Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:39:50 (906066): wrapper (7.7.26015): starting
23:39:50 (906066): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 23:39:50] Arguments: --nthreads 4
[2026-03-03 23:39:50] Threads: 4
[2026-03-03 23:39:50] Checking for CVMFS
[2026-03-03 23:39:50] No cvmfs_config command found, will try listing directly
[2026-03-03 23:39:50] CVMFS is ok
[2026-03-03 23:39:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 23:39:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 23:39:50] Further information can be found at the LHC@home message board.
[2026-03-03 23:39:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 23:39:50] Checking for apptainer binary...
[2026-03-03 23:39:50] which: no apptainer in ((null))
[2026-03-03 23:39:50] apptainer is not installed, using version from CVMFS
[2026-03-03 23:39:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 23:39:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot152/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-03 23:39:50] apptainer works
[2026-03-03 23:39:50] Set ATHENA_PROC_NUMBER=4
[2026-03-03 23:39:50] Set ATHENA_CORE_NUMBER=4
[2026-03-03 23:39:50] Starting ATLAS job with PandaID=7036160513
[2026-03-03 23:39:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot152/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 01:21:19]  *** The last 200 lines of the pilot log: ***
[2026-03-04 01:21:19]  is_tar=False
[2026-03-04 01:21:19]  lfn=log.48852130._000014.job.log.tgz.1
[2026-03-04 01:21:19]  mtime=0
[2026-03-04 01:21:19]  protocol_id=None
[2026-03-04 01:21:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 01:21:19]  replicas=None
[2026-03-04 01:21:19]  scope=mc23_13p6TeV
[2026-03-04 01:21:19]  status=None
[2026-03-04 01:21:19]  status_code=0
[2026-03-04 01:21:19]  storage_token=
[2026-03-04 01:21:19]  surl=/var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7036160513/log.48852130._000014.job.log.tgz.1
[2026-03-04 01:21:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/c1/log.48852130._000014.job.log.tgz.1
[2026-03-04 01:21:19]  workdir=None
[2026-03-04 01:21:19] ]
[2026-03-04 01:21:19] 2026-03-04 00:20:35,030 | INFO     | transferring file log.48852130._000014.job.log.tgz.1 from /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7036160513/log.48852130._000014.job.log.tgz.1 to /var/lib/
[2026-03-04 01:21:19] 2026-03-04 00:20:35,030 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7036160513/log.48852130._000014.job.log.tgz.1 /var/lib/boinc/var/slot152/slots/0/
[2026-03-04 01:21:19] 2026-03-04 00:20:35,089 | INFO     | adding to output.list: log.48852130._000014.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/c1/log.48852130._000014.job.log.tg
[2026-03-04 01:21:19] 2026-03-04 00:20:35,090 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 01:21:19] 2026-03-04 00:20:35,090 | INFO     | summary of transferred files:
[2026-03-04 01:21:19] 2026-03-04 00:20:35,090 | INFO     |  -- lfn=log.48852130._000014.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 01:21:19] 2026-03-04 00:20:35,090 | INFO     | stage-out finished correctly
[2026-03-04 01:21:19] 2026-03-04 00:20:35,183 | WARNING  | process 924175 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 01:21:19] 2026-03-04 00:20:35,184 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7036160513/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 01:21:19] 2026-03-04 00:20:35,372 | INFO     | time since job start (6033s) is within the limit (349056.0s)
[2026-03-04 01:21:19] 2026-03-04 00:20:35,685 | INFO     | number of running child processes to parent process 924175: 1
[2026-03-04 01:21:19] 2026-03-04 00:20:35,686 | INFO     | maximum number of monitored processes: 6
[2026-03-04 01:21:19] 2026-03-04 00:20:36,181 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 01:21:19] 2026-03-04 00:20:36,235 | INFO     | job 7036160513 has state=finished
[2026-03-04 01:21:19] 2026-03-04 00:20:36,235 | INFO     | preparing for final server update for job 7036160513 in state='finished'
[2026-03-04 01:21:19] 2026-03-04 00:20:36,236 | INFO     | reading metadata from: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7036160513/jobReport.json
[2026-03-04 01:21:19] 2026-03-04 00:20:36,237 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot152/slots/0/workernode_map.json
[2026-03-04 01:21:19] 2026-03-04 00:20:36,237 | INFO     | this job has now completed (state=finished)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,237 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,237 | INFO     | log transfer has been attempted: DONE
[2026-03-04 01:21:19] 2026-03-04 00:20:36,237 | INFO     | job 7036160513 has finished - writing final server update
[2026-03-04 01:21:19] 2026-03-04 00:20:36,237 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_546733/.job.ad'
[2026-03-04 01:21:19] 2026-03-04 00:20:36,237 | INFO     | total number of processed events: 400 (read)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,263 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7036160513/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,264 | INFO     | extracted standard info from prmon json
[2026-03-04 01:21:19] 2026-03-04 00:20:36,264 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 01:21:19] 2026-03-04 00:20:36,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 01:21:19] 2026-03-04 00:20:36,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 01:21:19] 2026-03-04 00:20:36,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 01:21:19] 2026-03-04 00:20:36,265 | INFO     | fitting pss+swap vs Time
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | sum of square deviations: 241429643.0
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | sum of deviations: 216050989.50000003
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | mean x: 1772580703.5
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | mean y: 2318256.5760869565
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | intersect: -1583931924.6403975
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | chi2: 0.00037421341348895903
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | current memory leak: 0.89 B/s (using 92 data points, chi2=0.00)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | could have reported an average CPU frequency of 3591 MHz (7 samples)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | ..............................
[2026-03-04 01:21:19] 2026-03-04 00:20:36,266 | INFO     | . Timing measurements:
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | . get job = 0 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | . initial setup = 5 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | . payload setup = 5 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | . stage-in = 0 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | . payload execution = 6010 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | . stage-out = 0 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | . log creation = 0 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,267 | INFO     | ..............................
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | 
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | job summary report
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | --------------------------------------------------
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | PanDA job id: 7036160513
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | task id: 48852130
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | errors: (none)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | pilot state: finished 
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | transexitcode: 0
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | exeerrorcode: 0
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | exeerrordiag: 
[2026-03-04 01:21:19] 2026-03-04 00:20:36,670 | INFO     | exitcode: 0
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | exitmsg: OK
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | cpuconsumptiontime: 22942 s
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | nevents: 400
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | neventsw: 0
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | pid: 924175
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | pgrp: 924175
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | corecount: 4
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | event service: False
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | sizes: {0: 2286799, 1: 2287260, 11: 2287260, 6020: 2314107, 6022: 2323129, 6023: 2323507}
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | --------------------------------------------------
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | 
[2026-03-04 01:21:19] 2026-03-04 00:20:36,671 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot152/slots/0
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | job 7036160513 has completed (purged errors)
[2026-03-04 01:21:19] 2026-03-04 00:20:36,718 | INFO     | overall cleanup function is called
[2026-03-04 01:21:19] 2026-03-04 00:20:37,014 | INFO     | PID=910602 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 01:21:19] 2026-03-04 00:20:37,014 | INFO     | .. there are 53 such processes running
[2026-03-04 01:21:19] 2026-03-04 00:20:37,725 | INFO     | --- collectZombieJob: --- 10, [924175]
[2026-03-04 01:21:19] 2026-03-04 00:20:37,725 | INFO     | zombie collector waiting for pid 924175
[2026-03-04 01:21:19] 2026-03-04 00:20:37,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 01:21:19] 2026-03-04 00:20:37,725 | INFO     | collected zombie processes
[2026-03-04 01:21:19] 2026-03-04 00:20:37,725 | INFO     | will attempt to kill all subprocesses of pid=924175
[2026-03-04 01:21:19] 2026-03-04 00:20:38,245 | INFO     | process IDs to be killed: [924175] (in reverse order)
[2026-03-04 01:21:19] 2026-03-04 00:20:38,512 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 01:21:19] 2026-03-04 00:20:38,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 01:21:19] 2026-03-04 00:20:38,541 | INFO     | did not find any defunct processes belonging to 924175
[2026-03-04 01:21:19] 2026-03-04 00:20:38,569 | INFO     | did not find any defunct processes belonging to 924175
[2026-03-04 01:21:19] 2026-03-04 00:20:38,570 | INFO     | ready for new job
[2026-03-04 01:21:19] 2026-03-04 00:20:38,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 01:21:19] 2026-03-04 00:20:38,571 | INFO     | **************************************
[2026-03-04 01:21:19] 2026-03-04 00:20:38,571 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 01:21:19] 2026-03-04 00:20:38,571 | INFO     | **************************************
[2026-03-04 01:21:19] 2026-03-04 00:20:38,571 | INFO     | 
[2026-03-04 01:21:19] 2026-03-04 00:20:38,577 | INFO     | architecture information:
[2026-03-04 01:21:19] 2026-03-04 00:20:38,577 | INFO     | executing command: cat /etc/os-release
[2026-03-04 01:21:19] 2026-03-04 00:20:38,608 | INFO     | cat /etc/os-release:
[2026-03-04 01:21:19] NAME="CentOS Linux"
[2026-03-04 01:21:19] VERSION="7 (Core)"
[2026-03-04 01:21:19] ID="centos"
[2026-03-04 01:21:19] ID_LIKE="rhel fedora"
[2026-03-04 01:21:19] VERSION_ID="7"
[2026-03-04 01:21:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 01:21:19] ANSI_COLOR="0;31"
[2026-03-04 01:21:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 01:21:19] HOME_URL="https://www.centos.org/"
[2026-03-04 01:21:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 01:21:19] 
[2026-03-04 01:21:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 01:21:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 01:21:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 01:21:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 01:21:19] 
[2026-03-04 01:21:19] 2026-03-04 00:20:38,608 | INFO     | **************************************
[2026-03-04 01:21:19] 2026-03-04 00:20:39,110 | INFO     | executing command: df -mP /var/lib/boinc/var/slot152/slots/0
[2026-03-04 01:21:19] 2026-03-04 00:20:39,132 | INFO     | sufficient remaining disk space (21315452928 B)
[2026-03-04 01:21:19] 2026-03-04 00:20:39,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 01:21:19] 2026-03-04 00:20:39,132 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 01:21:19] 2026-03-04 00:20:39,132 | INFO     | update_server=False
[2026-03-04 01:21:19] 2026-03-04 00:20:39,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 01:21:19] 2026-03-04 00:20:39,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 01:21:19] 2026-03-04 00:20:39,143 | INFO     | all payload control threads have been joined
[2026-03-04 01:21:19] 2026-03-04 00:20:39,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 01:21:19] 2026-03-04 00:20:39,204 | INFO     | aborting loop
[2026-03-04 01:21:19] 2026-03-04 00:20:39,344 | INFO     | job.realtimelogging is not enabled
[2026-03-04 01:21:19] 2026-03-04 00:20:39,454 | INFO     | all job control threads have been joined
[2026-03-04 01:21:19] 2026-03-04 00:20:39,849 | INFO     | all data control threads have been joined
[2026-03-04 01:21:19] 2026-03-04 00:20:40,138 | INFO     | [job] retrieve thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,151 | INFO     | [payload] control thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,209 | INFO     | [job] job monitor thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,276 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,338 | INFO     | [payload] failed_post thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,459 | INFO     | [job] control thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,523 | INFO     | [job] validate thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,741 | INFO     | [payload] validate_post thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,838 | INFO     | [data] copytool_in thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,854 | INFO     | [data] control thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:40,961 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:41,139 | INFO     | [data] copytool_out thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:41,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 01:21:19] 2026-03-04 00:20:41,396 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:42,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 01:21:19] 2026-03-04 00:20:42,329 | INFO     | [job] queue monitor thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:20:46,245 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 01:21:19] 2026-03-04 00:21:09,682 | INFO     | PID=910602 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 01:21:19] 2026-03-04 00:21:09,687 | INFO     | .. there are 53 such processes running
[2026-03-04 01:21:19] 2026-03-04 00:21:09,688 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 01:21:19] 2026-03-04 00:21:09,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 01:21:19] 2026-03-04 00:21:09,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 01:21:19] 2026-03-04 00:21:12,194 | INFO     | [monitor] cgroup control has ended
[2026-03-04 01:21:19] 2026-03-04 00:21:13,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22712756139840)>', '<ExcThread(monitor, started 22712441337600)>']
[2026-03-04 01:21:19] 2026-03-04 00:21:14,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 01:21:19] 2026-03-04 00:21:14,713 | INFO     | [monitor] control thread has ended
[2026-03-04 01:21:19] 2026-03-04 00:21:18,768 | INFO     | all workflow threads have been joined
[2026-03-04 01:21:19] 2026-03-04 00:21:18,768 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 01:21:19] 2026-03-04 00:21:18,768 | INFO     | traces error code: 0
[2026-03-04 01:21:19] 2026-03-04 00:21:18,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 01:21:19] 2026-03-04 00:21:18,895 [wrapper] ==== pilot stdout END ====
[2026-03-04 01:21:19] 2026-03-04 00:21:18,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 01:21:19] 2026-03-04 00:21:18,900 [wrapper] pilotpid: 910602
[2026-03-04 01:21:19] 2026-03-04 00:21:18,902 [wrapper] Pilot exit status: 0
[2026-03-04 01:21:19] 2026-03-04 00:21:18,911 [wrapper] pandaids: 7036160513
[2026-03-04 01:21:19] 2026-03-04 00:21:19,035 [wrapper] cleanup supervisor_pilot 1699952 910603
[2026-03-04 01:21:19] 2026-03-04 00:21:19,038 [wrapper] Test setup, not cleaning
[2026-03-04 01:21:19] 2026-03-04 00:21:19,048 [wrapper] apfmon messages muted
[2026-03-04 01:21:19] 2026-03-04 00:21:19,059 [wrapper] ==== wrapper stdout END ====
[2026-03-04 01:21:19] 2026-03-04 00:21:19,065 [wrapper] ==== wrapper stderr END ====
[2026-03-04 01:21:19]  *** Error codes and diagnostics ***
[2026-03-04 01:21:19]     "exeErrorCode": 0,
[2026-03-04 01:21:19]     "exeErrorDiag": "",
[2026-03-04 01:21:19]     "pilotErrorCode": 0,
[2026-03-04 01:21:19]     "pilotErrorDiag": "",
[2026-03-04 01:21:19]  *** Listing of results directory ***
[2026-03-04 01:21:19] total 343508
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc      5111 Mar  3 01:02 queuedata.json
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc    584627 Mar  3 01:05 pilot3.tar.gz
[2026-03-04 01:21:19] -rwx------. 1 boinc boinc     36322 Mar  3 01:05 runpilot2-wrapper.sh
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc       100 Mar  3 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 01:21:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 23:39 run_atlas
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc       105 Mar  3 23:39 job.xml
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc      6707 Mar  3 23:39 init_data.xml
[2026-03-04 01:21:19] -rw-r--r--. 2 boinc boinc 200714762 Mar  3 23:39 EVNT.48461862._000001.pool.root.1
[2026-03-04 01:21:19] -rw-r--r--. 2 boinc boinc     15845 Mar  3 23:39 start_atlas.sh
[2026-03-04 01:21:19] drwxrwx--x. 2 boinc boinc      4096 Mar  3 23:39 shared
[2026-03-04 01:21:19] -rw-r--r--. 2 boinc boinc    597982 Mar  3 23:39 input.tar.gz
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc         0 Mar  3 23:39 boinc_lockfile
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc      2690 Mar  3 23:39 pandaJob.out
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc    998484 Mar  3 23:39 agis_schedconf.cvmfs.json
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc   1516092 Mar  3 23:39 agis_ddmendpoints.agis.ALL.json
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc       445 Mar  3 23:40 workernode_map.json
[2026-03-04 01:21:19] drwx------. 5 boinc boinc      4096 Mar  3 23:40 pilot3
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc 144783398 Mar  4 01:20 HITS.48852130._000014.pool.root.1
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc      1031 Mar  4 01:20 memory_monitor_summary.json
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc       529 Mar  4 01:20 boinc_task_state.xml
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc    288889 Mar  4 01:20 log.48852130._000014.job.log.tgz.1
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc      6343 Mar  4 01:20 heartbeat.json
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc      8192 Mar  4 01:21 boinc_mmap_file
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc        27 Mar  4 01:21 wrapper_checkpoint.txt
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc        95 Mar  4 01:21 pilot_heartbeat.json
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc      4901 Mar  4 01:21 pilotlog.txt
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc    868472 Mar  4 01:21 log.48852130._000014.job.log.1
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc       357 Mar  4 01:21 output.list
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc       620 Mar  4 01:21 runtime_log
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc   1177600 Mar  4 01:21 result.tar.gz
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc      9221 Mar  4 01:21 runtime_log.err
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc       663 Mar  4 01:21 X8DODmhRSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3DDLDm1J1TCo.diag
[2026-03-04 01:21:19] -rw-r--r--. 1 boinc boinc     21518 Mar  4 01:21 stderr.txt
[2026-03-04 01:21:19] HITS file was successfully produced:
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc 144783398 Mar  4 01:20 shared/HITS.pool.root.1
[2026-03-04 01:21:19]  *** Contents of shared directory: ***
[2026-03-04 01:21:19] total 339164
[2026-03-04 01:21:19] -rw-r--r--. 2 boinc boinc 200714762 Mar  3 23:39 ATLAS.root_0
[2026-03-04 01:21:19] -rw-r--r--. 2 boinc boinc     15845 Mar  3 23:39 start_atlas.sh
[2026-03-04 01:21:19] -rw-r--r--. 2 boinc boinc    597982 Mar  3 23:39 input.tar.gz
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc 144783398 Mar  4 01:20 HITS.pool.root.1
[2026-03-04 01:21:19] -rw-------. 1 boinc boinc   1177600 Mar  4 01:21 result.tar.gz
01:21:20 (906066): run_atlas exited; CPU time 23203.207381
01:21:20 (906066): called boinc_finish(0)

</stderr_txt>
]]>

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