Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:59:06 (11369): wrapper (7.7.26015): starting
00:59:06 (11369): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 00:59:06] Arguments: --nthreads 12
[2026-03-03 00:59:06] Threads: 12
[2026-03-03 00:59:06] Checking for CVMFS
[2026-03-03 00:59:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:59:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:59:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:59:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:59:07] 2.11.2.0 3173 3657 82396 156834 2 51 10419720 20275201 1 130560 0 1989273 99.987 134995 48006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 00:59:07] CVMFS is ok
[2026-03-03 00:59:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:59:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:59:07] Further information can be found at the LHC@home message board.
[2026-03-03 00:59:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:59:07] Checking for apptainer binary...
[2026-03-03 00:59:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:59:07] Running /usr/bin/apptainer --version
[2026-03-03 00:59:07] apptainer version 1.3.2-1.el7
[2026-03-03 00:59:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:59:08] c-115-40.aglt2.org
[2026-03-03 00:59:08] apptainer works
[2026-03-03 00:59:08] Set ATHENA_PROC_NUMBER=12
[2026-03-03 00:59:08] Set ATHENA_CORE_NUMBER=12
[2026-03-03 00:59:08] Starting ATLAS job with PandaID=7036183445
[2026-03-03 00:59:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 02:12:40]  *** The last 200 lines of the pilot log: ***
[2026-03-03 02:12:40]  direct_access_wan=False
[2026-03-03 02:12:40]  domain=
[2026-03-03 02:12:40]  filesize=380576
[2026-03-03 02:12:40]  filetype=log
[2026-03-03 02:12:40]  guid=9e39e307-508f-45c4-a450-3305eb7a56af
[2026-03-03 02:12:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 02:12:40]  is_altstaged=None
[2026-03-03 02:12:40]  is_tar=False
[2026-03-03 02:12:40]  lfn=log.48838536._002396.job.log.tgz.1
[2026-03-03 02:12:40]  mtime=0
[2026-03-03 02:12:40]  protocol_id=None
[2026-03-03 02:12:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 02:12:40]  replicas=None
[2026-03-03 02:12:40]  scope=mc23_13p6TeV
[2026-03-03 02:12:40]  status=None
[2026-03-03 02:12:40]  status_code=0
[2026-03-03 02:12:40]  storage_token=
[2026-03-03 02:12:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7036183445/log.48838536._002396.job.log.tgz.1
[2026-03-03 02:12:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/49/log.48838536._002396.job.log.tgz.1
[2026-03-03 02:12:40]  workdir=None
[2026-03-03 02:12:40] ]
[2026-03-03 02:12:40] 2026-03-03 07:11:57,938 | INFO     | transferring file log.48838536._002396.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7036183445/log.48838536._002396.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-03 02:12:40] 2026-03-03 07:11:57,939 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7036183445/log.48838536._002396.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838536._002396.job
[2026-03-03 02:12:40] 2026-03-03 07:11:57,961 | INFO     | adding to output.list: log.48838536._002396.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/49/log.48838536._002396.job.log.tg
[2026-03-03 02:12:40] 2026-03-03 07:11:57,962 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 02:12:40] 2026-03-03 07:11:57,962 | INFO     | summary of transferred files:
[2026-03-03 02:12:40] 2026-03-03 07:11:57,963 | INFO     |  -- lfn=log.48838536._002396.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 02:12:40] 2026-03-03 07:11:57,963 | INFO     | stage-out finished correctly
[2026-03-03 02:12:40] 2026-03-03 07:11:58,203 | INFO     | monitor loop #331: job 0:7036183445 is in state 'finished'
[2026-03-03 02:12:40] 2026-03-03 07:11:58,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 02:12:40] 2026-03-03 07:11:58,746 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 02:12:40] 2026-03-03 07:11:59,357 | INFO     | job 7036183445 has state=finished
[2026-03-03 02:12:40] 2026-03-03 07:11:59,358 | INFO     | preparing for final server update for job 7036183445 in state='finished'
[2026-03-03 02:12:40] 2026-03-03 07:11:59,358 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036183445/jobReport.json
[2026-03-03 02:12:40] 2026-03-03 07:11:59,361 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 02:12:40] 2026-03-03 07:11:59,361 | INFO     | this job has now completed (state=finished)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,362 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,362 | INFO     | log transfer has been attempted: DONE
[2026-03-03 02:12:40] 2026-03-03 07:11:59,362 | INFO     | job 7036183445 has finished - writing final server update
[2026-03-03 02:12:40] 2026-03-03 07:11:59,362 | INFO     | total number of processed events: 400 (read)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,365 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036183445/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,366 | INFO     | extracted standard info from prmon json
[2026-03-03 02:12:40] 2026-03-03 07:11:59,366 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 02:12:40] 2026-03-03 07:11:59,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 02:12:40] 2026-03-03 07:11:59,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 02:12:40] 2026-03-03 07:11:59,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 02:12:40] 2026-03-03 07:11:59,368 | INFO     | fitting pss+swap vs Time
[2026-03-03 02:12:40] 2026-03-03 07:11:59,368 | INFO     | sum of square deviations: 81266640.0
[2026-03-03 02:12:40] 2026-03-03 07:11:59,369 | INFO     | sum of deviations: -2731766477.0
[2026-03-03 02:12:40] 2026-03-03 07:11:59,369 | INFO     | mean x: 1772519818.5
[2026-03-03 02:12:40] 2026-03-03 07:11:59,369 | INFO     | mean y: 2768192.21875
[2026-03-03 02:12:40] 2026-03-03 07:11:59,369 | INFO     | intersect: 59585768301.44468
[2026-03-03 02:12:40] 2026-03-03 07:11:59,369 | INFO     | chi2: 0.0458706234536109
[2026-03-03 02:12:40] 2026-03-03 07:11:59,369 | INFO     | current memory leak: -33.61 B/s (using 64 data points, chi2=0.05)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | ..............................
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | . Timing measurements:
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | . get job = 0 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | . initial setup = 7 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | . payload setup = 7 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | . stage-in = 0 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | . payload execution = 4326 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,370 | INFO     | . stage-out = 0 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,371 | INFO     | . log creation = 0 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,371 | INFO     | ..............................
[2026-03-03 02:12:40] 2026-03-03 07:11:59,440 | INFO     | 
[2026-03-03 02:12:40] 2026-03-03 07:11:59,440 | INFO     | job summary report
[2026-03-03 02:12:40] 2026-03-03 07:11:59,440 | INFO     | --------------------------------------------------
[2026-03-03 02:12:40] 2026-03-03 07:11:59,440 | INFO     | PanDA job id: 7036183445
[2026-03-03 02:12:40] 2026-03-03 07:11:59,440 | INFO     | task id: 48838536
[2026-03-03 02:12:40] 2026-03-03 07:11:59,440 | INFO     | errors: (none)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 02:12:40] 2026-03-03 07:11:59,441 | INFO     | pilot state: finished 
[2026-03-03 02:12:40] 2026-03-03 07:11:59,441 | INFO     | transexitcode: 0
[2026-03-03 02:12:40] 2026-03-03 07:11:59,441 | INFO     | exeerrorcode: 0
[2026-03-03 02:12:40] 2026-03-03 07:11:59,441 | INFO     | exeerrordiag: 
[2026-03-03 02:12:40] 2026-03-03 07:11:59,441 | INFO     | exitcode: 0
[2026-03-03 02:12:40] 2026-03-03 07:11:59,441 | INFO     | exitmsg: OK
[2026-03-03 02:12:40] 2026-03-03 07:11:59,442 | INFO     | cpuconsumptiontime: 47561 s
[2026-03-03 02:12:40] 2026-03-03 07:11:59,442 | INFO     | nevents: 400
[2026-03-03 02:12:40] 2026-03-03 07:11:59,442 | INFO     | neventsw: 0
[2026-03-03 02:12:40] 2026-03-03 07:11:59,442 | INFO     | pid: 19795
[2026-03-03 02:12:40] 2026-03-03 07:11:59,442 | INFO     | pgrp: 19795
[2026-03-03 02:12:40] 2026-03-03 07:11:59,442 | INFO     | corecount: 12
[2026-03-03 02:12:40] 2026-03-03 07:11:59,442 | INFO     | event service: False
[2026-03-03 02:12:40] 2026-03-03 07:11:59,443 | INFO     | sizes: {0: 2282025, 1: 2282231, 11: 2282259, 4337: 2308306, 4338: 2317304, 4339: 2317682}
[2026-03-03 02:12:40] 2026-03-03 07:11:59,443 | INFO     | --------------------------------------------------
[2026-03-03 02:12:40] 2026-03-03 07:11:59,443 | INFO     | 
[2026-03-03 02:12:40] 2026-03-03 07:11:59,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 02:12:40] 2026-03-03 07:11:59,467 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,467 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,467 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,467 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,469 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,470 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 02:12:40] 2026-03-03 07:11:59,470 | INFO     | job 7036183445 has completed (purged errors)
[2026-03-03 02:12:40] 2026-03-03 07:11:59,470 | INFO     | overall cleanup function is called
[2026-03-03 02:12:40] 2026-03-03 07:12:00,478 | INFO     | --- collectZombieJob: --- 10, [19795]
[2026-03-03 02:12:40] 2026-03-03 07:12:00,478 | INFO     | zombie collector waiting for pid 19795
[2026-03-03 02:12:40] 2026-03-03 07:12:00,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 02:12:40] 2026-03-03 07:12:00,478 | INFO     | collected zombie processes
[2026-03-03 02:12:40] 2026-03-03 07:12:00,479 | INFO     | will attempt to kill all subprocesses of pid=19795
[2026-03-03 02:12:40] 2026-03-03 07:12:00,565 | INFO     | process IDs to be killed: [19795] (in reverse order)
[2026-03-03 02:12:40] 2026-03-03 07:12:00,615 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 02:12:40] 2026-03-03 07:12:00,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 02:12:40] 2026-03-03 07:12:00,619 | INFO     | did not find any defunct processes belonging to 19795
[2026-03-03 02:12:40] 2026-03-03 07:12:00,621 | INFO     | did not find any defunct processes belonging to 19795
[2026-03-03 02:12:40] 2026-03-03 07:12:00,622 | INFO     | ready for new job
[2026-03-03 02:12:40] 2026-03-03 07:12:00,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 02:12:40] 2026-03-03 07:12:00,623 | INFO     | **************************************
[2026-03-03 02:12:40] 2026-03-03 07:12:00,623 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 02:12:40] 2026-03-03 07:12:00,623 | INFO     | **************************************
[2026-03-03 02:12:40] 2026-03-03 07:12:00,623 | INFO     | 
[2026-03-03 02:12:40] 2026-03-03 07:12:00,624 | INFO     | architecture information:
[2026-03-03 02:12:40] 2026-03-03 07:12:00,625 | INFO     | executing command: cat /etc/os-release
[2026-03-03 02:12:40] 2026-03-03 07:12:00,640 | INFO     | cat /etc/os-release:
[2026-03-03 02:12:40] NAME="CentOS Linux"
[2026-03-03 02:12:40] VERSION="7 (Core)"
[2026-03-03 02:12:40] ID="centos"
[2026-03-03 02:12:40] ID_LIKE="rhel fedora"
[2026-03-03 02:12:40] VERSION_ID="7"
[2026-03-03 02:12:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 02:12:40] ANSI_COLOR="0;31"
[2026-03-03 02:12:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 02:12:40] HOME_URL="https://www.centos.org/"
[2026-03-03 02:12:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 02:12:40] 
[2026-03-03 02:12:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 02:12:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 02:12:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 02:12:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 02:12:40] 
[2026-03-03 02:12:40] 2026-03-03 07:12:00,641 | INFO     | **************************************
[2026-03-03 02:12:40] 2026-03-03 07:12:01,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 02:12:40] 2026-03-03 07:12:01,160 | INFO     | sufficient remaining disk space (18571329536 B)
[2026-03-03 02:12:40] 2026-03-03 07:12:01,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 02:12:40] 2026-03-03 07:12:01,161 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 02:12:40] 2026-03-03 07:12:01,161 | INFO     | update_server=False
[2026-03-03 02:12:40] 2026-03-03 07:12:01,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 02:12:40] 2026-03-03 07:12:01,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 02:12:40] 2026-03-03 07:12:01,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:12:40] 2026-03-03 07:12:01,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 02:12:40] 2026-03-03 07:12:01,572 | INFO     | all job control threads have been joined
[2026-03-03 02:12:40] 2026-03-03 07:12:01,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:12:40] 2026-03-03 07:12:01,720 | INFO     | aborting loop
[2026-03-03 02:12:40] 2026-03-03 07:12:01,734 | INFO     | all data control threads have been joined
[2026-03-03 02:12:40] 2026-03-03 07:12:02,058 | INFO     | all payload control threads have been joined
[2026-03-03 02:12:40] 2026-03-03 07:12:02,167 | INFO     | [job] retrieve thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:02,167 | INFO     | [job] queue monitor thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:02,503 | INFO     | [payload] failed_post thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:02,577 | INFO     | [job] control thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:02,623 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:02,726 | INFO     | [job] job monitor thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:02,736 | INFO     | [data] control thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:03,063 | INFO     | [payload] control thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:03,072 | INFO     | [payload] validate_post thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:03,131 | INFO     | [job] validate thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:03,168 | INFO     | [data] copytool_out thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:03,209 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:03,392 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:03,611 | INFO     | [data] copytool_in thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:05,167 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:11,827 | INFO     | job.realtimelogging is not enabled
[2026-03-03 02:12:40] 2026-03-03 07:12:12,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 02:12:40] 2026-03-03 07:12:30,819 | INFO     | PID=15353 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 02:12:40] 2026-03-03 07:12:30,820 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 02:12:40] 2026-03-03 07:12:30,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 02:12:40] 2026-03-03 07:12:30,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 02:12:40] 2026-03-03 07:12:35,205 | INFO     | [monitor] cgroup control has ended
[2026-03-03 02:12:40] 2026-03-03 07:12:35,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550166693696)>', '<ExcThread(monitor, started 140549474461440)>']
[2026-03-03 02:12:40] 2026-03-03 07:12:35,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 02:12:40] 2026-03-03 07:12:35,841 | INFO     | [monitor] control thread has ended
[2026-03-03 02:12:40] 2026-03-03 07:12:40,386 | INFO     | all workflow threads have been joined
[2026-03-03 02:12:40] 2026-03-03 07:12:40,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 02:12:40] 2026-03-03 07:12:40,395 | INFO     | traces error code: 0
[2026-03-03 02:12:40] 2026-03-03 07:12:40,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 02:12:40] 2026-03-03 07:12:40,481 [wrapper] ==== pilot stdout END ====
[2026-03-03 02:12:40] 2026-03-03 07:12:40,485 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 02:12:40] 2026-03-03 07:12:40,488 [wrapper] pilotpid: 15353
[2026-03-03 02:12:40] 2026-03-03 07:12:40,492 [wrapper] Pilot exit status: 0
[2026-03-03 02:12:40] 2026-03-03 07:12:40,507 [wrapper] pandaids: 7036183445
[2026-03-03 02:12:40] 2026-03-03 07:12:40,547 [wrapper] cleanup supervisor_pilot 11671 15354
[2026-03-03 02:12:40] 2026-03-03 07:12:40,551 [wrapper] Test setup, not cleaning
[2026-03-03 02:12:40] 2026-03-03 07:12:40,555 [wrapper] apfmon messages muted
[2026-03-03 02:12:40] 2026-03-03 07:12:40,558 [wrapper] ==== wrapper stdout END ====
[2026-03-03 02:12:40] 2026-03-03 07:12:40,562 [wrapper] ==== wrapper stderr END ====
[2026-03-03 02:12:40]  *** Error codes and diagnostics ***
[2026-03-03 02:12:40]     "exeErrorCode": 0,
[2026-03-03 02:12:40]     "exeErrorDiag": "",
[2026-03-03 02:12:40]     "pilotErrorCode": 0,
[2026-03-03 02:12:40]     "pilotErrorDiag": "",
[2026-03-03 02:12:40]  *** Listing of results directory ***
[2026-03-03 02:12:40] total 465296
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 22:05 pilot3.tar.gz
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 22:05 queuedata.json
[2026-03-03 02:12:40] -rwx------ 1 boincer umatlas     36322 Mar  2 22:05 runpilot2-wrapper.sh
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas       100 Mar  3 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 02:12:40] -rwxr-xr-x 1 boincer umatlas      7986 Mar  3 00:59 run_atlas
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas       105 Mar  3 00:59 job.xml
[2026-03-03 02:12:40] -rw-r--r-- 2 boincer umatlas 269314546 Mar  3 00:59 EVNT.48343704._000032.pool.root.1
[2026-03-03 02:12:40] drwxrwx--x 2 boincer umatlas      4096 Mar  3 00:59 shared
[2026-03-03 02:12:40] -rw-r--r-- 2 boincer umatlas    597972 Mar  3 00:59 input.tar.gz
[2026-03-03 02:12:40] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 00:59 start_atlas.sh
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas         0 Mar  3 00:59 boinc_lockfile
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas      2572 Mar  3 00:59 pandaJob.out
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas        57 Mar  3 00:59 setup.sh.local
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas    997730 Mar  3 00:59 agis_schedconf.cvmfs.json
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas   1512931 Mar  3 00:59 agis_ddmendpoints.agis.ALL.json
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas       445 Mar  3 00:59 workernode_map.json
[2026-03-03 02:12:40] drwx------ 5 boincer umatlas      4096 Mar  3 00:59 pilot3
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas      5953 Mar  3 02:10 init_data.xml
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas 201184181 Mar  3 02:11 HITS.48838536._002396.pool.root.1
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas       529 Mar  3 02:11 boinc_task_state.xml
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas      1044 Mar  3 02:11 memory_monitor_summary.json
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas    380576 Mar  3 02:11 log.48838536._002396.job.log.tgz.1
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas      6408 Mar  3 02:11 heartbeat.json
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 02:12 boinc_mmap_file
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas        27 Mar  3 02:12 wrapper_checkpoint.txt
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas        95 Mar  3 02:12 pilot_heartbeat.json
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas      4814 Mar  3 02:12 pilotlog.txt
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas    636254 Mar  3 02:12 log.48838536._002396.job.log.1
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas       357 Mar  3 02:12 output.list
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas       620 Mar  3 02:12 runtime_log
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas   1034240 Mar  3 02:12 result.tar.gz
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas      9343 Mar  3 02:12 runtime_log.err
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas       659 Mar  3 02:12 7gYKDmyFVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzNFLDmiRo4Nm.diag
[2026-03-03 02:12:40] -rw-r--r-- 1 boincer umatlas     21004 Mar  3 02:12 stderr.txt
[2026-03-03 02:12:40] HITS file was successfully produced:
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas 201184181 Mar  3 02:11 shared/HITS.pool.root.1
[2026-03-03 02:12:40]  *** Contents of shared directory: ***
[2026-03-03 02:12:40] total 461092
[2026-03-03 02:12:40] -rw-r--r-- 2 boincer umatlas 269314546 Mar  3 00:59 ATLAS.root_0
[2026-03-03 02:12:40] -rw-r--r-- 2 boincer umatlas    597972 Mar  3 00:59 input.tar.gz
[2026-03-03 02:12:40] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 00:59 start_atlas.sh
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas 201184181 Mar  3 02:11 HITS.pool.root.1
[2026-03-03 02:12:40] -rw------- 1 boincer umatlas   1034240 Mar  3 02:12 result.tar.gz
02:12:42 (11369): run_atlas exited; CPU time 47562.063944
02:12:42 (11369): called boinc_finish(0)

</stderr_txt>
]]>

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