Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:13:03 (10467): wrapper (7.7.26015): starting
17:13:03 (10467): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 17:13:03] Arguments: --nthreads 8
[2026-03-03 17:13:03] Threads: 8
[2026-03-03 17:13:03] Checking for CVMFS
[2026-03-03 17:13:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 17:13:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 17:13:05] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 17:13:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 17:13:06] 2.11.2.0 9669 111961 103176 156849 1 54 14519277 25165825 899 130560 151 35464500 99.826 31022963 1057 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 17:13:06] CVMFS is ok
[2026-03-03 17:13:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 17:13:06] Checking for apptainer binary...
[2026-03-03 17:13:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 17:13:06] Running /usr/bin/apptainer --version
[2026-03-03 17:13:06] apptainer version 1.3.2-1.el7
[2026-03-03 17:13:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 17:13:11] cg-vwn394.simple-grid.lan
[2026-03-03 17:13:11] apptainer works
[2026-03-03 17:13:11] Set ATHENA_PROC_NUMBER=8
[2026-03-03 17:13:11] Set ATHENA_CORE_NUMBER=8
[2026-03-03 17:13:11] Starting ATLAS job with PandaID=7035730539
[2026-03-03 17:13:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 00:36:14]  *** The last 200 lines of the pilot log: ***
[2026-03-04 00:36:14] 2026-03-03 23:35:03,362 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7035730539/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,363 | INFO     | extracted standard info from prmon json
[2026-03-04 00:36:14] 2026-03-03 23:35:03,363 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 00:36:14] 2026-03-03 23:35:03,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 00:36:14] 2026-03-03 23:35:03,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 00:36:14] 2026-03-03 23:35:03,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 00:36:14] 2026-03-03 23:35:03,372 | INFO     | fitting pss+swap vs Time
[2026-03-04 00:36:14] 2026-03-03 23:35:03,373 | INFO     | sum of square deviations: 23635978050.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,389 | INFO     | sum of deviations: 179741830424.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,390 | INFO     | mean x: 1772567953.5
[2026-03-04 00:36:14] 2026-03-03 23:35:03,390 | INFO     | mean y: 2443850.8018867923
[2026-03-04 00:36:14] 2026-03-03 23:35:03,390 | INFO     | intersect: -13477201791.067953
[2026-03-04 00:36:14] 2026-03-03 23:35:03,391 | INFO     | chi2: 8.856451855003176
[2026-03-04 00:36:14] 2026-03-03 23:35:03,391 | INFO     | sum of square deviations: 22809618370.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,397 | INFO     | sum of deviations: 205276015867.99997
[2026-03-04 00:36:14] 2026-03-03 23:35:03,397 | INFO     | mean x: 1772567801.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,398 | INFO     | mean y: 2448513.46300716
[2026-03-04 00:36:14] 2026-03-03 23:35:03,398 | INFO     | intersect: -15949841881.879622
[2026-03-04 00:36:14] 2026-03-03 23:35:03,398 | INFO     | chi2: 8.12800228419541
[2026-03-04 00:36:14] 2026-03-03 23:35:03,399 | INFO     | current chi2=8.12800228419541 (change=8.225072328443249 %)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,399 | INFO     | right removable region: 418
[2026-03-04 00:36:14] 2026-03-03 23:35:03,399 | INFO     | sum of square deviations: 22809618370.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,410 | INFO     | sum of deviations: 30891671057.00003
[2026-03-04 00:36:14] 2026-03-03 23:35:03,411 | INFO     | mean x: 1772568106.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,411 | INFO     | mean y: 2471310.105011933
[2026-03-04 00:36:14] 2026-03-03 23:35:03,411 | INFO     | intersect: -2398164683.3801155
[2026-03-04 00:36:14] 2026-03-03 23:35:03,411 | INFO     | chi2: 3.9734236914060395
[2026-03-04 00:36:14] 2026-03-03 23:35:03,412 | INFO     | current chi2=3.9734236914060395 (change=55.13526459062296 %)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,412 | INFO     | sum of square deviations: 22002747427.5
[2026-03-04 00:36:14] 2026-03-03 23:35:03,418 | INFO     | sum of deviations: -83146025111.99998
[2026-03-04 00:36:14] 2026-03-03 23:35:03,418 | INFO     | mean x: 1772568258.5
[2026-03-04 00:36:14] 2026-03-03 23:35:03,418 | INFO     | mean y: 2492848.342995169
[2026-03-04 00:36:14] 2026-03-03 23:35:03,418 | INFO     | intersect: 6700838380.854567
[2026-03-04 00:36:14] 2026-03-03 23:35:03,419 | INFO     | chi2: 1.2213419123507472
[2026-03-04 00:36:14] 2026-03-03 23:35:03,419 | INFO     | current chi2=1.2213419123507472 (change=69.26222806310993 %)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,420 | INFO     | sum of square deviations: 21215132660.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,425 | INFO     | sum of deviations: -104114253257.00002
[2026-03-04 00:36:14] 2026-03-03 23:35:03,426 | INFO     | mean x: 1772568411.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,426 | INFO     | mean y: 2496887.139364303
[2026-03-04 00:36:14] 2026-03-03 23:35:03,426 | INFO     | intersect: 8701459057.956734
[2026-03-04 00:36:14] 2026-03-03 23:35:03,427 | INFO     | chi2: 1.0527469911568161
[2026-03-04 00:36:14] 2026-03-03 23:35:03,427 | INFO     | current chi2=1.0527469911568161 (change=13.804072347720567 %)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,427 | INFO     | left removable region: 30
[2026-03-04 00:36:14] 2026-03-03 23:35:03,428 | INFO     | sum of square deviations: 18112179597.0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,436 | INFO     | sum of deviations: -41306059140.49995
[2026-03-04 00:36:14] 2026-03-03 23:35:03,437 | INFO     | mean x: 1772568685.5
[2026-03-04 00:36:14] 2026-03-03 23:35:03,437 | INFO     | mean y: 2495079.93556701
[2026-03-04 00:36:14] 2026-03-03 23:35:03,437 | INFO     | intersect: 4044958691.879247
[2026-03-04 00:36:14] 2026-03-03 23:35:03,437 | INFO     | chi2: 0.1975101345838429
[2026-03-04 00:36:14] 2026-03-03 23:35:03,438 | INFO     | current memory leak: -2.28 B/s (using 388 data points, chi2=0.20)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,438 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | ..............................
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | . Timing measurements:
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | . get job = 0 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | . initial setup = 111 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | . payload setup = 145 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | . stage-in = 0 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | . payload execution = 25986 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,439 | INFO     | . stage-out = 3 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,440 | INFO     | . log creation = 1 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,440 | INFO     | ..............................
[2026-03-04 00:36:14] 2026-03-03 23:35:03,590 | INFO     | 
[2026-03-04 00:36:14] 2026-03-03 23:35:03,590 | INFO     | job summary report
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | --------------------------------------------------
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | PanDA job id: 7035730539
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | task id: 48844731
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | errors: (none)
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | pilot state: finished 
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | transexitcode: 0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | exeerrorcode: 0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | exeerrordiag: 
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | exitcode: 0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,591 | INFO     | exitmsg: OK
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | cpuconsumptiontime: 100115 s
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | nevents: 400
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | neventsw: 0
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | pid: 18898
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | pgrp: 18898
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | corecount: 8
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | event service: False
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | sizes: {0: 2286045, 1: 2286731, 2: 2287192, 26136: 2323366, 26137: 2323365, 26142: 2332605, 26143: 2332743}
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | --------------------------------------------------
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | 
[2026-03-04 00:36:14] 2026-03-03 23:35:03,592 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-04 00:36:14] 2026-03-03 23:35:04,073 | INFO     | time since job start (26146s) is within the limit (349056.0s)
[2026-03-04 00:36:14] 2026-03-03 23:35:04,210 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,210 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,210 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,210 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,212 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 00:36:14] 2026-03-03 23:35:04,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,212 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 00:36:14] 2026-03-03 23:35:04,212 | INFO     | job 7035730539 has completed (purged errors)
[2026-03-04 00:36:14] 2026-03-03 23:35:04,212 | INFO     | overall cleanup function is called
[2026-03-04 00:36:14] 2026-03-03 23:35:05,191 | INFO     | PID=14444 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 00:36:14] 2026-03-03 23:35:05,192 | INFO     | .. there are 2 such processes running
[2026-03-04 00:36:14] 2026-03-03 23:35:05,221 | INFO     | --- collectZombieJob: --- 10, [18898]
[2026-03-04 00:36:14] 2026-03-03 23:35:05,221 | INFO     | zombie collector waiting for pid 18898
[2026-03-04 00:36:14] 2026-03-03 23:35:05,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 00:36:14] 2026-03-03 23:35:05,222 | INFO     | collected zombie processes
[2026-03-04 00:36:14] 2026-03-03 23:35:05,222 | INFO     | will attempt to kill all subprocesses of pid=18898
[2026-03-04 00:36:14] 2026-03-03 23:35:05,330 | INFO     | process IDs to be killed: [18898] (in reverse order)
[2026-03-04 00:36:14] 2026-03-03 23:35:06,322 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 00:36:14] 2026-03-03 23:35:06,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 00:36:14] 2026-03-03 23:35:06,324 | INFO     | did not find any defunct processes belonging to 18898
[2026-03-04 00:36:14] 2026-03-03 23:35:06,326 | INFO     | did not find any defunct processes belonging to 18898
[2026-03-04 00:36:14] 2026-03-03 23:35:06,326 | INFO     | ready for new job
[2026-03-04 00:36:14] 2026-03-03 23:35:06,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 00:36:14] 2026-03-03 23:35:06,329 | INFO     | **************************************
[2026-03-04 00:36:14] 2026-03-03 23:35:06,329 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 00:36:14] 2026-03-03 23:35:06,329 | INFO     | **************************************
[2026-03-04 00:36:14] 2026-03-03 23:35:06,329 | INFO     | 
[2026-03-04 00:36:14] 2026-03-03 23:35:06,330 | INFO     | pilot is running in a VM
[2026-03-04 00:36:14] 2026-03-03 23:35:06,330 | INFO     | architecture information:
[2026-03-04 00:36:14] 2026-03-03 23:35:06,338 | INFO     | executing command: cat /etc/os-release
[2026-03-04 00:36:14] 2026-03-03 23:35:06,652 | INFO     | cat /etc/os-release:
[2026-03-04 00:36:14] NAME="CentOS Linux"
[2026-03-04 00:36:14] VERSION="7 (Core)"
[2026-03-04 00:36:14] ID="centos"
[2026-03-04 00:36:14] ID_LIKE="rhel fedora"
[2026-03-04 00:36:14] VERSION_ID="7"
[2026-03-04 00:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 00:36:14] ANSI_COLOR="0;31"
[2026-03-04 00:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 00:36:14] HOME_URL="https://www.centos.org/"
[2026-03-04 00:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 00:36:14] 
[2026-03-04 00:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 00:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 00:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 00:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 00:36:14] 
[2026-03-04 00:36:14] 2026-03-03 23:35:06,652 | INFO     | **************************************
[2026-03-04 00:36:14] 2026-03-03 23:35:07,155 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-04 00:36:14] 2026-03-03 23:35:07,426 | INFO     | sufficient remaining disk space (495976448000 B)
[2026-03-04 00:36:14] 2026-03-03 23:35:07,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 00:36:14] 2026-03-03 23:35:07,426 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 00:36:14] 2026-03-03 23:35:07,427 | INFO     | update_server=False
[2026-03-04 00:36:14] 2026-03-03 23:35:07,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 00:36:14] 2026-03-03 23:35:07,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 00:36:14] 2026-03-03 23:35:07,927 | INFO     | aborting loop
[2026-03-04 00:36:14] 2026-03-03 23:35:07,956 | INFO     | all job control threads have been joined
[2026-03-04 00:36:14] 2026-03-03 23:35:08,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 00:36:14] 2026-03-03 23:35:08,289 | INFO     | all data control threads have been joined
[2026-03-04 00:36:14] 2026-03-03 23:35:08,432 | INFO     | [job] retrieve thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:08,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 00:36:14] 2026-03-03 23:35:08,626 | INFO     | all payload control threads have been joined
[2026-03-04 00:36:14] 2026-03-03 23:35:08,711 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:08,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 00:36:14] 2026-03-03 23:35:08,908 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:08,933 | INFO     | [job] job monitor thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:08,962 | INFO     | [job] control thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,040 | INFO     | [job] validate thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,295 | INFO     | [data] control thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,614 | INFO     | [job] queue monitor thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,632 | INFO     | [payload] control thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,640 | INFO     | [data] copytool_in thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,734 | INFO     | [payload] validate_post thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,792 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,873 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:09,998 | INFO     | [payload] failed_post thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:10,144 | INFO     | [data] copytool_out thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:12,769 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 00:36:14] 2026-03-03 23:35:37,406 | INFO     | PID=14444 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 00:36:14] 2026-03-03 23:35:37,406 | INFO     | .. there are 2 such processes running
[2026-03-04 00:36:14] 2026-03-03 23:35:37,408 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 00:36:14] 2026-03-03 23:35:37,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 00:36:14] 2026-03-03 23:35:37,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 00:36:14] 2026-03-03 23:36:03,065 | INFO     | [monitor] cgroup control has ended
[2026-03-04 00:36:14] 2026-03-03 23:36:04,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826184755008)>', '<ExcThread(monitor, started 139825470498560)>']
[2026-03-04 00:36:14] 2026-03-03 23:36:04,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 00:36:14] 2026-03-03 23:36:04,569 | INFO     | [monitor] control thread has ended
[2026-03-04 00:36:14] 2026-03-03 23:36:09,529 | INFO     | all workflow threads have been joined
[2026-03-04 00:36:14] 2026-03-03 23:36:09,529 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 00:36:14] 2026-03-03 23:36:09,530 | INFO     | traces error code: 0
[2026-03-04 00:36:14] 2026-03-03 23:36:09,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 00:36:14] 2026-03-03 23:36:09,953 [wrapper] ==== pilot stdout END ====
[2026-03-04 00:36:14] 2026-03-03 23:36:10,014 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 00:36:14] 2026-03-03 23:36:10,110 [wrapper] pilotpid: 14444
[2026-03-04 00:36:14] 2026-03-03 23:36:10,211 [wrapper] Pilot exit status: 0
[2026-03-04 00:36:14] 2026-03-03 23:36:10,742 [wrapper] pandaids: 7035730539
[2026-03-04 00:36:14] 2026-03-03 23:36:11,464 [wrapper] cleanup supervisor_pilot 26152 14445
[2026-03-04 00:36:14] 2026-03-03 23:36:11,517 [wrapper] Test setup, not cleaning
[2026-03-04 00:36:14] 2026-03-03 23:36:11,609 [wrapper] apfmon messages muted
[2026-03-04 00:36:14] 2026-03-03 23:36:11,715 [wrapper] ==== wrapper stdout END ====
[2026-03-04 00:36:14] 2026-03-03 23:36:11,821 [wrapper] ==== wrapper stderr END ====
[2026-03-04 00:36:14]  *** Error codes and diagnostics ***
[2026-03-04 00:36:14]     "exeErrorCode": 0,
[2026-03-04 00:36:14]     "exeErrorDiag": "",
[2026-03-04 00:36:14]     "pilotErrorCode": 0,
[2026-03-04 00:36:14]     "pilotErrorDiag": "",
[2026-03-04 00:36:14]  *** Listing of results directory ***
[2026-03-04 00:36:14] total 356612
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc    584627 Mar  2 01:56 pilot3.tar.gz
[2026-03-04 00:36:14] -rwx------. 1 boinc boinc     36322 Mar  2 02:01 runpilot2-wrapper.sh
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc      5111 Mar  2 02:01 queuedata.json
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc       100 Mar  3 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 00:36:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 17:13 run_atlas
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc       105 Mar  3 17:13 job.xml
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc      6391 Mar  3 17:13 init_data.xml
[2026-03-04 00:36:14] -rw-r--r--. 2 boinc boinc 198465066 Mar  3 17:13 EVNT.48454045._000002.pool.root.1
[2026-03-04 00:36:14] -rw-r--r--. 2 boinc boinc     15845 Mar  3 17:13 start_atlas.sh
[2026-03-04 00:36:14] drwxrwx--x. 2 boinc boinc        68 Mar  3 17:13 shared
[2026-03-04 00:36:14] -rw-r--r--. 2 boinc boinc    597958 Mar  3 17:13 input.tar.gz
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc         0 Mar  3 17:13 boinc_lockfile
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc      2604 Mar  3 17:13 pandaJob.out
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc       415 Mar  3 17:19 workernode_map.json
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc    998516 Mar  3 17:19 agis_schedconf.cvmfs.json
[2026-03-04 00:36:14] drwx------. 5 boinc boinc      4096 Mar  3 17:19 pilot3
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc 154241780 Mar  4 00:33 HITS.48844731._000043.pool.root.1
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc       532 Mar  4 00:33 boinc_task_state.xml
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc      1014 Mar  4 00:34 memory_monitor_summary.json
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc   1516092 Mar  4 00:34 agis_ddmendpoints.agis.ALL.json
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc    632830 Mar  4 00:35 log.48844731._000043.job.log.tgz.1
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc      6311 Mar  4 00:35 heartbeat.json
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc        95 Mar  4 00:35 pilot_heartbeat.json
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc      8192 Mar  4 00:35 boinc_mmap_file
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc        29 Mar  4 00:35 wrapper_checkpoint.txt
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc      4881 Mar  4 00:36 pilotlog.txt
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc   3640471 Mar  4 00:36 log.48844731._000043.job.log.1
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc       357 Mar  4 00:36 output.list
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc       620 Mar  4 00:36 runtime_log
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc   4290560 Mar  4 00:36 result.tar.gz
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc      8832 Mar  4 00:36 runtime_log.err
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc       657 Mar  4 00:36 8BmKDmvp6G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiFALDmqQR4Oo.diag
[2026-03-04 00:36:14] -rw-r--r--. 1 boinc boinc     20829 Mar  4 00:36 stderr.txt
[2026-03-04 00:36:14] HITS file was successfully produced:
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc 154241780 Mar  4 00:33 shared/HITS.pool.root.1
[2026-03-04 00:36:14]  *** Contents of shared directory: ***
[2026-03-04 00:36:14] total 349236
[2026-03-04 00:36:14] -rw-r--r--. 2 boinc boinc 198465066 Mar  3 17:13 ATLAS.root_0
[2026-03-04 00:36:14] -rw-r--r--. 2 boinc boinc     15845 Mar  3 17:13 start_atlas.sh
[2026-03-04 00:36:14] -rw-r--r--. 2 boinc boinc    597958 Mar  3 17:13 input.tar.gz
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc 154241780 Mar  4 00:33 HITS.pool.root.1
[2026-03-04 00:36:14] -rw-------. 1 boinc boinc   4290560 Mar  4 00:36 result.tar.gz
00:36:16 (10467): run_atlas exited; CPU time 100396.437349
00:36:16 (10467): called boinc_finish(0)

</stderr_txt>
]]>

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