Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:38:56 (25077): wrapper (7.7.26015): starting
22:38:56 (25077): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 22:38:56] Arguments: --nthreads 8
[2026-03-03 22:38:56] Threads: 8
[2026-03-03 22:38:56] Checking for CVMFS
[2026-03-03 22:38:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 22:38:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 22:38:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 22:38:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 22:38:59] 2.11.2.0 3310 9474 82864 156857 2 94 17117435 25165825 1088 130560 152 1955594 99.967 344924 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 22:38:59] CVMFS is ok
[2026-03-03 22:38:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 22:38:59] Checking for apptainer binary...
[2026-03-03 22:38:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 22:38:59] Running /usr/bin/apptainer --version
[2026-03-03 22:39:00] apptainer version 1.3.2-1.el7
[2026-03-03 22:39:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 22:39:26] cg-vwn451.simple-grid.lan
[2026-03-03 22:39:26] apptainer works
[2026-03-03 22:39:27] Set ATHENA_PROC_NUMBER=8
[2026-03-03 22:39:27] Set ATHENA_CORE_NUMBER=8
[2026-03-03 22:39:27] Starting ATLAS job with PandaID=7036183642
[2026-03-03 22:39:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 03:37:17]  *** The last 200 lines of the pilot log: ***
[2026-03-04 03:37:17] 2026-03-04 02:36:38,329 | INFO     | total number of processed events: 400 (read)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,331 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7036183642/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,332 | INFO     | extracted standard info from prmon json
[2026-03-04 03:37:17] 2026-03-04 02:36:38,332 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 03:37:17] 2026-03-04 02:36:38,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 03:37:17] 2026-03-04 02:36:38,332 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 03:37:17] 2026-03-04 02:36:38,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 03:37:17] 2026-03-04 02:36:38,338 | INFO     | fitting pss+swap vs Time
[2026-03-04 03:37:17] 2026-03-04 02:36:38,339 | INFO     | sum of square deviations: 6880054580.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,342 | INFO     | sum of deviations: 127160606344.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,342 | INFO     | mean x: 1772583224.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,342 | INFO     | mean y: 2454476.078291815
[2026-03-04 03:37:17] 2026-03-04 02:36:38,342 | INFO     | intersect: -32759314335.215405
[2026-03-04 03:37:17] 2026-03-04 02:36:38,343 | INFO     | chi2: 6.753309196248499
[2026-03-04 03:37:17] 2026-03-04 02:36:38,343 | INFO     | sum of square deviations: 6519285025.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,346 | INFO     | sum of deviations: 143418842251.50003
[2026-03-04 03:37:17] 2026-03-04 02:36:38,346 | INFO     | mean x: 1772583071.5
[2026-03-04 03:37:17] 2026-03-04 02:36:38,346 | INFO     | mean y: 2461233.8804347827
[2026-03-04 03:37:17] 2026-03-04 02:36:38,346 | INFO     | intersect: -38992890393.52259
[2026-03-04 03:37:17] 2026-03-04 02:36:38,347 | INFO     | chi2: 6.023601302102774
[2026-03-04 03:37:17] 2026-03-04 02:36:38,347 | INFO     | current chi2=6.023601302102774 (change=10.805190062245066 %)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,347 | INFO     | right removable region: 275
[2026-03-04 03:37:17] 2026-03-04 02:36:38,347 | INFO     | sum of square deviations: 6519285025.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,350 | INFO     | sum of deviations: 32019231443.499985
[2026-03-04 03:37:17] 2026-03-04 02:36:38,350 | INFO     | mean x: 1772583376.5
[2026-03-04 03:37:17] 2026-03-04 02:36:38,350 | INFO     | mean y: 2494663.634057971
[2026-03-04 03:37:17] 2026-03-04 02:36:38,351 | INFO     | intersect: -8703484161.8667
[2026-03-04 03:37:17] 2026-03-04 02:36:38,351 | INFO     | chi2: 2.282872639140419
[2026-03-04 03:37:17] 2026-03-04 02:36:38,351 | INFO     | current chi2=2.282872639140419 (change=66.19623694397751 %)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,352 | INFO     | sum of square deviations: 6171352920.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,354 | INFO     | sum of deviations: -17105598406.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,354 | INFO     | mean x: 1772583529.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,355 | INFO     | mean y: 2516086.6051660515
[2026-03-04 03:37:17] 2026-03-04 02:36:38,355 | INFO     | intersect: 4915717840.129944
[2026-03-04 03:37:17] 2026-03-04 02:36:38,355 | INFO     | chi2: 0.8760407466908181
[2026-03-04 03:37:17] 2026-03-04 02:36:38,355 | INFO     | current chi2=0.8760407466908181 (change=61.62550938362125 %)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,356 | INFO     | sum of square deviations: 5836025702.5
[2026-03-04 03:37:17] 2026-03-04 02:36:38,358 | INFO     | sum of deviations: -20058285716.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,358 | INFO     | mean x: 1772583681.5
[2026-03-04 03:37:17] 2026-03-04 02:36:38,358 | INFO     | mean y: 2517404.902255639
[2026-03-04 03:37:17] 2026-03-04 02:36:38,358 | INFO     | intersect: 6094846628.849183
[2026-03-04 03:37:17] 2026-03-04 02:36:38,359 | INFO     | chi2: 0.8548826638848208
[2026-03-04 03:37:17] 2026-03-04 02:36:38,359 | INFO     | current chi2=0.8548826638848208 (change=2.4151939148858603 %)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,359 | INFO     | left removable region: 30
[2026-03-04 03:37:17] 2026-03-04 02:36:38,360 | INFO     | sum of square deviations: 4560048290.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,362 | INFO     | sum of deviations: 9156493083.999998
[2026-03-04 03:37:17] 2026-03-04 02:36:38,362 | INFO     | mean x: 1772583956.0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,362 | INFO     | mean y: 2520152.681632653
[2026-03-04 03:37:17] 2026-03-04 02:36:38,362 | INFO     | intersect: -3556795824.1944275
[2026-03-04 03:37:17] 2026-03-04 02:36:38,363 | INFO     | chi2: 0.0012470010881765348
[2026-03-04 03:37:17] 2026-03-04 02:36:38,363 | INFO     | current memory leak: 2.01 B/s (using 245 data points, chi2=0.00)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,364 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,364 | INFO     | ..............................
[2026-03-04 03:37:17] 2026-03-04 02:36:38,364 | INFO     | . Timing measurements:
[2026-03-04 03:37:17] 2026-03-04 02:36:38,364 | INFO     | . get job = 0 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,364 | INFO     | . initial setup = 123 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,365 | INFO     | . payload setup = 145 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,365 | INFO     | . stage-in = 0 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,365 | INFO     | . payload execution = 17238 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,365 | INFO     | . stage-out = 1 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,365 | INFO     | . log creation = 0 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,365 | INFO     | ..............................
[2026-03-04 03:37:17] 2026-03-04 02:36:38,486 | INFO     | 
[2026-03-04 03:37:17] 2026-03-04 02:36:38,486 | INFO     | job summary report
[2026-03-04 03:37:17] 2026-03-04 02:36:38,486 | INFO     | --------------------------------------------------
[2026-03-04 03:37:17] 2026-03-04 02:36:38,486 | INFO     | PanDA job id: 7036183642
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | task id: 48838536
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | errors: (none)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | pilot state: finished 
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | transexitcode: 0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | exeerrorcode: 0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | exeerrordiag: 
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | exitcode: 0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | exitmsg: OK
[2026-03-04 03:37:17] 2026-03-04 02:36:38,487 | INFO     | cpuconsumptiontime: 63155 s
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | nevents: 400
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | neventsw: 0
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | pid: 1114
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | pgrp: 1114
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | corecount: 8
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | event service: False
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | sizes: {0: 2285994, 1: 2287053, 2: 2287141, 17388: 2319117, 17391: 2328173, 17394: 2328311}
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | --------------------------------------------------
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | 
[2026-03-04 03:37:17] 2026-03-04 02:36:38,488 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-03-04 03:37:17] 2026-03-04 02:36:38,630 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,630 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 03:37:17] 2026-03-04 02:36:38,633 | INFO     | job 7036183642 has completed (purged errors)
[2026-03-04 03:37:17] 2026-03-04 02:36:38,633 | INFO     | overall cleanup function is called
[2026-03-04 03:37:17] 2026-03-04 02:36:39,259 | INFO     | PID=29076 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 03:37:17] 2026-03-04 02:36:39,259 | INFO     | .. there are 2 such processes running
[2026-03-04 03:37:17] 2026-03-04 02:36:39,641 | INFO     | --- collectZombieJob: --- 10, [1114]
[2026-03-04 03:37:17] 2026-03-04 02:36:39,641 | INFO     | zombie collector waiting for pid 1114
[2026-03-04 03:37:17] 2026-03-04 02:36:39,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 03:37:17] 2026-03-04 02:36:39,641 | INFO     | collected zombie processes
[2026-03-04 03:37:17] 2026-03-04 02:36:39,642 | INFO     | will attempt to kill all subprocesses of pid=1114
[2026-03-04 03:37:17] 2026-03-04 02:36:39,704 | INFO     | process IDs to be killed: [1114] (in reverse order)
[2026-03-04 03:37:17] 2026-03-04 02:36:39,762 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 03:37:17] 2026-03-04 02:36:39,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 03:37:17] 2026-03-04 02:36:39,765 | INFO     | did not find any defunct processes belonging to 1114
[2026-03-04 03:37:17] 2026-03-04 02:36:39,766 | INFO     | did not find any defunct processes belonging to 1114
[2026-03-04 03:37:17] 2026-03-04 02:36:39,767 | INFO     | ready for new job
[2026-03-04 03:37:17] 2026-03-04 02:36:39,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 03:37:17] 2026-03-04 02:36:39,769 | INFO     | **************************************
[2026-03-04 03:37:17] 2026-03-04 02:36:39,769 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 03:37:17] 2026-03-04 02:36:39,769 | INFO     | **************************************
[2026-03-04 03:37:17] 2026-03-04 02:36:39,769 | INFO     | 
[2026-03-04 03:37:17] 2026-03-04 02:36:39,770 | INFO     | pilot is running in a VM
[2026-03-04 03:37:17] 2026-03-04 02:36:39,770 | INFO     | architecture information:
[2026-03-04 03:37:17] 2026-03-04 02:36:39,770 | INFO     | executing command: cat /etc/os-release
[2026-03-04 03:37:17] 2026-03-04 02:36:39,788 | INFO     | cat /etc/os-release:
[2026-03-04 03:37:17] NAME="CentOS Linux"
[2026-03-04 03:37:17] VERSION="7 (Core)"
[2026-03-04 03:37:17] ID="centos"
[2026-03-04 03:37:17] ID_LIKE="rhel fedora"
[2026-03-04 03:37:17] VERSION_ID="7"
[2026-03-04 03:37:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 03:37:17] ANSI_COLOR="0;31"
[2026-03-04 03:37:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 03:37:17] HOME_URL="https://www.centos.org/"
[2026-03-04 03:37:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 03:37:17] 
[2026-03-04 03:37:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 03:37:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 03:37:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 03:37:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 03:37:17] 
[2026-03-04 03:37:17] 2026-03-04 02:36:39,788 | INFO     | **************************************
[2026-03-04 03:37:17] 2026-03-04 02:36:40,291 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-03-04 03:37:17] 2026-03-04 02:36:40,312 | INFO     | sufficient remaining disk space (496297312256 B)
[2026-03-04 03:37:17] 2026-03-04 02:36:40,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 03:37:17] 2026-03-04 02:36:40,313 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 03:37:17] 2026-03-04 02:36:40,313 | INFO     | update_server=False
[2026-03-04 03:37:17] 2026-03-04 02:36:40,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 03:37:17] 2026-03-04 02:36:40,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 03:37:17] 2026-03-04 02:36:40,313 | INFO     | aborting loop
[2026-03-04 03:37:17] 2026-03-04 02:36:40,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 03:37:17] 2026-03-04 02:36:40,762 | INFO     | all data control threads have been joined
[2026-03-04 03:37:17] 2026-03-04 02:36:41,028 | INFO     | all payload control threads have been joined
[2026-03-04 03:37:17] 2026-03-04 02:36:41,128 | INFO     | all job control threads have been joined
[2026-03-04 03:37:17] 2026-03-04 02:36:41,319 | INFO     | [job] retrieve thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,320 | INFO     | [job] job monitor thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,325 | INFO     | [job] queue monitor thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,343 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 03:37:17] 2026-03-04 02:36:41,492 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,726 | INFO     | [job] validate thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,767 | INFO     | [data] control thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,920 | INFO     | [payload] failed_post thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:41,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 03:37:17] 2026-03-04 02:36:42,033 | INFO     | [payload] control thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:42,132 | INFO     | [job] control thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:42,197 | INFO     | [payload] validate_post thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:42,376 | INFO     | [data] copytool_in thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:42,544 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:42,559 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:43,376 | INFO     | [data] copytool_out thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:36:45,983 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 03:37:17] 2026-03-04 02:37:11,448 | INFO     | PID=29076 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 03:37:17] 2026-03-04 02:37:11,449 | INFO     | .. there are 2 such processes running
[2026-03-04 03:37:17] 2026-03-04 02:37:11,450 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 03:37:17] 2026-03-04 02:37:11,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 03:37:17] 2026-03-04 02:37:11,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 03:37:17] 2026-03-04 02:37:11,569 | INFO     | [monitor] cgroup control has ended
[2026-03-04 03:37:17] 2026-03-04 02:37:11,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344646088512)>', '<ExcThread(monitor, started 140344196839168)>']
[2026-03-04 03:37:17] 2026-03-04 02:37:12,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 03:37:17] 2026-03-04 02:37:12,456 | INFO     | [monitor] control thread has ended
[2026-03-04 03:37:17] 2026-03-04 02:37:16,978 | INFO     | all workflow threads have been joined
[2026-03-04 03:37:17] 2026-03-04 02:37:16,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 03:37:17] 2026-03-04 02:37:16,979 | INFO     | traces error code: 0
[2026-03-04 03:37:17] 2026-03-04 02:37:16,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 03:37:17] 2026-03-04 02:37:17,129 [wrapper] ==== pilot stdout END ====
[2026-03-04 03:37:17] 2026-03-04 02:37:17,134 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 03:37:17] 2026-03-04 02:37:17,138 [wrapper] pilotpid: 29076
[2026-03-04 03:37:17] 2026-03-04 02:37:17,144 [wrapper] Pilot exit status: 0
[2026-03-04 03:37:17] 2026-03-04 02:37:17,163 [wrapper] pandaids: 7036183642
[2026-03-04 03:37:17] 2026-03-04 02:37:17,225 [wrapper] cleanup supervisor_pilot  8466 29077
[2026-03-04 03:37:17] 2026-03-04 02:37:17,230 [wrapper] Test setup, not cleaning
[2026-03-04 03:37:17] 2026-03-04 02:37:17,243 [wrapper] apfmon messages muted
[2026-03-04 03:37:17] 2026-03-04 02:37:17,247 [wrapper] ==== wrapper stdout END ====
[2026-03-04 03:37:17] 2026-03-04 02:37:17,251 [wrapper] ==== wrapper stderr END ====
[2026-03-04 03:37:17]  *** Error codes and diagnostics ***
[2026-03-04 03:37:17]     "exeErrorCode": 0,
[2026-03-04 03:37:17]     "exeErrorDiag": "",
[2026-03-04 03:37:17]     "pilotErrorCode": 0,
[2026-03-04 03:37:17]     "pilotErrorDiag": "",
[2026-03-04 03:37:17]  *** Listing of results directory ***
[2026-03-04 03:37:17] total 465648
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc    584627 Mar  3 04:05 pilot3.tar.gz
[2026-03-04 03:37:17] -rwx------. 1 boinc boinc     36322 Mar  3 04:08 runpilot2-wrapper.sh
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc      5111 Mar  3 04:10 queuedata.json
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc       100 Mar  3 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 03:37:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 22:38 run_atlas
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc       105 Mar  3 22:38 job.xml
[2026-03-04 03:37:17] -rw-r--r--. 2 boinc boinc 267801693 Mar  3 22:38 EVNT.48343704._000100.pool.root.1
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc      6392 Mar  3 22:38 init_data.xml
[2026-03-04 03:37:17] -rw-r--r--. 2 boinc boinc     15845 Mar  3 22:38 start_atlas.sh
[2026-03-04 03:37:17] drwxrwx--x. 2 boinc boinc        68 Mar  3 22:38 shared
[2026-03-04 03:37:17] -rw-r--r--. 2 boinc boinc    597970 Mar  3 22:38 input.tar.gz
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc         0 Mar  3 22:38 boinc_lockfile
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc      2574 Mar  3 22:39 pandaJob.out
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc       415 Mar  3 22:46 workernode_map.json
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc    998484 Mar  3 22:46 agis_schedconf.cvmfs.json
[2026-03-04 03:37:17] drwx------. 5 boinc boinc      4096 Mar  3 22:46 pilot3
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc 199223243 Mar  4 03:35 HITS.48838536._002593.pool.root.1
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc       530 Mar  4 03:35 boinc_task_state.xml
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc      1011 Mar  4 03:36 memory_monitor_summary.json
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc   1516092 Mar  4 03:36 agis_ddmendpoints.agis.ALL.json
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc    495174 Mar  4 03:36 log.48838536._002593.job.log.tgz.1
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc      6308 Mar  4 03:36 heartbeat.json
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc      8192 Mar  4 03:36 boinc_mmap_file
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc        28 Mar  4 03:36 wrapper_checkpoint.txt
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc        95 Mar  4 03:37 pilot_heartbeat.json
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc      4881 Mar  4 03:37 pilotlog.txt
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc   2443654 Mar  4 03:37 log.48838536._002593.job.log.1
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc       357 Mar  4 03:37 output.list
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc       620 Mar  4 03:37 runtime_log
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc   2959360 Mar  4 03:37 result.tar.gz
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc      8832 Mar  4 03:37 runtime_log.err
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc       655 Mar  4 03:37 DbyKDmrIVH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCSDLDmNmwJEn.diag
[2026-03-04 03:37:17] -rw-r--r--. 1 boinc boinc     20769 Mar  4 03:37 stderr.txt
[2026-03-04 03:37:17] HITS file was successfully produced:
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc 199223243 Mar  4 03:35 shared/HITS.pool.root.1
[2026-03-04 03:37:17]  *** Contents of shared directory: ***
[2026-03-04 03:37:17] total 459576
[2026-03-04 03:37:17] -rw-r--r--. 2 boinc boinc 267801693 Mar  3 22:38 ATLAS.root_0
[2026-03-04 03:37:17] -rw-r--r--. 2 boinc boinc     15845 Mar  3 22:38 start_atlas.sh
[2026-03-04 03:37:17] -rw-r--r--. 2 boinc boinc    597970 Mar  3 22:38 input.tar.gz
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc 199223243 Mar  4 03:35 HITS.pool.root.1
[2026-03-04 03:37:17] -rw-------. 1 boinc boinc   2959360 Mar  4 03:37 result.tar.gz
03:37:19 (25077): run_atlas exited; CPU time 63353.234591
03:37:19 (25077): called boinc_finish(0)

</stderr_txt>
]]>

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