Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:20:04 (2910956): wrapper (7.7.26015): starting
11:20:04 (2910956): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 11:20:04] Arguments: --nthreads 4
[2026-03-04 11:20:04] Threads: 4
[2026-03-04 11:20:04] Checking for CVMFS
[2026-03-04 11:20:04] No cvmfs_config command found, will try listing directly
[2026-03-04 11:20:04] CVMFS is ok
[2026-03-04 11:20:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 11:20:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 11:20:04] Further information can be found at the LHC@home message board.
[2026-03-04 11:20:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 11:20:04] Checking for apptainer binary...
[2026-03-04 11:20:04] which: no apptainer in ((null))
[2026-03-04 11:20:04] apptainer is not installed, using version from CVMFS
[2026-03-04 11:20:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 11:20:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-04 11:20:04] apptainer works
[2026-03-04 11:20:04] Set ATHENA_PROC_NUMBER=4
[2026-03-04 11:20:04] Set ATHENA_CORE_NUMBER=4
[2026-03-04 11:20:04] Starting ATLAS job with PandaID=7036175318
[2026-03-04 11:20:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 13:13:44]  *** The last 200 lines of the pilot log: ***
[2026-03-04 13:13:44] 2026-03-04 12:12:49,023 | INFO     | total number of processed events: 400 (read)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,042 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7036175318/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,042 | INFO     | extracted standard info from prmon json
[2026-03-04 13:13:44] 2026-03-04 12:12:49,042 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 13:13:44] 2026-03-04 12:12:49,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 13:13:44] 2026-03-04 12:12:49,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 13:13:44] 2026-03-04 12:12:49,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 13:13:44] 2026-03-04 12:12:49,044 | INFO     | fitting pss+swap vs Time
[2026-03-04 13:13:44] 2026-03-04 12:12:49,044 | INFO     | sum of square deviations: 424045160.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,044 | INFO     | sum of deviations: 1352104711.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,044 | INFO     | mean x: 1772622996.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,044 | INFO     | mean y: 2288277.891891892
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | intersect: -5649873637.406314
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | chi2: 1.9316924118795273
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | sum of square deviations: 369281342.5
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | sum of deviations: 8112041171.500001
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | mean x: 1772622843.5
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | mean y: 2306391.952830189
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | intersect: -38937081638.498245
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | chi2: 1.1057287901249186
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | current chi2=1.1057287901249186 (change=42.75854772090501 %)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,045 | INFO     | sum of square deviations: 319447850.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | sum of deviations: 7735809488.999999
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | mean x: 1772622691.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | mean y: 2305239.5643564356
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | intersect: -42923860747.94977
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | chi2: 1.1077062206943786
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | current chi2=1.1077062206943786 (change=-0.1788350441012378 %)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | right removable region: 100
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | sum of square deviations: 369281342.5
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | sum of deviations: -8469389236.500001
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | mean x: 1772623148.5
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | mean y: 2314755.103773585
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | intersect: 40657050552.584915
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | chi2: 0.8596829355430949
[2026-03-04 13:13:44] 2026-03-04 12:12:49,046 | INFO     | current chi2=0.8596829355430949 (change=55.495868273012086 %)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | sum of square deviations: 319447850.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | sum of deviations: -7795160903.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | mean x: 1772623301.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | mean y: 2312691.9306930695
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | intersect: 43257835781.85602
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | chi2: 0.860883280781584
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | current chi2=0.860883280781584 (change=-0.1396265051755162 %)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | left removable region: 20
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | sum of square deviations: 158737860.0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | sum of deviations: -937467977.5
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | mean x: 1772623270.5
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | mean y: 2333170.8125
[2026-03-04 13:13:44] 2026-03-04 12:12:49,047 | INFO     | intersect: 10471023830.149035
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | chi2: 0.0009050596528493384
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | current memory leak: -5.91 B/s (using 80 data points, chi2=0.00)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | could have reported an average CPU frequency of 3548 MHz (7 samples)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | ..............................
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . Timing measurements:
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . get job = 0 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . initial setup = 5 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . payload setup = 5 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . stage-in = 0 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . payload execution = 6727 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . stage-out = 0 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | . log creation = 0 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,048 | INFO     | ..............................
[2026-03-04 13:13:44] 2026-03-04 12:12:49,097 | INFO     | 
[2026-03-04 13:13:44] 2026-03-04 12:12:49,097 | INFO     | job summary report
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | --------------------------------------------------
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | PanDA job id: 7036175318
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | task id: 48851500
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | errors: (none)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | pilot state: finished 
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | transexitcode: 0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | exeerrorcode: 0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | exeerrordiag: 
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | exitcode: 0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | exitmsg: OK
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | cpuconsumptiontime: 25988 s
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | nevents: 400
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | neventsw: 0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | pid: 2943649
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | pgrp: 2943649
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | corecount: 4
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | event service: False
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | sizes: {0: 2287161, 11: 2287161, 6736: 2314390, 6737: 2323467, 6739: 2323661}
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | --------------------------------------------------
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | 
[2026-03-04 13:13:44] 2026-03-04 12:12:49,098 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-04 13:13:44] 2026-03-04 12:12:49,119 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,119 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,119 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | job 7036175318 has completed (purged errors)
[2026-03-04 13:13:44] 2026-03-04 12:12:49,120 | INFO     | overall cleanup function is called
[2026-03-04 13:13:44] 2026-03-04 12:12:50,127 | INFO     | --- collectZombieJob: --- 10, [2943649]
[2026-03-04 13:13:44] 2026-03-04 12:12:50,127 | INFO     | zombie collector waiting for pid 2943649
[2026-03-04 13:13:44] 2026-03-04 12:12:50,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 13:13:44] 2026-03-04 12:12:50,127 | INFO     | collected zombie processes
[2026-03-04 13:13:44] 2026-03-04 12:12:50,127 | INFO     | will attempt to kill all subprocesses of pid=2943649
[2026-03-04 13:13:44] 2026-03-04 12:12:50,626 | INFO     | process IDs to be killed: [2943649] (in reverse order)
[2026-03-04 13:13:44] 2026-03-04 12:12:50,858 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 13:13:44] 2026-03-04 12:12:50,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 13:13:44] 2026-03-04 12:12:50,893 | INFO     | did not find any defunct processes belonging to 2943649
[2026-03-04 13:13:44] 2026-03-04 12:12:50,926 | INFO     | did not find any defunct processes belonging to 2943649
[2026-03-04 13:13:44] 2026-03-04 12:12:50,927 | INFO     | ready for new job
[2026-03-04 13:13:44] 2026-03-04 12:12:50,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 13:13:44] 2026-03-04 12:12:50,928 | INFO     | **************************************
[2026-03-04 13:13:44] 2026-03-04 12:12:50,928 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 13:13:44] 2026-03-04 12:12:50,928 | INFO     | **************************************
[2026-03-04 13:13:44] 2026-03-04 12:12:50,928 | INFO     | 
[2026-03-04 13:13:44] 2026-03-04 12:12:50,935 | INFO     | architecture information:
[2026-03-04 13:13:44] 2026-03-04 12:12:50,935 | INFO     | executing command: cat /etc/os-release
[2026-03-04 13:13:44] 2026-03-04 12:12:50,949 | INFO     | cat /etc/os-release:
[2026-03-04 13:13:44] NAME="CentOS Linux"
[2026-03-04 13:13:44] VERSION="7 (Core)"
[2026-03-04 13:13:44] ID="centos"
[2026-03-04 13:13:44] ID_LIKE="rhel fedora"
[2026-03-04 13:13:44] VERSION_ID="7"
[2026-03-04 13:13:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 13:13:44] ANSI_COLOR="0;31"
[2026-03-04 13:13:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 13:13:44] HOME_URL="https://www.centos.org/"
[2026-03-04 13:13:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 13:13:44] 
[2026-03-04 13:13:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 13:13:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 13:13:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 13:13:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 13:13:44] 
[2026-03-04 13:13:44] 2026-03-04 12:12:50,950 | INFO     | **************************************
[2026-03-04 13:13:44] 2026-03-04 12:12:51,453 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-04 13:13:44] 2026-03-04 12:12:51,467 | INFO     | sufficient remaining disk space (22342008832 B)
[2026-03-04 13:13:44] 2026-03-04 12:12:51,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 13:13:44] 2026-03-04 12:12:51,467 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 13:13:44] 2026-03-04 12:12:51,468 | INFO     | update_server=False
[2026-03-04 13:13:44] 2026-03-04 12:12:51,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 13:13:44] 2026-03-04 12:12:51,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 13:13:44] 2026-03-04 12:12:51,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 13:13:44] 2026-03-04 12:12:51,751 | INFO     | all job control threads have been joined
[2026-03-04 13:13:44] 2026-03-04 12:12:51,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 13:13:44] 2026-03-04 12:12:51,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 13:13:44] 2026-03-04 12:12:51,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:13:44] 2026-03-04 12:12:51,840 | INFO     | will abort loop
[2026-03-04 13:13:44] 2026-03-04 12:12:52,473 | INFO     | [job] retrieve thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:52,547 | INFO     | all data control threads have been joined
[2026-03-04 13:13:44] 2026-03-04 12:12:52,576 | INFO     | [payload] failed_post thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:52,669 | INFO     | all payload control threads have been joined
[2026-03-04 13:13:44] 2026-03-04 12:12:52,699 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:52,703 | INFO     | [job] validate thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:52,736 | INFO     | [payload] validate_post thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:52,756 | INFO     | [job] control thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:52,845 | INFO     | [job] job monitor thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:52,944 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:53,204 | INFO     | [data] copytool_in thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:53,480 | INFO     | [data] copytool_out thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:53,552 | INFO     | [data] control thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:53,674 | INFO     | [payload] control thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:53,790 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:54,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:13:44] 2026-03-04 12:12:55,112 | INFO     | [job] queue monitor thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:12:55,475 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:13:02,340 | INFO     | job.realtimelogging is not enabled
[2026-03-04 13:13:44] 2026-03-04 12:13:03,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 13:13:44] 2026-03-04 12:13:21,399 | INFO     | PID=2922069 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 13:13:44] 2026-03-04 12:13:21,399 | INFO     | .. there are 39 such processes running
[2026-03-04 13:13:44] 2026-03-04 12:13:21,399 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 13:13:44] 2026-03-04 12:13:21,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 13:13:44] 2026-03-04 12:13:21,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 13:13:44] 2026-03-04 12:13:29,803 | INFO     | [monitor] cgroup control has ended
[2026-03-04 13:13:44] 2026-03-04 12:13:30,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22747223734080)>', '<ExcThread(monitor, started 22746984888064)>']
[2026-03-04 13:13:44] 2026-03-04 12:13:31,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 13:13:44] 2026-03-04 12:13:31,449 | INFO     | [monitor] control thread has ended
[2026-03-04 13:13:44] 2026-03-04 12:13:35,729 | INFO     | all workflow threads have been joined
[2026-03-04 13:13:44] 2026-03-04 12:13:35,729 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 13:13:44] 2026-03-04 12:13:35,729 | INFO     | traces error code: 0
[2026-03-04 13:13:44] 2026-03-04 12:13:35,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 13:13:44] 2026-03-04 12:13:35,917 [wrapper] ==== pilot stdout END ====
[2026-03-04 13:13:44] 2026-03-04 12:13:35,919 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 13:13:44] 2026-03-04 12:13:35,922 [wrapper] pilotpid: 2922069
[2026-03-04 13:13:44] 2026-03-04 12:13:35,924 [wrapper] Pilot exit status: 0
[2026-03-04 13:13:44] 2026-03-04 12:13:35,933 [wrapper] pandaids: 7036175318
[2026-03-04 13:13:44] 2026-03-04 12:13:36,080 [wrapper] cleanup supervisor_pilot 3647747 2922070
[2026-03-04 13:13:44] 2026-03-04 12:13:36,085 [wrapper] Test setup, not cleaning
[2026-03-04 13:13:44] 2026-03-04 12:13:36,091 [wrapper] apfmon messages muted
[2026-03-04 13:13:44] 2026-03-04 12:13:36,094 [wrapper] ==== wrapper stdout END ====
[2026-03-04 13:13:44] 2026-03-04 12:13:36,096 [wrapper] ==== wrapper stderr END ====
[2026-03-04 13:13:44]  *** Error codes and diagnostics ***
[2026-03-04 13:13:44]     "exeErrorCode": 0,
[2026-03-04 13:13:44]     "exeErrorDiag": "",
[2026-03-04 13:13:44]     "pilotErrorCode": 0,
[2026-03-04 13:13:44]     "pilotErrorDiag": "",
[2026-03-04 13:13:44]  *** Listing of results directory ***
[2026-03-04 13:13:44] total 361984
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc    584627 Mar  3 01:05 pilot3.tar.gz
[2026-03-04 13:13:44] -rwx------. 1 boinc boinc     36322 Mar  3 01:07 runpilot2-wrapper.sh
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc      5111 Mar  3 01:08 queuedata.json
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc       100 Mar  4 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 13:13:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 11:19 run_atlas
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc       105 Mar  4 11:19 job.xml
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc      6708 Mar  4 11:20 init_data.xml
[2026-03-04 13:13:44] -rw-r--r--. 2 boinc boinc 213978255 Mar  4 11:20 EVNT.48460208._000001.pool.root.1
[2026-03-04 13:13:44] -rw-r--r--. 2 boinc boinc     15845 Mar  4 11:20 start_atlas.sh
[2026-03-04 13:13:44] drwxrwx--x. 2 boinc boinc      4096 Mar  4 11:20 shared
[2026-03-04 13:13:44] -rw-r--r--. 2 boinc boinc    597968 Mar  4 11:20 input.tar.gz
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc         0 Mar  4 11:20 boinc_lockfile
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc      2619 Mar  4 11:20 pandaJob.out
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc    997376 Mar  4 11:20 agis_schedconf.cvmfs.json
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc   1516092 Mar  4 11:20 agis_ddmendpoints.agis.ALL.json
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc       444 Mar  4 11:20 workernode_map.json
[2026-03-04 13:13:44] drwx------. 5 boinc boinc      4096 Mar  4 11:20 pilot3
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc 150224224 Mar  4 13:12 HITS.48851500._000018.pool.root.1
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc       528 Mar  4 13:12 boinc_task_state.xml
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc      1032 Mar  4 13:12 memory_monitor_summary.json
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc        95 Mar  4 13:12 pilot_heartbeat.json
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc    302356 Mar  4 13:12 log.48851500._000018.job.log.tgz.1
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc      6346 Mar  4 13:12 heartbeat.json
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc        27 Mar  4 13:13 wrapper_checkpoint.txt
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc      5088 Mar  4 13:13 pilotlog.txt
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc    966148 Mar  4 13:13 log.48851500._000018.job.log.1
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc       357 Mar  4 13:13 output.list
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc       620 Mar  4 13:13 runtime_log
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc   1290240 Mar  4 13:13 result.tar.gz
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc      9221 Mar  4 13:13 runtime_log.err
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc       663 Mar  4 13:13 m8LNDmKTSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVGDLDmEoTMDn.diag
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc      8192 Mar  4 13:13 boinc_mmap_file
[2026-03-04 13:13:44] -rw-r--r--. 1 boinc boinc     20783 Mar  4 13:13 stderr.txt
[2026-03-04 13:13:44] HITS file was successfully produced:
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc 150224224 Mar  4 13:12 shared/HITS.pool.root.1
[2026-03-04 13:13:44]  *** Contents of shared directory: ***
[2026-03-04 13:13:44] total 357536
[2026-03-04 13:13:44] -rw-r--r--. 2 boinc boinc 213978255 Mar  4 11:20 ATLAS.root_0
[2026-03-04 13:13:44] -rw-r--r--. 2 boinc boinc     15845 Mar  4 11:20 start_atlas.sh
[2026-03-04 13:13:44] -rw-r--r--. 2 boinc boinc    597968 Mar  4 11:20 input.tar.gz
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc 150224224 Mar  4 13:12 HITS.pool.root.1
[2026-03-04 13:13:44] -rw-------. 1 boinc boinc   1290240 Mar  4 13:13 result.tar.gz
13:13:45 (2910956): run_atlas exited; CPU time 26333.622270
13:13:45 (2910956): called boinc_finish(0)

</stderr_txt>
]]>

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