51 log.48845477._000028.job.log.tgz.1
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc       529 Mar  5 02:51 boinc_task_state.xml
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc      6342 Mar  5 02:51 heartbeat.json
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc      4901 Mar  5 02:51 pilotlog.txt
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc    730800 Mar  5 02:51 log.48845477._000028.job.log.1
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc       357 Mar  5 02:51 output.list
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc       620 Mar  5 02:51 runtime_log
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc   1003520 Mar  5 02:51 result.tar.gz
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc      9281 Mar  5 02:51 runtime_log.err
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc       788 Mar  5 02:51 AagMDm4D8G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMXALDmIvqsfm.diag
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc        27 Mar  5 02:52 wrapper_checkpoint.txt
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc      8192 Mar  5 02:52 boinc_mmap_file
[2026-03-05 02:52:39] -rw-r--r--. 1 boinc boinc     23278 Mar  5 02:52 stderr.txt
[2026-03-05 02:52:39] HITS file was successfully produced:
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc 195174767 Mar  5 02:50 shared/HITS.pool.root.1
[2026-03-05 02:52:39]  *** Contents of shared directory: ***
[2026-03-05 02:52:39] total 460828
[2026-03-05 02:52:39] -rw-r--r--. 3 boinc boinc 275082635 Mar  5 00:37 ATLAS.root_0
[2026-03-05 02:52:39] -rw-r--r--. 2 boinc boinc     15845 Mar  5 00:37 start_atlas.sh
[2026-03-05 02:52:39] -rw-r--r--. 2 boinc boinc    597988 Mar  5 00:37 input.tar.gz
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc 195174767 Mar  5 02:50 HITS.pool.root.1
[2026-03-05 02:52:39] -rw-------. 1 boinc boinc   1003520 Mar  5 02:51 result.tar.gz
02:52:40 (1396479): run_atlas exited; CPU time 19415.745569
02:52:40 (1396479): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN