Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:48:24 (28448): wrapper (7.7.26015): starting
01:48:24 (28448): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 01:48:24] Arguments: --nthreads 8
[2026-03-03 01:48:24] Threads: 8
[2026-03-03 01:48:24] Checking for CVMFS
[2026-03-03 01:48:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 01:48:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 01:48:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 01:48:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 01:48:25] 2.11.2.0 2876 205058 80904 156835 1 50 11121586 20275201 1 130560 0 53315745 99.844 13871957 31846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 01:48:25] CVMFS is ok
[2026-03-03 01:48:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 01:48:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 01:48:25] Further information can be found at the LHC@home message board.
[2026-03-03 01:48:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 01:48:25] Checking for apptainer binary...
[2026-03-03 01:48:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 01:48:25] Running /usr/bin/apptainer --version
[2026-03-03 01:48:25] apptainer version 1.3.2-1.el7
[2026-03-03 01:48:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 01:48:27] c-204-40.aglt2.org
[2026-03-03 01:48:27] apptainer works
[2026-03-03 01:48:27] Set ATHENA_PROC_NUMBER=8
[2026-03-03 01:48:27] Set ATHENA_CORE_NUMBER=8
[2026-03-03 01:48:27] Starting ATLAS job with PandaID=7036089048
[2026-03-03 01:48:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 03:47:09]  *** The last 200 lines of the pilot log: ***
[2026-03-03 03:47:09] 2026-03-03 08:46:20,955 | INFO     | time since job start (7049s) is within the limit (349056.0s)
[2026-03-03 03:47:09] 2026-03-03 08:46:21,314 | INFO     | monitor loop #533: job 0:7036089048 is in state 'finished'
[2026-03-03 03:47:09] 2026-03-03 08:46:21,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 03:47:09] 2026-03-03 08:46:21,985 | INFO     | job 7036089048 has state=finished
[2026-03-03 03:47:09] 2026-03-03 08:46:21,985 | INFO     | preparing for final server update for job 7036089048 in state='finished'
[2026-03-03 03:47:09] 2026-03-03 08:46:21,986 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036089048/jobReport.json
[2026-03-03 03:47:09] 2026-03-03 08:46:21,989 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 03:47:09] 2026-03-03 08:46:21,989 | INFO     | this job has now completed (state=finished)
[2026-03-03 03:47:09] 2026-03-03 08:46:21,990 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 03:47:09] 2026-03-03 08:46:21,990 | INFO     | log transfer has been attempted: DONE
[2026-03-03 03:47:09] 2026-03-03 08:46:21,990 | INFO     | job 7036089048 has finished - writing final server update
[2026-03-03 03:47:09] 2026-03-03 08:46:21,990 | INFO     | total number of processed events: 400 (read)
[2026-03-03 03:47:09] 2026-03-03 08:46:21,993 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036089048/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 03:47:09] 2026-03-03 08:46:21,993 | INFO     | extracted standard info from prmon json
[2026-03-03 03:47:09] 2026-03-03 08:46:21,994 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 03:47:09] 2026-03-03 08:46:21,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 03:47:09] 2026-03-03 08:46:21,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 03:47:09] 2026-03-03 08:46:21,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 03:47:09] 2026-03-03 08:46:21,996 | INFO     | fitting pss+swap vs Time
[2026-03-03 03:47:09] 2026-03-03 08:46:21,996 | INFO     | sum of square deviations: 471562330.0
[2026-03-03 03:47:09] 2026-03-03 08:46:21,997 | INFO     | sum of deviations: 13181584367.000002
[2026-03-03 03:47:09] 2026-03-03 08:46:21,997 | INFO     | mean x: 1772524035.0
[2026-03-03 03:47:09] 2026-03-03 08:46:21,997 | INFO     | mean y: 2493503.2782608694
[2026-03-03 03:47:09] 2026-03-03 08:46:21,997 | INFO     | intersect: -49544880456.57083
[2026-03-03 03:47:09] 2026-03-03 08:46:21,998 | INFO     | chi2: 1.4542204609347897
[2026-03-03 03:47:09] 2026-03-03 08:46:21,998 | INFO     | sum of square deviations: 412686807.5
[2026-03-03 03:47:09] 2026-03-03 08:46:21,998 | INFO     | sum of deviations: 12477761090.5
[2026-03-03 03:47:09] 2026-03-03 08:46:21,999 | INFO     | mean x: 1772523882.5
[2026-03-03 03:47:09] 2026-03-03 08:46:21,999 | INFO     | mean y: 2491679.081818182
[2026-03-03 03:47:09] 2026-03-03 08:46:21,999 | INFO     | intersect: -53590521548.12316
[2026-03-03 03:47:09] 2026-03-03 08:46:21,999 | INFO     | chi2: 1.4570010719433202
[2026-03-03 03:47:09] 2026-03-03 08:46:21,999 | INFO     | current chi2=1.4570010719433202 (change=-0.19120972942046446 %)
[2026-03-03 03:47:09] 2026-03-03 08:46:21,999 | INFO     | right removable region: 109
[2026-03-03 03:47:09] 2026-03-03 08:46:22,000 | INFO     | sum of square deviations: 412686807.5
[2026-03-03 03:47:09] 2026-03-03 08:46:22,000 | INFO     | sum of deviations: -3194149954.000001
[2026-03-03 03:47:09] 2026-03-03 08:46:22,000 | INFO     | mean x: 1772524187.5
[2026-03-03 03:47:09] 2026-03-03 08:46:22,000 | INFO     | mean y: 2535033.5636363635
[2026-03-03 03:47:09] 2026-03-03 08:46:22,000 | INFO     | intersect: 13721674945.655481
[2026-03-03 03:47:09] 2026-03-03 08:46:22,001 | INFO     | chi2: 0.07739701610416524
[2026-03-03 03:47:09] 2026-03-03 08:46:22,001 | INFO     | current chi2=0.07739701610416524 (change=94.6777659795535 %)
[2026-03-03 03:47:09] 2026-03-03 08:46:22,001 | INFO     | sum of square deviations: 358927660.0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,002 | INFO     | sum of deviations: -3091101189.9999995
[2026-03-03 03:47:09] 2026-03-03 08:46:22,002 | INFO     | mean x: 1772524340.0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,002 | INFO     | mean y: 2534584.819047619
[2026-03-03 03:47:09] 2026-03-03 08:46:22,002 | INFO     | intersect: 15267594114.301851
[2026-03-03 03:47:09] 2026-03-03 08:46:22,002 | INFO     | chi2: 0.06080036097216092
[2026-03-03 03:47:09] 2026-03-03 08:46:22,002 | INFO     | current chi2=0.06080036097216092 (change=21.443533571975976 %)
[2026-03-03 03:47:09] 2026-03-03 08:46:22,002 | INFO     | left removable region: 20
[2026-03-03 03:47:09] 2026-03-03 08:46:22,003 | INFO     | sum of square deviations: 218571540.0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,003 | INFO     | sum of deviations: 1542830422.0000002
[2026-03-03 03:47:09] 2026-03-03 08:46:22,003 | INFO     | mean x: 1772524462.0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,003 | INFO     | mean y: 2518106.9438202246
[2026-03-03 03:47:09] 2026-03-03 08:46:22,003 | INFO     | intersect: -12509196198.188417
[2026-03-03 03:47:09] 2026-03-03 08:46:22,004 | INFO     | chi2: 0.00031951963959605514
[2026-03-03 03:47:09] 2026-03-03 08:46:22,004 | INFO     | current memory leak: 7.06 B/s (using 89 data points, chi2=0.00)
[2026-03-03 03:47:09] 2026-03-03 08:46:22,004 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-03-03 03:47:09] 2026-03-03 08:46:22,004 | INFO     | ..............................
[2026-03-03 03:47:09] 2026-03-03 08:46:22,004 | INFO     | . Timing measurements:
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | . get job = 0 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | . initial setup = 8 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | . payload setup = 8 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | . stage-in = 0 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | . payload execution = 7020 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | . stage-out = 0 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | . log creation = 0 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,005 | INFO     | ..............................
[2026-03-03 03:47:09] 2026-03-03 08:46:22,087 | INFO     | 
[2026-03-03 03:47:09] 2026-03-03 08:46:22,087 | INFO     | job summary report
[2026-03-03 03:47:09] 2026-03-03 08:46:22,087 | INFO     | --------------------------------------------------
[2026-03-03 03:47:09] 2026-03-03 08:46:22,087 | INFO     | PanDA job id: 7036089048
[2026-03-03 03:47:09] 2026-03-03 08:46:22,088 | INFO     | task id: 48849721
[2026-03-03 03:47:09] 2026-03-03 08:46:22,088 | INFO     | errors: (none)
[2026-03-03 03:47:09] 2026-03-03 08:46:22,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 03:47:09] 2026-03-03 08:46:22,088 | INFO     | pilot state: finished 
[2026-03-03 03:47:09] 2026-03-03 08:46:22,088 | INFO     | transexitcode: 0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,088 | INFO     | exeerrorcode: 0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,089 | INFO     | exeerrordiag: 
[2026-03-03 03:47:09] 2026-03-03 08:46:22,089 | INFO     | exitcode: 0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,089 | INFO     | exitmsg: OK
[2026-03-03 03:47:09] 2026-03-03 08:46:22,089 | INFO     | cpuconsumptiontime: 51545 s
[2026-03-03 03:47:09] 2026-03-03 08:46:22,089 | INFO     | nevents: 400
[2026-03-03 03:47:09] 2026-03-03 08:46:22,089 | INFO     | neventsw: 0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,090 | INFO     | pid: 4473
[2026-03-03 03:47:09] 2026-03-03 08:46:22,090 | INFO     | pgrp: 4473
[2026-03-03 03:47:09] 2026-03-03 08:46:22,090 | INFO     | corecount: 8
[2026-03-03 03:47:09] 2026-03-03 08:46:22,090 | INFO     | event service: False
[2026-03-03 03:47:09] 2026-03-03 08:46:22,090 | INFO     | sizes: {0: 2281963, 1: 2282424, 11: 2282424, 7033: 2309651, 7034: 2318649, 7037: 2318705, 7039: 2319027}
[2026-03-03 03:47:09] 2026-03-03 08:46:22,090 | INFO     | --------------------------------------------------
[2026-03-03 03:47:09] 2026-03-03 08:46:22,091 | INFO     | 
[2026-03-03 03:47:09] 2026-03-03 08:46:22,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 03:47:09] 2026-03-03 08:46:22,120 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,121 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,121 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,121 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 03:47:09] 2026-03-03 08:46:22,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,124 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 03:47:09] 2026-03-03 08:46:22,124 | INFO     | job 7036089048 has completed (purged errors)
[2026-03-03 03:47:09] 2026-03-03 08:46:22,125 | INFO     | overall cleanup function is called
[2026-03-03 03:47:09] 2026-03-03 08:46:23,132 | INFO     | --- collectZombieJob: --- 10, [4473]
[2026-03-03 03:47:09] 2026-03-03 08:46:23,133 | INFO     | zombie collector waiting for pid 4473
[2026-03-03 03:47:09] 2026-03-03 08:46:23,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 03:47:09] 2026-03-03 08:46:23,133 | INFO     | collected zombie processes
[2026-03-03 03:47:09] 2026-03-03 08:46:23,133 | INFO     | will attempt to kill all subprocesses of pid=4473
[2026-03-03 03:47:09] 2026-03-03 08:46:23,218 | INFO     | process IDs to be killed: [4473] (in reverse order)
[2026-03-03 03:47:09] 2026-03-03 08:46:23,274 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 03:47:09] 2026-03-03 08:46:23,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 03:47:09] 2026-03-03 08:46:23,279 | INFO     | did not find any defunct processes belonging to 4473
[2026-03-03 03:47:09] 2026-03-03 08:46:23,283 | INFO     | did not find any defunct processes belonging to 4473
[2026-03-03 03:47:09] 2026-03-03 08:46:23,283 | INFO     | ready for new job
[2026-03-03 03:47:09] 2026-03-03 08:46:23,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 03:47:09] 2026-03-03 08:46:23,285 | INFO     | **************************************
[2026-03-03 03:47:09] 2026-03-03 08:46:23,285 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 03:47:09] 2026-03-03 08:46:23,285 | INFO     | **************************************
[2026-03-03 03:47:09] 2026-03-03 08:46:23,285 | INFO     | 
[2026-03-03 03:47:09] 2026-03-03 08:46:23,286 | INFO     | architecture information:
[2026-03-03 03:47:09] 2026-03-03 08:46:23,286 | INFO     | executing command: cat /etc/os-release
[2026-03-03 03:47:09] 2026-03-03 08:46:23,305 | INFO     | cat /etc/os-release:
[2026-03-03 03:47:09] NAME="CentOS Linux"
[2026-03-03 03:47:09] VERSION="7 (Core)"
[2026-03-03 03:47:09] ID="centos"
[2026-03-03 03:47:09] ID_LIKE="rhel fedora"
[2026-03-03 03:47:09] VERSION_ID="7"
[2026-03-03 03:47:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 03:47:09] ANSI_COLOR="0;31"
[2026-03-03 03:47:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 03:47:09] HOME_URL="https://www.centos.org/"
[2026-03-03 03:47:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 03:47:09] 
[2026-03-03 03:47:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 03:47:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 03:47:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 03:47:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 03:47:09] 
[2026-03-03 03:47:09] 2026-03-03 08:46:23,306 | INFO     | **************************************
[2026-03-03 03:47:09] 2026-03-03 08:46:23,809 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 03:47:09] 2026-03-03 08:46:23,827 | INFO     | sufficient remaining disk space (18481152000 B)
[2026-03-03 03:47:09] 2026-03-03 08:46:23,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 03:47:09] 2026-03-03 08:46:23,828 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 03:47:09] 2026-03-03 08:46:23,828 | INFO     | update_server=False
[2026-03-03 03:47:09] 2026-03-03 08:46:23,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 03:47:09] 2026-03-03 08:46:23,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 03:47:09] 2026-03-03 08:46:23,927 | INFO     | all data control threads have been joined
[2026-03-03 03:47:09] 2026-03-03 08:46:24,026 | INFO     | all job control threads have been joined
[2026-03-03 03:47:09] 2026-03-03 08:46:24,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 03:47:09] 2026-03-03 08:46:24,823 | INFO     | aborting loop
[2026-03-03 03:47:09] 2026-03-03 08:46:24,834 | INFO     | [job] retrieve thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:24,834 | INFO     | [job] queue monitor thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:24,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 03:47:09] 2026-03-03 08:46:24,892 | INFO     | [data] copytool_in thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:24,931 | INFO     | [data] control thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:24,970 | INFO     | [payload] validate_post thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:25,017 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:25,032 | INFO     | [job] control thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:25,271 | INFO     | [job] validate thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:25,284 | INFO     | all payload control threads have been joined
[2026-03-03 03:47:09] 2026-03-03 08:46:25,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 03:47:09] 2026-03-03 08:46:25,548 | INFO     | [payload] failed_post thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:25,828 | INFO     | [job] job monitor thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:25,899 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:26,080 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:26,275 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:26,289 | INFO     | [payload] control thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:26,893 | INFO     | [data] copytool_out thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:29,463 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 03:47:09] 2026-03-03 08:46:54,173 | INFO     | PID=32413 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 03:47:09] 2026-03-03 08:46:54,174 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 03:47:09] 2026-03-03 08:46:54,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 03:47:09] 2026-03-03 08:46:54,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 03:47:09] 2026-03-03 08:47:02,737 | INFO     | [monitor] cgroup control has ended
[2026-03-03 03:47:09] 2026-03-03 08:47:03,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507154761536)>', '<ExcThread(monitor, started 140505761445632)>']
[2026-03-03 03:47:09] 2026-03-03 08:47:04,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 03:47:09] 2026-03-03 08:47:04,226 | INFO     | [monitor] control thread has ended
[2026-03-03 03:47:09] 2026-03-03 08:47:09,004 | INFO     | all workflow threads have been joined
[2026-03-03 03:47:09] 2026-03-03 08:47:09,004 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 03:47:09] 2026-03-03 08:47:09,004 | INFO     | traces error code: 0
[2026-03-03 03:47:09] 2026-03-03 08:47:09,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 03:47:09] 2026-03-03 08:47:09,112 [wrapper] ==== pilot stdout END ====
[2026-03-03 03:47:09] 2026-03-03 08:47:09,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 03:47:09] 2026-03-03 08:47:09,122 [wrapper] pilotpid: 32413
[2026-03-03 03:47:09] 2026-03-03 08:47:09,126 [wrapper] Pilot exit status: 0
[2026-03-03 03:47:09] 2026-03-03 08:47:09,143 [wrapper] pandaids: 7036089048
[2026-03-03 03:47:09] 2026-03-03 08:47:09,194 [wrapper] cleanup supervisor_pilot 11414 32414
[2026-03-03 03:47:09] 2026-03-03 08:47:09,199 [wrapper] Test setup, not cleaning
[2026-03-03 03:47:09] 2026-03-03 08:47:09,204 [wrapper] apfmon messages muted
[2026-03-03 03:47:09] 2026-03-03 08:47:09,209 [wrapper] ==== wrapper stdout END ====
[2026-03-03 03:47:09] 2026-03-03 08:47:09,213 [wrapper] ==== wrapper stderr END ====
[2026-03-03 03:47:09]  *** Error codes and diagnostics ***
[2026-03-03 03:47:09]     "exeErrorCode": 0,
[2026-03-03 03:47:09]     "exeErrorDiag": "",
[2026-03-03 03:47:09]     "pilotErrorCode": 0,
[2026-03-03 03:47:09]     "pilotErrorDiag": "",
[2026-03-03 03:47:09]  *** Listing of results directory ***
[2026-03-03 03:47:09] total 419248
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 14:44 pilot3.tar.gz
[2026-03-03 03:47:09] -rwx------ 1 boincer umatlas     36322 Mar  2 14:48 runpilot2-wrapper.sh
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 14:49 queuedata.json
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas       100 Mar  3 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 03:47:09] -rwxr-xr-x 1 boincer umatlas      7986 Mar  3 01:48 run_atlas
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas       105 Mar  3 01:48 job.xml
[2026-03-03 03:47:09] -rw-r--r-- 2 boincer umatlas 253616509 Mar  3 01:48 EVNT.48457541._000001.pool.root.1
[2026-03-03 03:47:09] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 01:48 start_atlas.sh
[2026-03-03 03:47:09] drwxrwx--x 2 boincer umatlas      4096 Mar  3 01:48 shared
[2026-03-03 03:47:09] -rw-r--r-- 2 boincer umatlas    597979 Mar  3 01:48 input.tar.gz
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas         0 Mar  3 01:48 boinc_lockfile
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas      2673 Mar  3 01:48 pandaJob.out
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas        57 Mar  3 01:48 setup.sh.local
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas    998412 Mar  3 01:48 agis_schedconf.cvmfs.json
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas   1512931 Mar  3 01:48 agis_ddmendpoints.agis.ALL.json
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas       433 Mar  3 01:48 workernode_map.json
[2026-03-03 03:47:09] drwx------ 5 boincer umatlas      4096 Mar  3 01:48 pilot3
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas 169073870 Mar  3 03:45 HITS.48849721._000008.pool.root.1
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas       529 Mar  3 03:45 boinc_task_state.xml
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas      5909 Mar  3 03:46 init_data.xml
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas      1061 Mar  3 03:46 memory_monitor_summary.json
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas    351751 Mar  3 03:46 log.48849721._000008.job.log.tgz.1
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas      6390 Mar  3 03:46 heartbeat.json
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas        27 Mar  3 03:46 wrapper_checkpoint.txt
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 03:46 boinc_mmap_file
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas        95 Mar  3 03:46 pilot_heartbeat.json
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas      4742 Mar  3 03:47 pilotlog.txt
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas    996267 Mar  3 03:47 log.48849721._000008.job.log.1
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas       357 Mar  3 03:47 output.list
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas       620 Mar  3 03:47 runtime_log
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas   1361920 Mar  3 03:47 result.tar.gz
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas      9341 Mar  3 03:47 runtime_log.err
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas       658 Mar  3 03:47 11JMDmaQOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsaCLDmBOYrCn.diag
[2026-03-03 03:47:09] -rw-r--r-- 1 boincer umatlas     21268 Mar  3 03:47 stderr.txt
[2026-03-03 03:47:09] HITS file was successfully produced:
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas 169073870 Mar  3 03:45 shared/HITS.pool.root.1
[2026-03-03 03:47:09]  *** Contents of shared directory: ***
[2026-03-03 03:47:09] total 414720
[2026-03-03 03:47:09] -rw-r--r-- 2 boincer umatlas 253616509 Mar  3 01:48 ATLAS.root_0
[2026-03-03 03:47:09] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 01:48 start_atlas.sh
[2026-03-03 03:47:09] -rw-r--r-- 2 boincer umatlas    597979 Mar  3 01:48 input.tar.gz
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas 169073870 Mar  3 03:45 HITS.pool.root.1
[2026-03-03 03:47:09] -rw------- 1 boincer umatlas   1361920 Mar  3 03:47 result.tar.gz
03:47:10 (28448): run_atlas exited; CPU time 51501.335110
03:47:10 (28448): called boinc_finish(0)

</stderr_txt>
]]>

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