Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:12 (642): wrapper (7.7.26015): starting
16:37:12 (642): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 16:37:12] Arguments: --nthreads 8
[2026-03-03 16:37:12] Threads: 8
[2026-03-03 16:37:12] Checking for CVMFS
[2026-03-03 16:37:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 16:37:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 16:37:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 16:37:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 16:37:15] 2.11.2.0 31778 80181 132768 156849 0 53 21352225 25165824 899 130560 156 23396321 99.794 17860295 650 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 16:37:15] CVMFS is ok
[2026-03-03 16:37:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 16:37:15] Checking for apptainer binary...
[2026-03-03 16:37:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 16:37:15] Running /usr/bin/apptainer --version
[2026-03-03 16:37:15] apptainer version 1.3.2-1.el7
[2026-03-03 16:37:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 16:37:20] cg-vwn373.simple-grid.lan
[2026-03-03 16:37:20] apptainer works
[2026-03-03 16:37:20] Set ATHENA_PROC_NUMBER=8
[2026-03-03 16:37:20] Set ATHENA_CORE_NUMBER=8
[2026-03-03 16:37:20] Starting ATLAS job with PandaID=7034444427
[2026-03-03 16:37:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 21:33:20]  *** The last 200 lines of the pilot log: ***
[2026-03-03 21:33:20] 2026-03-03 20:32:43,150 | INFO     | sum of square deviations: 6734191380.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,153 | INFO     | sum of deviations: 163137412531.99997
[2026-03-03 21:33:20] 2026-03-03 20:32:43,153 | INFO     | mean x: 1772561412.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,153 | INFO     | mean y: 2440530.82437276
[2026-03-03 21:33:20] 2026-03-03 20:32:43,154 | INFO     | intersect: -42938287760.11237
[2026-03-03 21:33:20] 2026-03-03 20:32:43,154 | INFO     | chi2: 9.481969079501889
[2026-03-03 21:33:20] 2026-03-03 20:32:43,155 | INFO     | sum of square deviations: 6378584712.5
[2026-03-03 21:33:20] 2026-03-03 20:32:43,162 | INFO     | sum of deviations: 178940307534.5
[2026-03-03 21:33:20] 2026-03-03 20:32:43,163 | INFO     | mean x: 1772561259.5
[2026-03-03 21:33:20] 2026-03-03 20:32:43,163 | INFO     | mean y: 2447188.901459854
[2026-03-03 21:33:20] 2026-03-03 20:32:43,163 | INFO     | intersect: -49723733648.219574
[2026-03-03 21:33:20] 2026-03-03 20:32:43,164 | INFO     | chi2: 8.755603516688092
[2026-03-03 21:33:20] 2026-03-03 20:32:43,164 | INFO     | current chi2=8.755603516688092 (change=7.660492844087133 %)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,164 | INFO     | right removable region: 273
[2026-03-03 21:33:20] 2026-03-03 20:32:43,164 | INFO     | sum of square deviations: 6378584712.5
[2026-03-03 21:33:20] 2026-03-03 20:32:43,167 | INFO     | sum of deviations: 63835989734.999985
[2026-03-03 21:33:20] 2026-03-03 20:32:43,167 | INFO     | mean x: 1772561564.5
[2026-03-03 21:33:20] 2026-03-03 20:32:43,167 | INFO     | mean y: 2483098.2262773723
[2026-03-03 21:33:20] 2026-03-03 20:32:43,168 | INFO     | intersect: -17737066807.62245
[2026-03-03 21:33:20] 2026-03-03 20:32:43,168 | INFO     | chi2: 4.243871036335651
[2026-03-03 21:33:20] 2026-03-03 20:32:43,168 | INFO     | current chi2=4.243871036335651 (change=55.24272436713543 %)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,174 | INFO     | sum of square deviations: 6035722470.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,176 | INFO     | sum of deviations: -13783740743.000004
[2026-03-03 21:33:20] 2026-03-03 20:32:43,177 | INFO     | mean x: 1772561717.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,177 | INFO     | mean y: 2517591.3382899626
[2026-03-03 21:33:20] 2026-03-03 20:32:43,177 | INFO     | intersect: 4050505430.330983
[2026-03-03 21:33:20] 2026-03-03 20:32:43,177 | INFO     | chi2: 1.278068914179583
[2026-03-03 21:33:20] 2026-03-03 20:32:43,178 | INFO     | current chi2=1.278068914179583 (change=69.8843602164894 %)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,178 | INFO     | sum of square deviations: 5705372090.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,181 | INFO     | sum of deviations: -33659237702.000008
[2026-03-03 21:33:20] 2026-03-03 20:32:43,181 | INFO     | mean x: 1772561869.5
[2026-03-03 21:33:20] 2026-03-03 20:32:43,181 | INFO     | mean y: 2526690.537878788
[2026-03-03 21:33:20] 2026-03-03 20:32:43,181 | INFO     | intersect: 10459878177.143902
[2026-03-03 21:33:20] 2026-03-03 20:32:43,181 | INFO     | chi2: 0.9398349154070755
[2026-03-03 21:33:20] 2026-03-03 20:32:43,182 | INFO     | current chi2=0.9398349154070755 (change=26.464457042962064 %)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,182 | INFO     | sum of square deviations: 5387301010.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,185 | INFO     | sum of deviations: -25486919045.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,185 | INFO     | mean x: 1772562022.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,185 | INFO     | mean y: 2522768.247104247
[2026-03-03 21:33:20] 2026-03-03 20:32:43,185 | INFO     | intersect: 8388381414.923227
[2026-03-03 21:33:20] 2026-03-03 20:32:43,186 | INFO     | chi2: 0.9162945120039594
[2026-03-03 21:33:20] 2026-03-03 20:32:43,186 | INFO     | current chi2=0.9162945120039594 (change=2.5047381212603663 %)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,186 | INFO     | left removable region: 40
[2026-03-03 21:33:20] 2026-03-03 20:32:43,186 | INFO     | sum of square deviations: 3922276332.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,188 | INFO     | sum of deviations: 7922425447.000001
[2026-03-03 21:33:20] 2026-03-03 20:32:43,189 | INFO     | mean x: 1772562449.0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,189 | INFO     | mean y: 2523421.557939914
[2026-03-03 21:33:20] 2026-03-03 20:32:43,189 | INFO     | intersect: -3577793890.046061
[2026-03-03 21:33:20] 2026-03-03 20:32:43,189 | INFO     | chi2: 0.0004566024784815623
[2026-03-03 21:33:20] 2026-03-03 20:32:43,189 | INFO     | current memory leak: 2.02 B/s (using 233 data points, chi2=0.00)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,190 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,190 | INFO     | ..............................
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . Timing measurements:
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . get job = 0 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . initial setup = 119 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . payload setup = 165 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . stage-in = 0 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . payload execution = 17154 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . stage-out = 3 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | . log creation = 1 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,191 | INFO     | ..............................
[2026-03-03 21:33:20] 2026-03-03 20:32:43,721 | INFO     | 
[2026-03-03 21:33:20] 2026-03-03 20:32:43,722 | INFO     | job summary report
[2026-03-03 21:33:20] 2026-03-03 20:32:43,722 | INFO     | --------------------------------------------------
[2026-03-03 21:33:20] 2026-03-03 20:32:43,722 | INFO     | PanDA job id: 7034444427
[2026-03-03 21:33:20] 2026-03-03 20:32:43,722 | INFO     | task id: 48838521
[2026-03-03 21:33:20] 2026-03-03 20:32:43,722 | INFO     | errors: (none)
[2026-03-03 21:33:20] 2026-03-03 20:32:43,722 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 21:33:20] 2026-03-03 20:32:43,722 | INFO     | pilot state: finished 
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | transexitcode: 0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | exeerrorcode: 0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | exeerrordiag: 
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | exitcode: 0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | exitmsg: OK
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | cpuconsumptiontime: 64722 s
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | nevents: 400
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | neventsw: 0
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | pid: 9094
[2026-03-03 21:33:20] 2026-03-03 20:32:43,723 | INFO     | pgrp: 9094
[2026-03-03 21:33:20] 2026-03-03 20:32:43,724 | INFO     | corecount: 8
[2026-03-03 21:33:20] 2026-03-03 20:32:43,724 | INFO     | event service: False
[2026-03-03 21:33:20] 2026-03-03 20:32:43,724 | INFO     | sizes: {0: 2286585, 1: 2286669, 2: 2287130, 12: 2287130, 17324: 2319243, 17325: 2319242, 17330: 2328482, 17333: 2328620}
[2026-03-03 21:33:20] 2026-03-03 20:32:43,724 | INFO     | --------------------------------------------------
[2026-03-03 21:33:20] 2026-03-03 20:32:43,724 | INFO     | 
[2026-03-03 21:33:20] 2026-03-03 20:32:43,724 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-03 21:33:20] 2026-03-03 20:32:44,165 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,165 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,167 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 21:33:20] 2026-03-03 20:32:44,168 | INFO     | job 7034444427 has completed (purged errors)
[2026-03-03 21:33:20] 2026-03-03 20:32:44,168 | INFO     | overall cleanup function is called
[2026-03-03 21:33:20] 2026-03-03 20:32:45,176 | INFO     | --- collectZombieJob: --- 10, [9094]
[2026-03-03 21:33:20] 2026-03-03 20:32:45,177 | INFO     | zombie collector waiting for pid 9094
[2026-03-03 21:33:20] 2026-03-03 20:32:45,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 21:33:20] 2026-03-03 20:32:45,177 | INFO     | collected zombie processes
[2026-03-03 21:33:20] 2026-03-03 20:32:45,177 | INFO     | will attempt to kill all subprocesses of pid=9094
[2026-03-03 21:33:20] 2026-03-03 20:32:45,264 | INFO     | process IDs to be killed: [9094] (in reverse order)
[2026-03-03 21:33:20] 2026-03-03 20:32:46,129 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 21:33:20] 2026-03-03 20:32:46,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 21:33:20] 2026-03-03 20:32:46,132 | INFO     | did not find any defunct processes belonging to 9094
[2026-03-03 21:33:20] 2026-03-03 20:32:46,134 | INFO     | did not find any defunct processes belonging to 9094
[2026-03-03 21:33:20] 2026-03-03 20:32:46,134 | INFO     | ready for new job
[2026-03-03 21:33:20] 2026-03-03 20:32:46,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 21:33:20] 2026-03-03 20:32:46,136 | INFO     | **************************************
[2026-03-03 21:33:20] 2026-03-03 20:32:46,137 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 21:33:20] 2026-03-03 20:32:46,137 | INFO     | **************************************
[2026-03-03 21:33:20] 2026-03-03 20:32:46,137 | INFO     | 
[2026-03-03 21:33:20] 2026-03-03 20:32:46,142 | INFO     | pilot is running in a VM
[2026-03-03 21:33:20] 2026-03-03 20:32:46,142 | INFO     | architecture information:
[2026-03-03 21:33:20] 2026-03-03 20:32:46,148 | INFO     | executing command: cat /etc/os-release
[2026-03-03 21:33:20] 2026-03-03 20:32:46,478 | INFO     | cat /etc/os-release:
[2026-03-03 21:33:20] NAME="CentOS Linux"
[2026-03-03 21:33:20] VERSION="7 (Core)"
[2026-03-03 21:33:20] ID="centos"
[2026-03-03 21:33:20] ID_LIKE="rhel fedora"
[2026-03-03 21:33:20] VERSION_ID="7"
[2026-03-03 21:33:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 21:33:20] ANSI_COLOR="0;31"
[2026-03-03 21:33:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 21:33:20] HOME_URL="https://www.centos.org/"
[2026-03-03 21:33:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 21:33:20] 
[2026-03-03 21:33:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 21:33:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 21:33:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 21:33:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 21:33:20] 
[2026-03-03 21:33:20] 2026-03-03 20:32:46,478 | INFO     | **************************************
[2026-03-03 21:33:20] 2026-03-03 20:32:46,982 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-03 21:33:20] 2026-03-03 20:32:47,210 | INFO     | sufficient remaining disk space (495703818240 B)
[2026-03-03 21:33:20] 2026-03-03 20:32:47,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 21:33:20] 2026-03-03 20:32:47,211 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 21:33:20] 2026-03-03 20:32:47,211 | INFO     | update_server=False
[2026-03-03 21:33:20] 2026-03-03 20:32:47,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 21:33:20] 2026-03-03 20:32:47,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 21:33:20] 2026-03-03 20:32:47,344 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 21:33:20] 2026-03-03 20:32:47,345 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 21:33:20] 2026-03-03 20:32:47,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:33:20] 2026-03-03 20:32:47,345 | INFO     | will abort loop
[2026-03-03 21:33:20] 2026-03-03 20:32:47,841 | INFO     | all payload control threads have been joined
[2026-03-03 21:33:20] 2026-03-03 20:32:48,003 | INFO     | all job control threads have been joined
[2026-03-03 21:33:20] 2026-03-03 20:32:48,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 21:33:20] 2026-03-03 20:32:48,217 | INFO     | [job] retrieve thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:48,259 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:48,307 | INFO     | all data control threads have been joined
[2026-03-03 21:33:20] 2026-03-03 20:32:48,351 | INFO     | [job] job monitor thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:48,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:33:20] 2026-03-03 20:32:48,847 | INFO     | [payload] control thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:48,922 | INFO     | [job] validate thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:48,972 | INFO     | [data] copytool_in thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:49,009 | INFO     | [job] control thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:49,059 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:49,130 | INFO     | [payload] validate_post thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:49,302 | INFO     | [payload] failed_post thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:49,313 | INFO     | [data] control thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:49,372 | INFO     | [job] queue monitor thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:49,638 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:50,187 | INFO     | [data] copytool_out thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:51,223 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:32:58,161 | INFO     | job.realtimelogging is not enabled
[2026-03-03 21:33:20] 2026-03-03 20:32:59,167 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 21:33:20] 2026-03-03 20:33:07,673 | INFO     | [monitor] cgroup control has ended
[2026-03-03 21:33:20] 2026-03-03 20:33:09,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140645867370304)>', '<ExcThread(monitor, started 140645079447296)>']
[2026-03-03 21:33:20] 2026-03-03 20:33:14,762 | INFO     | all workflow threads have been joined
[2026-03-03 21:33:20] 2026-03-03 20:33:14,763 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 21:33:20] 2026-03-03 20:33:14,763 | INFO     | traces error code: 0
[2026-03-03 21:33:20] 2026-03-03 20:33:14,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 21:33:20] 2026-03-03 20:33:15,951 | INFO     | PID=4652 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-03 21:33:20] 2026-03-03 20:33:15,951 | INFO     | .. there are 2 such processes running
[2026-03-03 21:33:20] 2026-03-03 20:33:15,951 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 21:33:20] 2026-03-03 20:33:15,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 21:33:20] 2026-03-03 20:33:15,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 21:33:20] 2026-03-03 20:33:15,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 21:33:20] 2026-03-03 20:33:15,952 | INFO     | [monitor] control thread has ended
[2026-03-03 21:33:20] 2026-03-03 20:33:16,418 [wrapper] ==== pilot stdout END ====
[2026-03-03 21:33:20] 2026-03-03 20:33:16,534 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 21:33:20] 2026-03-03 20:33:16,639 [wrapper] pilotpid: 4652
[2026-03-03 21:33:20] 2026-03-03 20:33:16,734 [wrapper] Pilot exit status: 0
[2026-03-03 21:33:20] 2026-03-03 20:33:17,287 [wrapper] pandaids: 7034444427
[2026-03-03 21:33:20] 2026-03-03 20:33:18,330 [wrapper] cleanup supervisor_pilot 15532 4653
[2026-03-03 21:33:20] 2026-03-03 20:33:18,426 [wrapper] Test setup, not cleaning
[2026-03-03 21:33:20] 2026-03-03 20:33:18,546 [wrapper] apfmon messages muted
[2026-03-03 21:33:20] 2026-03-03 20:33:18,618 [wrapper] ==== wrapper stdout END ====
[2026-03-03 21:33:20] 2026-03-03 20:33:18,685 [wrapper] ==== wrapper stderr END ====
[2026-03-03 21:33:20]  *** Error codes and diagnostics ***
[2026-03-03 21:33:20]     "exeErrorCode": 0,
[2026-03-03 21:33:20]     "exeErrorDiag": "",
[2026-03-03 21:33:20]     "pilotErrorCode": 0,
[2026-03-03 21:33:20]     "pilotErrorDiag": "",
[2026-03-03 21:33:20]  *** Listing of results directory ***
[2026-03-03 21:33:21] total 468432
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc    584627 Mar  1 06:54 pilot3.tar.gz
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc      5111 Mar  1 06:55 queuedata.json
[2026-03-03 21:33:21] -rwx------. 1 boinc boinc     36322 Mar  1 06:55 runpilot2-wrapper.sh
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc       100 Mar  3 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 21:33:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 16:37 run_atlas
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc       105 Mar  3 16:37 job.xml
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc      6392 Mar  3 16:37 init_data.xml
[2026-03-03 21:33:21] -rw-r--r--. 2 boinc boinc 268907974 Mar  3 16:37 EVNT.48343683._000076.pool.root.1
[2026-03-03 21:33:21] -rw-r--r--. 2 boinc boinc     15845 Mar  3 16:37 start_atlas.sh
[2026-03-03 21:33:21] drwxrwx--x. 2 boinc boinc        68 Mar  3 16:37 shared
[2026-03-03 21:33:21] -rw-r--r--. 2 boinc boinc    597960 Mar  3 16:37 input.tar.gz
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc         0 Mar  3 16:37 boinc_lockfile
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc      2563 Mar  3 16:37 pandaJob.out
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc       415 Mar  3 16:43 workernode_map.json
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc    998508 Mar  3 16:43 agis_schedconf.cvmfs.json
[2026-03-03 21:33:21] drwx------. 5 boinc boinc      4096 Mar  3 16:43 pilot3
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc 200969948 Mar  3 21:31 HITS.48838521._001890.pool.root.1
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc       530 Mar  3 21:31 boinc_task_state.xml
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc      1011 Mar  3 21:32 memory_monitor_summary.json
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc        95 Mar  3 21:32 pilot_heartbeat.json
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc   1516092 Mar  3 21:32 agis_ddmendpoints.agis.ALL.json
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc    512156 Mar  3 21:32 log.48838521._001890.job.log.tgz.1
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc      6316 Mar  3 21:32 heartbeat.json
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc        28 Mar  3 21:33 wrapper_checkpoint.txt
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc      8192 Mar  3 21:33 boinc_mmap_file
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc       819 Mar  3 21:33 pilotlog.txt
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc   2426185 Mar  3 21:33 log.48838521._001890.job.log.1
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc       357 Mar  3 21:33 output.list
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc       620 Mar  3 21:33 runtime_log
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc   2959360 Mar  3 21:33 result.tar.gz
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc      8832 Mar  3 21:33 runtime_log.err
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc       655 Mar  3 21:33 MRlLDmYxoG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdH7KDmrgtC6n.diag
[2026-03-03 21:33:21] -rw-r--r--. 1 boinc boinc     20599 Mar  3 21:33 stderr.txt
[2026-03-03 21:33:21] HITS file was successfully produced:
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc 200969948 Mar  3 21:31 shared/HITS.pool.root.1
[2026-03-03 21:33:21]  *** Contents of shared directory: ***
[2026-03-03 21:33:21] total 462360
[2026-03-03 21:33:21] -rw-r--r--. 2 boinc boinc 268907974 Mar  3 16:37 ATLAS.root_0
[2026-03-03 21:33:21] -rw-r--r--. 2 boinc boinc     15845 Mar  3 16:37 start_atlas.sh
[2026-03-03 21:33:21] -rw-r--r--. 2 boinc boinc    597960 Mar  3 16:37 input.tar.gz
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc 200969948 Mar  3 21:31 HITS.pool.root.1
[2026-03-03 21:33:21] -rw-------. 1 boinc boinc   2959360 Mar  3 21:33 result.tar.gz
21:33:23 (642): run_atlas exited; CPU time 64916.591248
21:33:23 (642): called boinc_finish(0)

</stderr_txt>
]]>

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