Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:35 (2662): wrapper (7.7.26015): starting
20:01:35 (2662): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 20:01:35] Arguments: --nthreads 8
[2026-03-03 20:01:35] Threads: 8
[2026-03-03 20:01:35] Checking for CVMFS
[2026-03-03 20:01:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 20:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 20:01:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 20:01:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 20:01:38] 2.11.2.0 21704 112129 136440 156853 2 53 15811289 25165825 899 130560 161 38308948 99.808 30864868 1090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 20:01:38] CVMFS is ok
[2026-03-03 20:01:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 20:01:38] Checking for apptainer binary...
[2026-03-03 20:01:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 20:01:38] Running /usr/bin/apptainer --version
[2026-03-03 20:01:38] apptainer version 1.3.2-1.el7
[2026-03-03 20:01:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 20:01:47] cg-vwn497.simple-grid.lan
[2026-03-03 20:01:47] apptainer works
[2026-03-03 20:01:47] Set ATHENA_PROC_NUMBER=8
[2026-03-03 20:01:47] Set ATHENA_CORE_NUMBER=8
[2026-03-03 20:01:47] Starting ATLAS job with PandaID=7036179575
[2026-03-03 20:01:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 23:17:05]  *** The last 200 lines of the pilot log: ***
[2026-03-03 23:17:05] 2026-03-03 22:16:27,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 23:17:05] 2026-03-03 22:16:27,797 | INFO     | fitting pss+swap vs Time
[2026-03-03 23:17:05] 2026-03-03 22:16:27,797 | INFO     | sum of square deviations: 1838657730.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,799 | INFO     | sum of deviations: 74328091238.99997
[2026-03-03 23:17:05] 2026-03-03 22:16:27,799 | INFO     | mean x: 1772570674.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,799 | INFO     | mean y: 2409685.861878453
[2026-03-03 23:17:05] 2026-03-03 22:16:27,799 | INFO     | intersect: -71654099644.26106
[2026-03-03 23:17:05] 2026-03-03 22:16:27,799 | INFO     | chi2: 10.769176791827915
[2026-03-03 23:17:05] 2026-03-03 22:16:27,800 | INFO     | sum of square deviations: 1690450300.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,801 | INFO     | sum of deviations: 84403272810.00003
[2026-03-03 23:17:05] 2026-03-03 22:16:27,801 | INFO     | mean x: 1772570521.5
[2026-03-03 23:17:05] 2026-03-03 22:16:27,801 | INFO     | mean y: 2419780.4318181816
[2026-03-03 23:17:05] 2026-03-03 22:16:27,801 | INFO     | intersect: -88501071449.762
[2026-03-03 23:17:05] 2026-03-03 22:16:27,802 | INFO     | chi2: 10.13555455164309
[2026-03-03 23:17:05] 2026-03-03 22:16:27,802 | INFO     | current chi2=10.13555455164309 (change=5.883664577460032 %)
[2026-03-03 23:17:05] 2026-03-03 22:16:27,802 | INFO     | right removable region: 175
[2026-03-03 23:17:05] 2026-03-03 22:16:27,802 | INFO     | sum of square deviations: 1690450300.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,808 | INFO     | sum of deviations: 10501184892.000008
[2026-03-03 23:17:05] 2026-03-03 22:16:27,808 | INFO     | mean x: 1772570826.5
[2026-03-03 23:17:05] 2026-03-03 22:16:27,808 | INFO     | mean y: 2475333.6136363638
[2026-03-03 23:17:05] 2026-03-03 22:16:27,808 | INFO     | intersect: -11008847497.493418
[2026-03-03 23:17:05] 2026-03-03 22:16:27,809 | INFO     | chi2: 4.978487487978933
[2026-03-03 23:17:05] 2026-03-03 22:16:27,809 | INFO     | current chi2=4.978487487978933 (change=53.77095590299149 %)
[2026-03-03 23:17:05] 2026-03-03 22:16:27,809 | INFO     | sum of square deviations: 1550429070.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,811 | INFO     | sum of deviations: -41166590845.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,811 | INFO     | mean x: 1772570979.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,811 | INFO     | mean y: 2531532.298245614
[2026-03-03 23:17:05] 2026-03-03 22:16:27,811 | INFO     | intersect: 47067376772.98642
[2026-03-03 23:17:05] 2026-03-03 22:16:27,811 | INFO     | chi2: 1.5368947571398623
[2026-03-03 23:17:05] 2026-03-03 22:16:27,812 | INFO     | current chi2=1.5368947571398623 (change=69.12928352535079 %)
[2026-03-03 23:17:05] 2026-03-03 22:16:27,812 | INFO     | sum of square deviations: 1418361477.5
[2026-03-03 23:17:05] 2026-03-03 22:16:27,813 | INFO     | sum of deviations: -56538579651.50001
[2026-03-03 23:17:05] 2026-03-03 22:16:27,813 | INFO     | mean x: 1772571131.5
[2026-03-03 23:17:05] 2026-03-03 22:16:27,814 | INFO     | mean y: 2549056.3433734938
[2026-03-03 23:17:05] 2026-03-03 22:16:27,814 | INFO     | intersect: 70660597583.51245
[2026-03-03 23:17:05] 2026-03-03 22:16:27,814 | INFO     | chi2: 0.959807912855364
[2026-03-03 23:17:05] 2026-03-03 22:16:27,814 | INFO     | current chi2=0.959807912855364 (change=37.548884958033696 %)
[2026-03-03 23:17:05] 2026-03-03 22:16:27,815 | INFO     | sum of square deviations: 1294014960.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,816 | INFO     | sum of deviations: -52384917173.99997
[2026-03-03 23:17:05] 2026-03-03 22:16:27,821 | INFO     | mean x: 1772571284.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,821 | INFO     | mean y: 2543952.0683229812
[2026-03-03 23:17:05] 2026-03-03 22:16:27,821 | INFO     | intersect: 71760601445.73964
[2026-03-03 23:17:05] 2026-03-03 22:16:27,822 | INFO     | chi2: 0.9602185656858051
[2026-03-03 23:17:05] 2026-03-03 22:16:27,822 | INFO     | current chi2=0.9602185656858051 (change=-0.04278489736757806 %)
[2026-03-03 23:17:05] 2026-03-03 22:16:27,822 | INFO     | left removable region: 40
[2026-03-03 23:17:05] 2026-03-03 22:16:27,822 | INFO     | sum of square deviations: 762879420.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,823 | INFO     | sum of deviations: -21147010849.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,823 | INFO     | mean x: 1772571711.0
[2026-03-03 23:17:05] 2026-03-03 22:16:27,824 | INFO     | mean y: 2530768.355555556
[2026-03-03 23:17:05] 2026-03-03 22:16:27,824 | INFO     | intersect: 49138203091.44364
[2026-03-03 23:17:05] 2026-03-03 22:16:27,824 | INFO     | chi2: 0.14353450129907633
[2026-03-03 23:17:05] 2026-03-03 22:16:27,824 | INFO     | current memory leak: -27.72 B/s (using 135 data points, chi2=0.14)
[2026-03-03 23:17:05] 2026-03-03 22:16:27,825 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-03-03 23:17:05] 2026-03-03 22:16:27,825 | INFO     | ..............................
[2026-03-03 23:17:05] 2026-03-03 22:16:27,825 | INFO     | . Timing measurements:
[2026-03-03 23:17:05] 2026-03-03 22:16:27,825 | INFO     | . get job = 0 s
[2026-03-03 23:17:05] 2026-03-03 22:16:27,825 | INFO     | . initial setup = 123 s
[2026-03-03 23:17:05] 2026-03-03 22:16:27,826 | INFO     | . payload setup = 149 s
[2026-03-03 23:17:05] 2026-03-03 22:16:27,826 | INFO     | . stage-in = 0 s
[2026-03-03 23:17:05] 2026-03-03 22:16:27,826 | INFO     | . payload execution = 11122 s
[2026-03-03 23:17:05] 2026-03-03 22:16:27,826 | INFO     | . stage-out = 6 s
[2026-03-03 23:17:05] 2026-03-03 22:16:27,826 | INFO     | . log creation = 1 s
[2026-03-03 23:17:05] 2026-03-03 22:16:27,826 | INFO     | ..............................
[2026-03-03 23:17:05] 2026-03-03 22:16:28,359 | INFO     | 
[2026-03-03 23:17:05] 2026-03-03 22:16:28,359 | INFO     | job summary report
[2026-03-03 23:17:05] 2026-03-03 22:16:28,359 | INFO     | --------------------------------------------------
[2026-03-03 23:17:05] 2026-03-03 22:16:28,359 | INFO     | PanDA job id: 7036179575
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | task id: 48700890
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | errors: (none)
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | pilot state: finished 
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | transexitcode: 0
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | exeerrorcode: 0
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | exeerrordiag: 
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | exitcode: 0
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | exitmsg: OK
[2026-03-03 23:17:05] 2026-03-03 22:16:28,360 | INFO     | cpuconsumptiontime: 40586 s
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | nevents: 400
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | neventsw: 0
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | pid: 11094
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | pgrp: 11094
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | corecount: 8
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | event service: False
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | sizes: {0: 2286521, 1: 2286982, 11275: 2316199, 11276: 2316198, 11283: 2325254, 11284: 2325310, 11285: 2325632}
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | --------------------------------------------------
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | 
[2026-03-03 23:17:05] 2026-03-03 22:16:28,361 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-03 23:17:05] 2026-03-03 22:16:28,956 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 23:17:05] 2026-03-03 22:16:28,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,959 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 23:17:05] 2026-03-03 22:16:28,959 | INFO     | job 7036179575 has completed (purged errors)
[2026-03-03 23:17:05] 2026-03-03 22:16:28,959 | INFO     | overall cleanup function is called
[2026-03-03 23:17:05] 2026-03-03 22:16:29,967 | INFO     | --- collectZombieJob: --- 10, [11094]
[2026-03-03 23:17:05] 2026-03-03 22:16:29,967 | INFO     | zombie collector waiting for pid 11094
[2026-03-03 23:17:05] 2026-03-03 22:16:29,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 23:17:05] 2026-03-03 22:16:29,967 | INFO     | collected zombie processes
[2026-03-03 23:17:05] 2026-03-03 22:16:29,968 | INFO     | will attempt to kill all subprocesses of pid=11094
[2026-03-03 23:17:05] 2026-03-03 22:16:30,054 | INFO     | process IDs to be killed: [11094] (in reverse order)
[2026-03-03 23:17:05] 2026-03-03 22:16:31,008 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 23:17:05] 2026-03-03 22:16:31,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 23:17:05] 2026-03-03 22:16:31,011 | INFO     | did not find any defunct processes belonging to 11094
[2026-03-03 23:17:05] 2026-03-03 22:16:31,012 | INFO     | did not find any defunct processes belonging to 11094
[2026-03-03 23:17:05] 2026-03-03 22:16:31,013 | INFO     | ready for new job
[2026-03-03 23:17:05] 2026-03-03 22:16:31,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 23:17:05] 2026-03-03 22:16:31,014 | INFO     | **************************************
[2026-03-03 23:17:05] 2026-03-03 22:16:31,015 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 23:17:05] 2026-03-03 22:16:31,015 | INFO     | **************************************
[2026-03-03 23:17:05] 2026-03-03 22:16:31,015 | INFO     | 
[2026-03-03 23:17:05] 2026-03-03 22:16:31,015 | INFO     | pilot is running in a VM
[2026-03-03 23:17:05] 2026-03-03 22:16:31,016 | INFO     | architecture information:
[2026-03-03 23:17:05] 2026-03-03 22:16:31,023 | INFO     | executing command: cat /etc/os-release
[2026-03-03 23:17:05] 2026-03-03 22:16:31,338 | INFO     | cat /etc/os-release:
[2026-03-03 23:17:05] NAME="CentOS Linux"
[2026-03-03 23:17:05] VERSION="7 (Core)"
[2026-03-03 23:17:05] ID="centos"
[2026-03-03 23:17:05] ID_LIKE="rhel fedora"
[2026-03-03 23:17:05] VERSION_ID="7"
[2026-03-03 23:17:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 23:17:05] ANSI_COLOR="0;31"
[2026-03-03 23:17:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 23:17:05] HOME_URL="https://www.centos.org/"
[2026-03-03 23:17:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 23:17:05] 
[2026-03-03 23:17:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 23:17:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 23:17:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 23:17:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 23:17:05] 
[2026-03-03 23:17:05] 2026-03-03 22:16:31,339 | INFO     | **************************************
[2026-03-03 23:17:05] 2026-03-03 22:16:31,842 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-03 23:17:05] 2026-03-03 22:16:32,102 | INFO     | sufficient remaining disk space (497075355648 B)
[2026-03-03 23:17:05] 2026-03-03 22:16:32,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 23:17:05] 2026-03-03 22:16:32,102 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 23:17:05] 2026-03-03 22:16:32,102 | INFO     | update_server=False
[2026-03-03 23:17:05] 2026-03-03 22:16:32,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 23:17:05] 2026-03-03 22:16:32,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 23:17:05] 2026-03-03 22:16:32,103 | INFO     | aborting loop
[2026-03-03 23:17:05] 2026-03-03 22:16:32,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 23:17:05] 2026-03-03 22:16:32,112 | INFO     | all data control threads have been joined
[2026-03-03 23:17:05] 2026-03-03 22:16:32,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 23:17:05] 2026-03-03 22:16:33,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 23:17:05] 2026-03-03 22:16:33,097 | INFO     | all payload control threads have been joined
[2026-03-03 23:17:05] 2026-03-03 22:16:33,108 | INFO     | [job] retrieve thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,109 | INFO     | [job] job monitor thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,118 | INFO     | [data] control thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,207 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,386 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,409 | INFO     | [job] validate thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,591 | INFO     | [payload] validate_post thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,664 | INFO     | all job control threads have been joined
[2026-03-03 23:17:05] 2026-03-03 22:16:33,749 | INFO     | [data] copytool_in thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,762 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,775 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:33,815 | INFO     | [payload] failed_post thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:34,015 | INFO     | [job] queue monitor thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:34,103 | INFO     | [payload] control thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:34,112 | INFO     | [data] copytool_out thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:34,670 | INFO     | [job] control thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:36,799 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 23:17:05] 2026-03-03 22:16:39,936 | INFO     | [monitor] cgroup control has ended
[2026-03-03 23:17:05] 2026-03-03 22:16:41,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857056655168)>', '<ExcThread(monitor, started 139856340576000)>']
[2026-03-03 23:17:05] 2026-03-03 22:16:46,451 | INFO     | all workflow threads have been joined
[2026-03-03 23:17:05] 2026-03-03 22:16:46,451 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 23:17:05] 2026-03-03 22:16:46,451 | INFO     | traces error code: 0
[2026-03-03 23:17:05] 2026-03-03 22:16:46,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 23:17:05] 2026-03-03 22:17:00,338 | INFO     | PID=6650 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-03 23:17:05] 2026-03-03 22:17:00,338 | INFO     | .. there are 2 such processes running
[2026-03-03 23:17:05] 2026-03-03 22:17:00,339 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 23:17:05] 2026-03-03 22:17:00,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 23:17:05] 2026-03-03 22:17:00,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 23:17:05] 2026-03-03 22:17:00,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 23:17:05] 2026-03-03 22:17:00,339 | CRITICAL | thread 'MainThread' is not alive
[2026-03-03 23:17:05] 2026-03-03 22:17:00,340 | INFO     | [monitor] control thread has ended
[2026-03-03 23:17:05] 2026-03-03 22:17:00,872 [wrapper] ==== pilot stdout END ====
[2026-03-03 23:17:05] 2026-03-03 22:17:00,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 23:17:05] 2026-03-03 22:17:01,104 [wrapper] pilotpid: 6650
[2026-03-03 23:17:05] 2026-03-03 22:17:01,222 [wrapper] Pilot exit status: 0
[2026-03-03 23:17:05] 2026-03-03 22:17:01,739 [wrapper] pandaids: 7036179575
[2026-03-03 23:17:05] 2026-03-03 22:17:02,798 [wrapper] cleanup supervisor_pilot 16682 6651
[2026-03-03 23:17:05] 2026-03-03 22:17:02,925 [wrapper] Test setup, not cleaning
[2026-03-03 23:17:05] 2026-03-03 22:17:03,043 [wrapper] apfmon messages muted
[2026-03-03 23:17:05] 2026-03-03 22:17:03,132 [wrapper] ==== wrapper stdout END ====
[2026-03-03 23:17:05] 2026-03-03 22:17:03,194 [wrapper] ==== wrapper stderr END ====
[2026-03-03 23:17:05]  *** Error codes and diagnostics ***
[2026-03-03 23:17:05]     "exeErrorCode": 0,
[2026-03-03 23:17:05]     "exeErrorDiag": "",
[2026-03-03 23:17:05]     "pilotErrorCode": 0,
[2026-03-03 23:17:05]     "pilotErrorDiag": "",
[2026-03-03 23:17:05]  *** Listing of results directory ***
[2026-03-03 23:17:05] total 342212
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc    584627 Mar  3 04:05 pilot3.tar.gz
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc      5111 Mar  3 04:05 queuedata.json
[2026-03-03 23:17:05] -rwx------. 1 boinc boinc     36322 Mar  3 04:05 runpilot2-wrapper.sh
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc       100 Mar  3 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 23:17:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 20:01 run_atlas
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc       105 Mar  3 20:01 job.xml
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc      6391 Mar  3 20:01 init_data.xml
[2026-03-03 23:17:05] -rw-r--r--. 2 boinc boinc 191655021 Mar  3 20:01 EVNT.48700888._000088.pool.root.1
[2026-03-03 23:17:05] -rw-r--r--. 2 boinc boinc     15845 Mar  3 20:01 start_atlas.sh
[2026-03-03 23:17:05] drwxrwx--x. 2 boinc boinc        68 Mar  3 20:01 shared
[2026-03-03 23:17:05] -rw-r--r--. 2 boinc boinc    597925 Mar  3 20:01 input.tar.gz
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc         0 Mar  3 20:01 boinc_lockfile
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc      2511 Mar  3 20:01 pandaJob.out
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc       415 Mar  3 20:08 workernode_map.json
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc    998492 Mar  3 20:08 agis_schedconf.cvmfs.json
[2026-03-03 23:17:05] drwx------. 5 boinc boinc      4096 Mar  3 20:08 pilot3
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc 150818268 Mar  3 23:14 HITS.48700890._001861.pool.root.1
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc       531 Mar  3 23:15 boinc_task_state.xml
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc      1012 Mar  3 23:16 memory_monitor_summary.json
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc   1516092 Mar  3 23:16 agis_ddmendpoints.agis.ALL.json
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc    418619 Mar  3 23:16 log.48700890._001861.job.log.tgz.1
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc      6320 Mar  3 23:16 heartbeat.json
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc        28 Mar  3 23:16 wrapper_checkpoint.txt
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc      8192 Mar  3 23:16 boinc_mmap_file
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc        95 Mar  3 23:17 pilot_heartbeat.json
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc       889 Mar  3 23:17 pilotlog.txt
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc   1600051 Mar  3 23:17 log.48700890._001861.job.log.1
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc       357 Mar  3 23:17 output.list
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc       620 Mar  3 23:17 runtime_log
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc   2037760 Mar  3 23:17 result.tar.gz
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc      8832 Mar  3 23:17 runtime_log.err
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc       655 Mar  3 23:17 9fHKDmwFVH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmSLDLDm5g6VYn.diag
[2026-03-03 23:17:05] -rw-r--r--. 1 boinc boinc     20554 Mar  3 23:17 stderr.txt
[2026-03-03 23:17:05] HITS file was successfully produced:
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc 150818268 Mar  3 23:14 shared/HITS.pool.root.1
[2026-03-03 23:17:05]  *** Contents of shared directory: ***
[2026-03-03 23:17:05] total 337040
[2026-03-03 23:17:05] -rw-r--r--. 2 boinc boinc 191655021 Mar  3 20:01 ATLAS.root_0
[2026-03-03 23:17:05] -rw-r--r--. 2 boinc boinc     15845 Mar  3 20:01 start_atlas.sh
[2026-03-03 23:17:05] -rw-r--r--. 2 boinc boinc    597925 Mar  3 20:01 input.tar.gz
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc 150818268 Mar  3 23:14 HITS.pool.root.1
[2026-03-03 23:17:05] -rw-------. 1 boinc boinc   2037760 Mar  3 23:17 result.tar.gz
23:17:07 (2662): run_atlas exited; CPU time 40698.387243
23:17:07 (2662): called boinc_finish(0)

</stderr_txt>
]]>

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