Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:53:50 (1998796): wrapper (7.7.26015): starting
00:53:50 (1998796): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 00:53:50] Arguments: --nthreads 4
[2026-03-04 00:53:50] Threads: 4
[2026-03-04 00:53:50] Checking for CVMFS
[2026-03-04 00:53:50] No cvmfs_config command found, will try listing directly
[2026-03-04 00:53:50] CVMFS is ok
[2026-03-04 00:53:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 00:53:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 00:53:50] Further information can be found at the LHC@home message board.
[2026-03-04 00:53:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 00:53:50] Checking for apptainer binary...
[2026-03-04 00:53:50] which: no apptainer in ((null))
[2026-03-04 00:53:50] apptainer is not installed, using version from CVMFS
[2026-03-04 00:53:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 00:53:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-04 00:53:50] apptainer works
[2026-03-04 00:53:50] Set ATHENA_PROC_NUMBER=4
[2026-03-04 00:53:50] Set ATHENA_CORE_NUMBER=4
[2026-03-04 00:53:50] Starting ATLAS job with PandaID=7036220064
[2026-03-04 00:53:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 04:58:33]  *** The last 200 lines of the pilot log: ***
[2026-03-04 04:58:33] 2026-03-04 03:57:45,881 | INFO     | extracted standard info from prmon json
[2026-03-04 04:58:33] 2026-03-04 03:57:45,882 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:58:33] 2026-03-04 03:57:45,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:58:33] 2026-03-04 03:57:45,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:58:33] 2026-03-04 03:57:45,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:58:33] 2026-03-04 03:57:45,887 | INFO     | fitting pss+swap vs Time
[2026-03-04 04:58:33] 2026-03-04 03:57:45,887 | INFO     | sum of square deviations: 4286517580.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,889 | INFO     | sum of deviations: 17925966727.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,889 | INFO     | mean x: 1772589354.5
[2026-03-04 04:58:33] 2026-03-04 03:57:45,889 | INFO     | mean y: 2318358.6166666667
[2026-03-04 04:58:33] 2026-03-04 03:57:45,889 | INFO     | intersect: -7410547026.016005
[2026-03-04 04:58:33] 2026-03-04 03:57:45,890 | INFO     | chi2: 2.1698978551709476
[2026-03-04 04:58:33] 2026-03-04 03:57:45,890 | INFO     | sum of square deviations: 4024149870.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,892 | INFO     | sum of deviations: 32442688533.000004
[2026-03-04 04:58:33] 2026-03-04 03:57:45,892 | INFO     | mean x: 1772589202.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,892 | INFO     | mean y: 2326646.974468085
[2026-03-04 04:58:33] 2026-03-04 03:57:45,892 | INFO     | intersect: -14288284099.4501
[2026-03-04 04:58:33] 2026-03-04 03:57:45,892 | INFO     | chi2: 1.3626114370940767
[2026-03-04 04:58:33] 2026-03-04 03:57:45,893 | INFO     | current chi2=1.3626114370940767 (change=37.20389031921835 %)
[2026-03-04 04:58:33] 2026-03-04 03:57:45,893 | INFO     | sum of square deviations: 3772712597.5
[2026-03-04 04:58:33] 2026-03-04 03:57:45,894 | INFO     | sum of deviations: 31609466841.000004
[2026-03-04 04:58:33] 2026-03-04 03:57:45,895 | INFO     | mean x: 1772589049.5
[2026-03-04 04:58:33] 2026-03-04 03:57:45,895 | INFO     | mean y: 2326141.6608695653
[2026-03-04 04:58:33] 2026-03-04 03:57:45,895 | INFO     | intersect: -14849214582.649488
[2026-03-04 04:58:33] 2026-03-04 03:57:45,895 | INFO     | chi2: 1.3631587331355983
[2026-03-04 04:58:33] 2026-03-04 03:57:45,895 | INFO     | current chi2=1.3631587331355983 (change=-0.04016523174711972 %)
[2026-03-04 04:58:33] 2026-03-04 03:57:45,895 | INFO     | right removable region: 229
[2026-03-04 04:58:33] 2026-03-04 03:57:45,896 | INFO     | sum of square deviations: 4024149870.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,897 | INFO     | sum of deviations: -14464178358.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,897 | INFO     | mean x: 1772589507.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,898 | INFO     | mean y: 2336999.540425532
[2026-03-04 04:58:33] 2026-03-04 03:57:45,898 | INFO     | intersect: 6373633201.977162
[2026-03-04 04:58:33] 2026-03-04 03:57:45,898 | INFO     | chi2: 0.8332944386661434
[2026-03-04 04:58:33] 2026-03-04 03:57:45,898 | INFO     | current chi2=0.8332944386661434 (change=61.59752696743897 %)
[2026-03-04 04:58:33] 2026-03-04 03:57:45,899 | INFO     | sum of square deviations: 3772712597.5
[2026-03-04 04:58:33] 2026-03-04 03:57:45,900 | INFO     | sum of deviations: -14747150892.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,900 | INFO     | mean x: 1772589659.5
[2026-03-04 04:58:33] 2026-03-04 03:57:45,900 | INFO     | mean y: 2337159.3217391307
[2026-03-04 04:58:33] 2026-03-04 03:57:45,900 | INFO     | intersect: 6931210351.403104
[2026-03-04 04:58:33] 2026-03-04 03:57:45,901 | INFO     | chi2: 0.8305892885801179
[2026-03-04 04:58:33] 2026-03-04 03:57:45,901 | INFO     | current chi2=0.8305892885801179 (change=0.3246331621216139 %)
[2026-03-04 04:58:33] 2026-03-04 03:57:45,901 | INFO     | left removable region: 20
[2026-03-04 04:58:33] 2026-03-04 03:57:45,901 | INFO     | sum of square deviations: 2830787960.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,903 | INFO     | sum of deviations: 2797350078.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,903 | INFO     | mean x: 1772589629.0
[2026-03-04 04:58:33] 2026-03-04 03:57:45,903 | INFO     | mean y: 2343902.76076555
[2026-03-04 04:58:33] 2026-03-04 03:57:45,903 | INFO     | intersect: -1749307512.6794574
[2026-03-04 04:58:33] 2026-03-04 03:57:45,903 | INFO     | chi2: 0.0011809350497574294
[2026-03-04 04:58:33] 2026-03-04 03:57:45,904 | INFO     | current memory leak: 0.99 B/s (using 209 data points, chi2=0.00)
[2026-03-04 04:58:33] 2026-03-04 03:57:45,904 | INFO     | could have reported an average CPU frequency of 2581 MHz (12 samples)
[2026-03-04 04:58:33] 2026-03-04 03:57:45,904 | INFO     | ..............................
[2026-03-04 04:58:33] 2026-03-04 03:57:45,904 | INFO     | . Timing measurements:
[2026-03-04 04:58:33] 2026-03-04 03:57:45,904 | INFO     | . get job = 0 s
[2026-03-04 04:58:33] 2026-03-04 03:57:45,905 | INFO     | . initial setup = 5 s
[2026-03-04 04:58:33] 2026-03-04 03:57:45,905 | INFO     | . payload setup = 5 s
[2026-03-04 04:58:33] 2026-03-04 03:57:45,905 | INFO     | . stage-in = 0 s
[2026-03-04 04:58:33] 2026-03-04 03:57:45,905 | INFO     | . payload execution = 14597 s
[2026-03-04 04:58:33] 2026-03-04 03:57:45,905 | INFO     | . stage-out = 1 s
[2026-03-04 04:58:33] 2026-03-04 03:57:45,905 | INFO     | . log creation = 0 s
[2026-03-04 04:58:33] 2026-03-04 03:57:45,905 | INFO     | ..............................
[2026-03-04 04:58:33] 2026-03-04 03:57:46,000 | INFO     | 
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | job summary report
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | --------------------------------------------------
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | PanDA job id: 7036220064
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | task id: 48851750
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | errors: (none)
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | pilot state: finished 
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | transexitcode: 0
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | exeerrorcode: 0
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | exeerrordiag: 
[2026-03-04 04:58:33] 2026-03-04 03:57:46,001 | INFO     | exitcode: 0
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | exitmsg: OK
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | cpuconsumptiontime: 56063 s
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | nevents: 400
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | neventsw: 0
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | pid: 2007440
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | pgrp: 2007440
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | corecount: 4
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | event service: False
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | sizes: {0: 2286899, 1: 2287161, 11: 2287189, 14607: 2318114, 14609: 2327134, 14611: 2327512}
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | --------------------------------------------------
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | 
[2026-03-04 04:58:33] 2026-03-04 03:57:46,002 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-04 04:58:33] 2026-03-04 03:57:46,024 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,024 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,024 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,024 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | job 7036220064 has completed (purged errors)
[2026-03-04 04:58:33] 2026-03-04 03:57:46,026 | INFO     | overall cleanup function is called
[2026-03-04 04:58:33] 2026-03-04 03:57:46,330 | WARNING  | process 2007440 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 04:58:33] 2026-03-04 03:57:46,559 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:58:33] 2026-03-04 03:57:46,868 | INFO     | number of running child processes to parent process 2007440: 1
[2026-03-04 04:58:33] 2026-03-04 03:57:46,868 | INFO     | maximum number of monitored processes: 6
[2026-03-04 04:58:33] 2026-03-04 03:57:46,868 | INFO     | aborting job monitoring since job object (job id=7036220064) has expired
[2026-03-04 04:58:33] 2026-03-04 03:57:47,035 | INFO     | --- collectZombieJob: --- 10, [2007440]
[2026-03-04 04:58:33] 2026-03-04 03:57:47,035 | INFO     | zombie collector waiting for pid 2007440
[2026-03-04 04:58:33] 2026-03-04 03:57:47,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 04:58:33] 2026-03-04 03:57:47,035 | INFO     | collected zombie processes
[2026-03-04 04:58:33] 2026-03-04 03:57:47,036 | INFO     | will attempt to kill all subprocesses of pid=2007440
[2026-03-04 04:58:33] 2026-03-04 03:57:47,338 | INFO     | process IDs to be killed: [2007440] (in reverse order)
[2026-03-04 04:58:33] 2026-03-04 03:57:47,446 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 04:58:33] 2026-03-04 03:57:47,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 04:58:33] 2026-03-04 03:57:47,456 | INFO     | did not find any defunct processes belonging to 2007440
[2026-03-04 04:58:33] 2026-03-04 03:57:47,465 | INFO     | did not find any defunct processes belonging to 2007440
[2026-03-04 04:58:33] 2026-03-04 03:57:47,465 | INFO     | ready for new job
[2026-03-04 04:58:33] 2026-03-04 03:57:47,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 04:58:33] 2026-03-04 03:57:47,468 | INFO     | **************************************
[2026-03-04 04:58:33] 2026-03-04 03:57:47,468 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 04:58:33] 2026-03-04 03:57:47,468 | INFO     | **************************************
[2026-03-04 04:58:33] 2026-03-04 03:57:47,468 | INFO     | 
[2026-03-04 04:58:33] 2026-03-04 03:57:47,472 | INFO     | architecture information:
[2026-03-04 04:58:33] 2026-03-04 03:57:47,472 | INFO     | executing command: cat /etc/os-release
[2026-03-04 04:58:33] 2026-03-04 03:57:47,487 | INFO     | cat /etc/os-release:
[2026-03-04 04:58:33] NAME="CentOS Linux"
[2026-03-04 04:58:33] VERSION="7 (Core)"
[2026-03-04 04:58:33] ID="centos"
[2026-03-04 04:58:33] ID_LIKE="rhel fedora"
[2026-03-04 04:58:33] VERSION_ID="7"
[2026-03-04 04:58:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 04:58:33] ANSI_COLOR="0;31"
[2026-03-04 04:58:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 04:58:33] HOME_URL="https://www.centos.org/"
[2026-03-04 04:58:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 04:58:33] 
[2026-03-04 04:58:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 04:58:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 04:58:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 04:58:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 04:58:33] 
[2026-03-04 04:58:33] 2026-03-04 03:57:47,487 | INFO     | **************************************
[2026-03-04 04:58:33] 2026-03-04 03:57:47,990 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-04 04:58:33] 2026-03-04 03:57:48,006 | INFO     | sufficient remaining disk space (670000218112 B)
[2026-03-04 04:58:33] 2026-03-04 03:57:48,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 04:58:33] 2026-03-04 03:57:48,007 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 04:58:33] 2026-03-04 03:57:48,007 | INFO     | update_server=False
[2026-03-04 04:58:33] 2026-03-04 03:57:48,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 04:58:33] 2026-03-04 03:57:48,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:58:33] 2026-03-04 03:57:48,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 04:58:33] 2026-03-04 03:57:48,008 | INFO     | aborting loop
[2026-03-04 04:58:33] 2026-03-04 03:57:48,251 | INFO     | all payload control threads have been joined
[2026-03-04 04:58:33] 2026-03-04 03:57:48,803 | INFO     | all data control threads have been joined
[2026-03-04 04:58:33] 2026-03-04 03:57:49,012 | INFO     | [job] retrieve thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,013 | INFO     | [job] job monitor thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,157 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,257 | INFO     | [payload] control thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,358 | INFO     | [payload] failed_post thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,365 | INFO     | [data] copytool_in thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 04:58:33] 2026-03-04 03:57:49,603 | INFO     | all job control threads have been joined
[2026-03-04 04:58:33] 2026-03-04 03:57:49,809 | INFO     | [data] control thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,852 | INFO     | [job] validate thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:49,957 | INFO     | [payload] validate_post thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:50,159 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:50,231 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:50,290 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:50,608 | INFO     | [job] control thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:51,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:58:33] 2026-03-04 03:57:51,472 | INFO     | [data] copytool_out thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:52,013 | INFO     | [job] queue monitor thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:57:52,013 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 04:58:33] 2026-03-04 03:58:18,665 | INFO     | PID=2002583 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 04:58:33] 2026-03-04 03:58:18,665 | INFO     | .. there are 12 such processes running
[2026-03-04 04:58:33] 2026-03-04 03:58:18,665 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 04:58:33] 2026-03-04 03:58:18,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 04:58:33] 2026-03-04 03:58:18,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 04:58:33] 2026-03-04 03:58:27,039 | INFO     | [monitor] cgroup control has ended
[2026-03-04 04:58:33] 2026-03-04 03:58:28,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22578704553792)>', '<ExcThread(monitor, started 22578466141952)>']
[2026-03-04 04:58:33] 2026-03-04 03:58:28,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 04:58:33] 2026-03-04 03:58:28,706 | INFO     | [monitor] control thread has ended
[2026-03-04 04:58:33] 2026-03-04 03:58:33,114 | INFO     | all workflow threads have been joined
[2026-03-04 04:58:33] 2026-03-04 03:58:33,115 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 04:58:33] 2026-03-04 03:58:33,115 | INFO     | traces error code: 0
[2026-03-04 04:58:33] 2026-03-04 03:58:33,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 04:58:33] 2026-03-04 03:58:33,244 [wrapper] ==== pilot stdout END ====
[2026-03-04 04:58:33] 2026-03-04 03:58:33,247 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 04:58:33] 2026-03-04 03:58:33,250 [wrapper] pilotpid: 2002583
[2026-03-04 04:58:33] 2026-03-04 03:58:33,253 [wrapper] Pilot exit status: 0
[2026-03-04 04:58:33] 2026-03-04 03:58:33,263 [wrapper] pandaids: 7036220064
[2026-03-04 04:58:33] 2026-03-04 03:58:33,328 [wrapper] cleanup supervisor_pilot 2194213 2002584
[2026-03-04 04:58:33] 2026-03-04 03:58:33,330 [wrapper] Test setup, not cleaning
[2026-03-04 04:58:33] 2026-03-04 03:58:33,333 [wrapper] apfmon messages muted
[2026-03-04 04:58:33] 2026-03-04 03:58:33,335 [wrapper] ==== wrapper stdout END ====
[2026-03-04 04:58:33] 2026-03-04 03:58:33,337 [wrapper] ==== wrapper stderr END ====
[2026-03-04 04:58:33]  *** Error codes and diagnostics ***
[2026-03-04 04:58:33]     "exeErrorCode": 0,
[2026-03-04 04:58:33]     "exeErrorDiag": "",
[2026-03-04 04:58:33]     "pilotErrorCode": 0,
[2026-03-04 04:58:33]     "pilotErrorDiag": "",
[2026-03-04 04:58:33]  *** Listing of results directory ***
[2026-03-04 04:58:33] total 448308
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc    584627 Mar  3 08:05 pilot3.tar.gz
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc      5111 Mar  3 08:05 queuedata.json
[2026-03-04 04:58:33] -rwx------ 1 boinc boinc     36322 Mar  3 08:05 runpilot2-wrapper.sh
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc       100 Mar  4 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 04:58:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 00:53 run_atlas
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc       105 Mar  4 00:53 job.xml
[2026-03-04 04:58:33] -rw-r--r-- 2 boinc boinc 252077475 Mar  4 00:53 EVNT.48460885._000002.pool.root.1
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc      6638 Mar  4 00:53 init_data.xml
[2026-03-04 04:58:33] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:53 start_atlas.sh
[2026-03-04 04:58:33] drwxrwx--x 2 boinc boinc      4096 Mar  4 00:53 shared
[2026-03-04 04:58:33] -rw-r--r-- 2 boinc boinc    597969 Mar  4 00:53 input.tar.gz
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc         0 Mar  4 00:53 boinc_lockfile
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc      2621 Mar  4 00:53 pandaJob.out
[2026-03-04 04:58:33] -rw------- 1 boinc boinc    998484 Mar  4 00:53 agis_schedconf.cvmfs.json
[2026-03-04 04:58:33] -rw------- 1 boinc boinc       452 Mar  4 00:54 workernode_map.json
[2026-03-04 04:58:33] drwx------ 5 boinc boinc      4096 Mar  4 00:54 pilot3
[2026-03-04 04:58:33] -rw------- 1 boinc boinc 198093753 Mar  4 04:57 HITS.48851750._000035.pool.root.1
[2026-03-04 04:58:33] -rw------- 1 boinc boinc        95 Mar  4 04:57 pilot_heartbeat.json
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc       530 Mar  4 04:57 boinc_task_state.xml
[2026-03-04 04:58:33] -rw------- 1 boinc boinc      1033 Mar  4 04:57 memory_monitor_summary.json
[2026-03-04 04:58:33] -rw------- 1 boinc boinc   1516092 Mar  4 04:57 agis_ddmendpoints.agis.ALL.json
[2026-03-04 04:58:33] -rw------- 1 boinc boinc    406863 Mar  4 04:57 log.48851750._000035.job.log.tgz.1
[2026-03-04 04:58:33] -rw------- 1 boinc boinc      6395 Mar  4 04:57 heartbeat.json
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc        28 Mar  4 04:58 wrapper_checkpoint.txt
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc      8192 Mar  4 04:58 boinc_mmap_file
[2026-03-04 04:58:33] -rw------- 1 boinc boinc      4830 Mar  4 04:58 pilotlog.txt
[2026-03-04 04:58:33] -rw------- 1 boinc boinc   2076572 Mar  4 04:58 log.48851750._000035.job.log.1
[2026-03-04 04:58:33] -rw------- 1 boinc boinc       357 Mar  4 04:58 output.list
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc       620 Mar  4 04:58 runtime_log
[2026-03-04 04:58:33] -rw------- 1 boinc boinc   2498560 Mar  4 04:58 result.tar.gz
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc      9205 Mar  4 04:58 runtime_log.err
[2026-03-04 04:58:33] -rw------- 1 boinc boinc       664 Mar  4 04:58 JMuNDmrzYH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYnDLDmF1Z8Im.diag
[2026-03-04 04:58:33] -rw-r--r-- 1 boinc boinc     20846 Mar  4 04:58 stderr.txt
[2026-03-04 04:58:33] HITS file was successfully produced:
[2026-03-04 04:58:33] -rw------- 1 boinc boinc 198093753 Mar  4 04:57 shared/HITS.pool.root.1
[2026-03-04 04:58:33]  *** Contents of shared directory: ***
[2026-03-04 04:58:33] total 442672
[2026-03-04 04:58:33] -rw-r--r-- 2 boinc boinc 252077475 Mar  4 00:53 ATLAS.root_0
[2026-03-04 04:58:33] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:53 start_atlas.sh
[2026-03-04 04:58:33] -rw-r--r-- 2 boinc boinc    597969 Mar  4 00:53 input.tar.gz
[2026-03-04 04:58:33] -rw------- 1 boinc boinc 198093753 Mar  4 04:57 HITS.pool.root.1
[2026-03-04 04:58:33] -rw------- 1 boinc boinc   2498560 Mar  4 04:58 result.tar.gz
04:58:35 (1998796): run_atlas exited; CPU time 56638.838613
04:58:35 (1998796): called boinc_finish(0)

</stderr_txt>
]]>

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