Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:42:25 (2455078): wrapper (7.7.26015): starting
17:42:25 (2455078): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 17:42:25] Arguments: --nthreads 4
[2026-03-03 17:42:25] Threads: 4
[2026-03-03 17:42:25] Checking for CVMFS
[2026-03-03 17:42:25] No cvmfs_config command found, will try listing directly
[2026-03-03 17:42:25] CVMFS is ok
[2026-03-03 17:42:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 17:42:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 17:42:25] Further information can be found at the LHC@home message board.
[2026-03-03 17:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 17:42:25] Checking for apptainer binary...
[2026-03-03 17:42:25] which: no apptainer in ((null))
[2026-03-03 17:42:25] apptainer is not installed, using version from CVMFS
[2026-03-03 17:42:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 17:42:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-03 17:42:25] apptainer works
[2026-03-03 17:42:25] Set ATHENA_PROC_NUMBER=4
[2026-03-03 17:42:25] Set ATHENA_CORE_NUMBER=4
[2026-03-03 17:42:25] Starting ATLAS job with PandaID=7036184269
[2026-03-03 17:42:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 19:22:56]  *** The last 200 lines of the pilot log: ***
[2026-03-03 19:22:56]  status=None
[2026-03-03 19:22:56]  status_code=0
[2026-03-03 19:22:56]  storage_token=
[2026-03-03 19:22:56]  surl=/var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036184269/log.48838586._002475.job.log.tgz.1
[2026-03-03 19:22:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/53/log.48838586._002475.job.log.tgz.1
[2026-03-03 19:22:56]  workdir=None
[2026-03-03 19:22:56] ]
[2026-03-03 19:22:56] 2026-03-03 18:21:07,795 | INFO     | transferring file log.48838586._002475.job.log.tgz.1 from /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036184269/log.48838586._002475.job.log.tgz.1 to /var/lib/
[2026-03-03 19:22:56] 2026-03-03 18:21:07,796 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036184269/log.48838586._002475.job.log.tgz.1 /var/lib/boinc/var/slot244/slots/0/
[2026-03-03 19:22:56] 2026-03-03 18:21:07,811 | INFO     | adding to output.list: log.48838586._002475.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/53/log.48838586._002475.job.log.tg
[2026-03-03 19:22:56] 2026-03-03 18:21:07,812 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 19:22:56] 2026-03-03 18:21:07,812 | INFO     | summary of transferred files:
[2026-03-03 19:22:56] 2026-03-03 18:21:07,812 | INFO     |  -- lfn=log.48838586._002475.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 19:22:56] 2026-03-03 18:21:07,812 | INFO     | stage-out finished correctly
[2026-03-03 19:22:56] 2026-03-03 18:21:08,279 | INFO     | time since job start (5909s) is within the limit (349056.0s)
[2026-03-03 19:22:56] 2026-03-03 18:21:09,473 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 19:22:56] 2026-03-03 18:21:10,030 | INFO     | job 7036184269 has state=finished
[2026-03-03 19:22:56] 2026-03-03 18:21:10,030 | INFO     | preparing for final server update for job 7036184269 in state='finished'
[2026-03-03 19:22:56] 2026-03-03 18:21:10,031 | INFO     | reading metadata from: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036184269/jobReport.json
[2026-03-03 19:22:56] 2026-03-03 18:21:10,032 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot244/slots/0/workernode_map.json
[2026-03-03 19:22:56] 2026-03-03 18:21:10,032 | INFO     | this job has now completed (state=finished)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,032 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,032 | INFO     | log transfer has been attempted: DONE
[2026-03-03 19:22:56] 2026-03-03 18:21:10,032 | INFO     | job 7036184269 has finished - writing final server update
[2026-03-03 19:22:56] 2026-03-03 18:21:10,033 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19716/.job.ad'
[2026-03-03 19:22:56] 2026-03-03 18:21:10,033 | INFO     | total number of processed events: 400 (read)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,050 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036184269/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,051 | INFO     | extracted standard info from prmon json
[2026-03-03 19:22:56] 2026-03-03 18:21:10,051 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 19:22:56] 2026-03-03 18:21:10,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 19:22:56] 2026-03-03 18:21:10,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 19:22:56] 2026-03-03 18:21:10,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 19:22:56] 2026-03-03 18:21:10,052 | INFO     | fitting pss+swap vs Time
[2026-03-03 19:22:56] 2026-03-03 18:21:10,052 | INFO     | sum of square deviations: 226022842.5
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | sum of deviations: 557154205.5
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | mean x: 1772559199.5
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | mean y: 2346757.2333333334
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | intersect: -4367073614.511343
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | chi2: 0.000609387229349732
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | current memory leak: 2.47 B/s (using 90 data points, chi2=0.00)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | could have reported an average CPU frequency of 3649 MHz (7 samples)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | ..............................
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | . Timing measurements:
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | . get job = 0 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | . initial setup = 5 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | . payload setup = 5 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | . stage-in = 0 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | . payload execution = 5888 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,053 | INFO     | . stage-out = 0 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,054 | INFO     | . log creation = 0 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,054 | INFO     | ..............................
[2026-03-03 19:22:56] 2026-03-03 18:21:10,288 | INFO     | time since job start (5911s) is within the limit (349056.0s)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | 
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | job summary report
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | --------------------------------------------------
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | PanDA job id: 7036184269
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | task id: 48838586
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | errors: (none)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | pilot state: finished 
[2026-03-03 19:22:56] 2026-03-03 18:21:10,452 | INFO     | transexitcode: 0
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | exeerrorcode: 0
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | exeerrordiag: 
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | exitcode: 0
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | exitmsg: OK
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | cpuconsumptiontime: 22320 s
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | nevents: 400
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | neventsw: 0
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | pid: 2551520
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | pgrp: 2551520
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | corecount: 4
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | event service: False
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | sizes: {0: 2287033, 11: 2287033, 5897: 2313958, 5898: 2322980, 5899: 2323036, 5900: 2323230}
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | --------------------------------------------------
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | 
[2026-03-03 19:22:56] 2026-03-03 18:21:10,453 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-03 19:22:56] 2026-03-03 18:21:10,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | job 7036184269 has completed (purged errors)
[2026-03-03 19:22:56] 2026-03-03 18:21:10,473 | INFO     | overall cleanup function is called
[2026-03-03 19:22:56] 2026-03-03 18:21:11,480 | INFO     | --- collectZombieJob: --- 10, [2551520]
[2026-03-03 19:22:56] 2026-03-03 18:21:11,480 | INFO     | zombie collector waiting for pid 2551520
[2026-03-03 19:22:56] 2026-03-03 18:21:11,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 19:22:56] 2026-03-03 18:21:11,480 | INFO     | collected zombie processes
[2026-03-03 19:22:56] 2026-03-03 18:21:11,481 | INFO     | will attempt to kill all subprocesses of pid=2551520
[2026-03-03 19:22:56] 2026-03-03 18:21:12,704 | INFO     | process IDs to be killed: [2551520] (in reverse order)
[2026-03-03 19:22:56] 2026-03-03 18:21:12,810 | WARNING  | process 2551520 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 19:22:56] 2026-03-03 18:21:12,957 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 19:22:56] 2026-03-03 18:21:12,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 19:22:56] 2026-03-03 18:21:13,027 | INFO     | did not find any defunct processes belonging to 2551520
[2026-03-03 19:22:56] 2026-03-03 18:21:13,092 | INFO     | did not find any defunct processes belonging to 2551520
[2026-03-03 19:22:56] 2026-03-03 18:21:13,092 | INFO     | ready for new job
[2026-03-03 19:22:56] 2026-03-03 18:21:13,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 19:22:56] 2026-03-03 18:21:13,093 | INFO     | **************************************
[2026-03-03 19:22:56] 2026-03-03 18:21:13,093 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 19:22:56] 2026-03-03 18:21:13,093 | INFO     | **************************************
[2026-03-03 19:22:56] 2026-03-03 18:21:13,093 | INFO     | 
[2026-03-03 19:22:56] 2026-03-03 18:21:13,102 | INFO     | architecture information:
[2026-03-03 19:22:56] 2026-03-03 18:21:13,102 | INFO     | executing command: cat /etc/os-release
[2026-03-03 19:22:56] 2026-03-03 18:21:13,127 | INFO     | cat /etc/os-release:
[2026-03-03 19:22:56] NAME="CentOS Linux"
[2026-03-03 19:22:56] VERSION="7 (Core)"
[2026-03-03 19:22:56] ID="centos"
[2026-03-03 19:22:56] ID_LIKE="rhel fedora"
[2026-03-03 19:22:56] VERSION_ID="7"
[2026-03-03 19:22:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 19:22:56] ANSI_COLOR="0;31"
[2026-03-03 19:22:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 19:22:56] HOME_URL="https://www.centos.org/"
[2026-03-03 19:22:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 19:22:56] 
[2026-03-03 19:22:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 19:22:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 19:22:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 19:22:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 19:22:56] 
[2026-03-03 19:22:56] 2026-03-03 18:21:13,128 | INFO     | **************************************
[2026-03-03 19:22:56] 2026-03-03 18:21:13,244 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 19:22:56] 2026-03-03 18:21:13,245 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 19:22:56] 2026-03-03 18:21:13,245 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 19:22:56] 2026-03-03 18:21:13,245 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 19:22:56] 2026-03-03 18:21:13,245 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036184269/payload.stdout) since it has not been created yet
[2026-03-03 19:22:56] 2026-03-03 18:21:13,245 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-03 19:22:56] 2026-03-03 18:21:13,260 | INFO     | sufficient remaining disk space (110615330816 B)
[2026-03-03 19:22:56] 2026-03-03 18:21:13,260 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 19:22:56] 2026-03-03 18:21:13,260 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036184269/HITS.48838586._002475.pool.root.1 since it does not exist
[2026-03-03 19:22:56] 2026-03-03 18:21:13,630 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-03 19:22:56] 2026-03-03 18:21:13,647 | INFO     | sufficient remaining disk space (110578630656 B)
[2026-03-03 19:22:56] 2026-03-03 18:21:13,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 19:22:56] 2026-03-03 18:21:13,648 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 19:22:56] 2026-03-03 18:21:13,649 | INFO     | update_server=False
[2026-03-03 19:22:56] 2026-03-03 18:21:13,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 19:22:56] 2026-03-03 18:21:13,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 19:22:56] 2026-03-03 18:21:13,820 | INFO     | number of running child processes to parent process 2551520: 1
[2026-03-03 19:22:56] 2026-03-03 18:21:13,820 | INFO     | maximum number of monitored processes: 6
[2026-03-03 19:22:56] 2026-03-03 18:21:13,820 | INFO     | aborting job monitoring since job object (job id=7036184269) has expired
[2026-03-03 19:22:56] 2026-03-03 18:21:13,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:22:56] 2026-03-03 18:21:13,821 | INFO     | will abort loop
[2026-03-03 19:22:56] 2026-03-03 18:21:13,912 | INFO     | all data control threads have been joined
[2026-03-03 19:22:56] 2026-03-03 18:21:14,653 | INFO     | [job] retrieve thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:14,713 | INFO     | all payload control threads have been joined
[2026-03-03 19:22:56] 2026-03-03 18:21:14,714 | INFO     | [payload] validate_post thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:14,803 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:14,826 | INFO     | [job] job monitor thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:14,917 | INFO     | [data] control thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:15,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:22:56] 2026-03-03 18:21:15,312 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:15,322 | INFO     | all job control threads have been joined
[2026-03-03 19:22:56] 2026-03-03 18:21:15,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 19:22:56] 2026-03-03 18:21:15,655 | INFO     | [data] copytool_out thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:15,678 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:15,718 | INFO     | [payload] control thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:15,794 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:15,815 | INFO     | [payload] failed_post thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:15,999 | INFO     | [job] validate thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:16,016 | INFO     | [data] copytool_in thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:16,114 | INFO     | [job] queue monitor thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:16,328 | INFO     | [job] control thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:19,537 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 19:22:56] 2026-03-03 18:21:44,016 | INFO     | PID=2483770 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 19:22:56] 2026-03-03 18:21:44,016 | INFO     | .. there are 42 such processes running
[2026-03-03 19:22:56] 2026-03-03 18:21:44,016 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 19:22:56] 2026-03-03 18:21:44,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 19:22:56] 2026-03-03 18:21:44,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 19:22:56] 2026-03-03 18:21:48,898 | INFO     | [monitor] cgroup control has ended
[2026-03-03 19:22:56] 2026-03-03 18:21:49,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22661931452224)>', '<ExcThread(monitor, started 22661685311232)>']
[2026-03-03 19:22:56] 2026-03-03 18:21:50,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 19:22:56] 2026-03-03 18:21:50,050 | INFO     | [monitor] control thread has ended
[2026-03-03 19:22:56] 2026-03-03 18:21:54,322 | INFO     | all workflow threads have been joined
[2026-03-03 19:22:56] 2026-03-03 18:21:54,322 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 19:22:56] 2026-03-03 18:21:54,323 | INFO     | traces error code: 0
[2026-03-03 19:22:56] 2026-03-03 18:21:54,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 19:22:56] 2026-03-03 18:21:54,550 [wrapper] ==== pilot stdout END ====
[2026-03-03 19:22:56] 2026-03-03 18:21:54,553 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 19:22:56] 2026-03-03 18:21:54,554 [wrapper] pilotpid: 2483770
[2026-03-03 19:22:56] 2026-03-03 18:21:54,557 [wrapper] Pilot exit status: 0
[2026-03-03 19:22:56] 2026-03-03 18:21:54,564 [wrapper] pandaids: 7036184269
[2026-03-03 19:22:56] 2026-03-03 18:21:54,686 [wrapper] cleanup supervisor_pilot 3114979 2483774
[2026-03-03 19:22:56] 2026-03-03 18:21:54,689 [wrapper] Test setup, not cleaning
[2026-03-03 19:22:56] 2026-03-03 18:21:54,692 [wrapper] apfmon messages muted
[2026-03-03 19:22:56] 2026-03-03 18:21:54,695 [wrapper] ==== wrapper stdout END ====
[2026-03-03 19:22:56] 2026-03-03 18:21:54,697 [wrapper] ==== wrapper stderr END ====
[2026-03-03 19:22:56]  *** Error codes and diagnostics ***
[2026-03-03 19:22:56]     "exeErrorCode": 0,
[2026-03-03 19:22:56]     "exeErrorDiag": "",
[2026-03-03 19:22:56]     "pilotErrorCode": 0,
[2026-03-03 19:22:56]     "pilotErrorDiag": "",
[2026-03-03 19:22:56]  *** Listing of results directory ***
[2026-03-03 19:22:56] total 479948
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc    584627 Mar  3 04:05 pilot3.tar.gz
[2026-03-03 19:22:56] -rwx------. 1 boinc boinc     36322 Mar  3 04:08 runpilot2-wrapper.sh
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc      5111 Mar  3 04:10 queuedata.json
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc       100 Mar  3 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 19:22:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 17:42 run_atlas
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc       105 Mar  3 17:42 job.xml
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc      6704 Mar  3 17:42 init_data.xml
[2026-03-03 19:22:56] -rw-r--r--. 2 boinc boinc 277885270 Mar  3 17:42 EVNT.48220221._000097.pool.root.1
[2026-03-03 19:22:56] -rw-r--r--. 2 boinc boinc     15845 Mar  3 17:42 start_atlas.sh
[2026-03-03 19:22:56] drwxrwx--x. 2 boinc boinc      4096 Mar  3 17:42 shared
[2026-03-03 19:22:56] -rw-r--r--. 2 boinc boinc    597959 Mar  3 17:42 input.tar.gz
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc         0 Mar  3 17:42 boinc_lockfile
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc      2561 Mar  3 17:42 pandaJob.out
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc    998516 Mar  3 17:42 agis_schedconf.cvmfs.json
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc   1516092 Mar  3 17:42 agis_ddmendpoints.agis.ALL.json
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc       445 Mar  3 17:42 workernode_map.json
[2026-03-03 19:22:56] drwx------. 5 boinc boinc      4096 Mar  3 17:42 pilot3
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc 207403701 Mar  3 19:20 HITS.48838586._002475.pool.root.1
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc      1033 Mar  3 19:21 memory_monitor_summary.json
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc       528 Mar  3 19:21 boinc_task_state.xml
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc    273718 Mar  3 19:21 log.48838586._002475.job.log.tgz.1
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc        95 Mar  3 19:21 pilot_heartbeat.json
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc      6351 Mar  3 19:21 heartbeat.json
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc      6264 Mar  3 19:21 pilotlog.txt
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc    848534 Mar  3 19:21 log.48838586._002475.job.log.1
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc       357 Mar  3 19:21 output.list
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc       620 Mar  3 19:21 runtime_log
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc   1136640 Mar  3 19:21 result.tar.gz
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc      9221 Mar  3 19:21 runtime_log.err
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc       662 Mar  3 19:21 Gv3LDmtIVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKVFLDmmw3aTn.diag
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc        26 Mar  3 19:22 wrapper_checkpoint.txt
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc      8192 Mar  3 19:22 boinc_mmap_file
[2026-03-03 19:22:56] -rw-r--r--. 1 boinc boinc     22131 Mar  3 19:22 stderr.txt
[2026-03-03 19:22:56] HITS file was successfully produced:
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc 207403701 Mar  3 19:20 shared/HITS.pool.root.1
[2026-03-03 19:22:56]  *** Contents of shared directory: ***
[2026-03-03 19:22:56] total 475640
[2026-03-03 19:22:56] -rw-r--r--. 2 boinc boinc 277885270 Mar  3 17:42 ATLAS.root_0
[2026-03-03 19:22:56] -rw-r--r--. 2 boinc boinc     15845 Mar  3 17:42 start_atlas.sh
[2026-03-03 19:22:56] -rw-r--r--. 2 boinc boinc    597959 Mar  3 17:42 input.tar.gz
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc 207403701 Mar  3 19:20 HITS.pool.root.1
[2026-03-03 19:22:56] -rw-------. 1 boinc boinc   1136640 Mar  3 19:21 result.tar.gz
19:22:58 (2455078): run_atlas exited; CPU time 22613.542557
19:22:58 (2455078): called boinc_finish(0)

</stderr_txt>
]]>

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