Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:27:09 (24385): wrapper (7.7.26015): starting
00:27:09 (24385): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 00:27:09] Arguments: --nthreads 12
[2026-03-03 00:27:09] Threads: 12
[2026-03-03 00:27:09] Checking for CVMFS
[2026-03-03 00:27:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:27:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:27:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:27:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:27:10] 2.11.2.0 2914 426941 98660 156834 0 51 10757826 20275201 1 130560 1 182996503 99.954 24488954 17122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 00:27:10] CVMFS is ok
[2026-03-03 00:27:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:27:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:27:10] Further information can be found at the LHC@home message board.
[2026-03-03 00:27:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:27:10] Checking for apptainer binary...
[2026-03-03 00:27:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:27:10] Running /usr/bin/apptainer --version
[2026-03-03 00:27:10] apptainer version 1.3.2-1.el7
[2026-03-03 00:27:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:27:11] c-205-5.aglt2.org
[2026-03-03 00:27:11] apptainer works
[2026-03-03 00:27:11] Set ATHENA_PROC_NUMBER=12
[2026-03-03 00:27:11] Set ATHENA_CORE_NUMBER=12
[2026-03-03 00:27:11] Starting ATLAS job with PandaID=7036056665
[2026-03-03 00:27:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 01:50:46]  *** The last 200 lines of the pilot log: ***
[2026-03-03 01:50:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 01:50:46]  is_altstaged=None
[2026-03-03 01:50:46]  is_tar=False
[2026-03-03 01:50:46]  lfn=log.48838586._001923.job.log.tgz.1
[2026-03-03 01:50:46]  mtime=0
[2026-03-03 01:50:46]  protocol_id=None
[2026-03-03 01:50:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 01:50:46]  replicas=None
[2026-03-03 01:50:46]  scope=mc23_13p6TeV
[2026-03-03 01:50:46]  status=None
[2026-03-03 01:50:46]  status_code=0
[2026-03-03 01:50:46]  storage_token=
[2026-03-03 01:50:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7036056665/log.48838586._001923.job.log.tgz.1
[2026-03-03 01:50:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/d4/log.48838586._001923.job.log.tgz.1
[2026-03-03 01:50:46]  workdir=None
[2026-03-03 01:50:46] ]
[2026-03-03 01:50:46] 2026-03-03 06:50:02,640 | INFO     | transferring file log.48838586._001923.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7036056665/log.48838586._001923.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-03 01:50:46] 2026-03-03 06:50:02,640 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7036056665/log.48838586._001923.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838586._001923.job
[2026-03-03 01:50:46] 2026-03-03 06:50:02,662 | INFO     | adding to output.list: log.48838586._001923.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/d4/log.48838586._001923.job.log.tg
[2026-03-03 01:50:46] 2026-03-03 06:50:02,663 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 01:50:46] 2026-03-03 06:50:02,663 | INFO     | summary of transferred files:
[2026-03-03 01:50:46] 2026-03-03 06:50:02,664 | INFO     |  -- lfn=log.48838586._001923.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 01:50:46] 2026-03-03 06:50:02,664 | INFO     | stage-out finished correctly
[2026-03-03 01:50:46] 2026-03-03 06:50:02,746 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 01:50:46] 2026-03-03 06:50:03,433 | INFO     | time since job start (4951s) is within the limit (349056.0s)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,315 | INFO     | job 7036056665 has state=finished
[2026-03-03 01:50:46] 2026-03-03 06:50:04,315 | INFO     | preparing for final server update for job 7036056665 in state='finished'
[2026-03-03 01:50:46] 2026-03-03 06:50:04,337 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036056665/jobReport.json
[2026-03-03 01:50:46] 2026-03-03 06:50:04,340 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 01:50:46] 2026-03-03 06:50:04,340 | INFO     | this job has now completed (state=finished)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,341 | INFO     | log transfer has been attempted: DONE
[2026-03-03 01:50:46] 2026-03-03 06:50:04,341 | INFO     | job 7036056665 has finished - writing final server update
[2026-03-03 01:50:46] 2026-03-03 06:50:04,341 | INFO     | total number of processed events: 400 (read)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,344 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036056665/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,345 | INFO     | extracted standard info from prmon json
[2026-03-03 01:50:46] 2026-03-03 06:50:04,345 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 01:50:46] 2026-03-03 06:50:04,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 01:50:46] 2026-03-03 06:50:04,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 01:50:46] 2026-03-03 06:50:04,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 01:50:46] 2026-03-03 06:50:04,348 | INFO     | fitting pss+swap vs Time
[2026-03-03 01:50:46] 2026-03-03 06:50:04,348 | INFO     | sum of square deviations: 125630262.5
[2026-03-03 01:50:46] 2026-03-03 06:50:04,348 | INFO     | sum of deviations: -10352592918.0
[2026-03-03 01:50:46] 2026-03-03 06:50:04,348 | INFO     | mean x: 1772518207.5
[2026-03-03 01:50:46] 2026-03-03 06:50:04,349 | INFO     | mean y: 2874982.243243243
[2026-03-03 01:50:46] 2026-03-03 06:50:04,349 | INFO     | intersect: 146067677179.01135
[2026-03-03 01:50:46] 2026-03-03 06:50:04,349 | INFO     | chi2: 0.064905958378345
[2026-03-03 01:50:46] 2026-03-03 06:50:04,349 | INFO     | current memory leak: -82.41 B/s (using 74 data points, chi2=0.06)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,349 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | ..............................
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . Timing measurements:
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . get job = 0 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . initial setup = 7 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . payload setup = 7 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . stage-in = 0 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . payload execution = 4927 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . stage-out = 0 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,350 | INFO     | . log creation = 0 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,351 | INFO     | ..............................
[2026-03-03 01:50:46] 2026-03-03 06:50:04,532 | INFO     | 
[2026-03-03 01:50:46] 2026-03-03 06:50:04,532 | INFO     | job summary report
[2026-03-03 01:50:46] 2026-03-03 06:50:04,533 | INFO     | --------------------------------------------------
[2026-03-03 01:50:46] 2026-03-03 06:50:04,533 | INFO     | PanDA job id: 7036056665
[2026-03-03 01:50:46] 2026-03-03 06:50:04,533 | INFO     | task id: 48838586
[2026-03-03 01:50:46] 2026-03-03 06:50:04,533 | INFO     | errors: (none)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,533 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 01:50:46] 2026-03-03 06:50:04,534 | INFO     | pilot state: finished 
[2026-03-03 01:50:46] 2026-03-03 06:50:04,534 | INFO     | transexitcode: 0
[2026-03-03 01:50:46] 2026-03-03 06:50:04,535 | INFO     | exeerrorcode: 0
[2026-03-03 01:50:46] 2026-03-03 06:50:04,535 | INFO     | exeerrordiag: 
[2026-03-03 01:50:46] 2026-03-03 06:50:04,535 | INFO     | exitcode: 0
[2026-03-03 01:50:46] 2026-03-03 06:50:04,535 | INFO     | exitmsg: OK
[2026-03-03 01:50:46] 2026-03-03 06:50:04,536 | INFO     | cpuconsumptiontime: 54686 s
[2026-03-03 01:50:46] 2026-03-03 06:50:04,536 | INFO     | nevents: 400
[2026-03-03 01:50:46] 2026-03-03 06:50:04,536 | INFO     | neventsw: 0
[2026-03-03 01:50:46] 2026-03-03 06:50:04,536 | INFO     | pid: 32543
[2026-03-03 01:50:46] 2026-03-03 06:50:04,536 | INFO     | pgrp: 32543
[2026-03-03 01:50:46] 2026-03-03 06:50:04,536 | INFO     | corecount: 12
[2026-03-03 01:50:46] 2026-03-03 06:50:04,536 | INFO     | event service: False
[2026-03-03 01:50:46] 2026-03-03 06:50:04,537 | INFO     | sizes: {0: 2281733, 1: 2282250, 12: 2282250, 4938: 2308522, 4939: 2317576, 4941: 2317714}
[2026-03-03 01:50:46] 2026-03-03 06:50:04,537 | INFO     | --------------------------------------------------
[2026-03-03 01:50:46] 2026-03-03 06:50:04,537 | INFO     | 
[2026-03-03 01:50:46] 2026-03-03 06:50:04,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 01:50:46] 2026-03-03 06:50:04,561 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,562 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,562 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,562 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,565 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,566 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 01:50:46] 2026-03-03 06:50:04,566 | INFO     | job 7036056665 has completed (purged errors)
[2026-03-03 01:50:46] 2026-03-03 06:50:04,566 | INFO     | overall cleanup function is called
[2026-03-03 01:50:46] 2026-03-03 06:50:04,573 | INFO     | PID=28058 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 01:50:46] 2026-03-03 06:50:05,575 | INFO     | --- collectZombieJob: --- 10, [32543]
[2026-03-03 01:50:46] 2026-03-03 06:50:05,575 | INFO     | zombie collector waiting for pid 32543
[2026-03-03 01:50:46] 2026-03-03 06:50:05,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 01:50:46] 2026-03-03 06:50:05,576 | INFO     | collected zombie processes
[2026-03-03 01:50:46] 2026-03-03 06:50:05,576 | INFO     | will attempt to kill all subprocesses of pid=32543
[2026-03-03 01:50:46] 2026-03-03 06:50:05,670 | INFO     | process IDs to be killed: [32543] (in reverse order)
[2026-03-03 01:50:46] 2026-03-03 06:50:05,722 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 01:50:46] 2026-03-03 06:50:05,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 01:50:46] 2026-03-03 06:50:05,726 | INFO     | did not find any defunct processes belonging to 32543
[2026-03-03 01:50:46] 2026-03-03 06:50:05,729 | INFO     | did not find any defunct processes belonging to 32543
[2026-03-03 01:50:46] 2026-03-03 06:50:05,730 | INFO     | ready for new job
[2026-03-03 01:50:46] 2026-03-03 06:50:05,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 01:50:46] 2026-03-03 06:50:05,731 | INFO     | **************************************
[2026-03-03 01:50:46] 2026-03-03 06:50:05,731 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 01:50:46] 2026-03-03 06:50:05,731 | INFO     | **************************************
[2026-03-03 01:50:46] 2026-03-03 06:50:05,731 | INFO     | 
[2026-03-03 01:50:46] 2026-03-03 06:50:05,732 | INFO     | architecture information:
[2026-03-03 01:50:46] 2026-03-03 06:50:05,732 | INFO     | executing command: cat /etc/os-release
[2026-03-03 01:50:46] 2026-03-03 06:50:05,748 | INFO     | cat /etc/os-release:
[2026-03-03 01:50:46] NAME="CentOS Linux"
[2026-03-03 01:50:46] VERSION="7 (Core)"
[2026-03-03 01:50:46] ID="centos"
[2026-03-03 01:50:46] ID_LIKE="rhel fedora"
[2026-03-03 01:50:46] VERSION_ID="7"
[2026-03-03 01:50:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 01:50:46] ANSI_COLOR="0;31"
[2026-03-03 01:50:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 01:50:46] HOME_URL="https://www.centos.org/"
[2026-03-03 01:50:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 01:50:46] 
[2026-03-03 01:50:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 01:50:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 01:50:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 01:50:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 01:50:46] 
[2026-03-03 01:50:46] 2026-03-03 06:50:05,748 | INFO     | **************************************
[2026-03-03 01:50:46] 2026-03-03 06:50:06,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 01:50:46] 2026-03-03 06:50:06,268 | INFO     | sufficient remaining disk space (29197598720 B)
[2026-03-03 01:50:46] 2026-03-03 06:50:06,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 01:50:46] 2026-03-03 06:50:06,269 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 01:50:46] 2026-03-03 06:50:06,269 | INFO     | update_server=False
[2026-03-03 01:50:46] 2026-03-03 06:50:06,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 01:50:46] 2026-03-03 06:50:06,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 01:50:46] 2026-03-03 06:50:06,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 01:50:46] 2026-03-03 06:50:06,449 | INFO     | all data control threads have been joined
[2026-03-03 01:50:46] 2026-03-03 06:50:06,907 | INFO     | all payload control threads have been joined
[2026-03-03 01:50:46] 2026-03-03 06:50:07,275 | INFO     | [job] retrieve thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:07,275 | INFO     | [job] queue monitor thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:07,301 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:07,455 | INFO     | [data] control thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:07,461 | INFO     | all job control threads have been joined
[2026-03-03 01:50:46] 2026-03-03 06:50:07,629 | INFO     | [data] copytool_in thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:07,644 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:07,679 | INFO     | [payload] validate_post thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:07,913 | INFO     | [payload] control thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:08,002 | WARNING  | process 32543 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 01:50:46] 2026-03-03 06:50:08,077 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 01:50:46] 2026-03-03 06:50:08,166 | INFO     | number of running child processes to parent process 32543: 1
[2026-03-03 01:50:46] 2026-03-03 06:50:08,166 | INFO     | maximum number of monitored processes: 6
[2026-03-03 01:50:46] 2026-03-03 06:50:08,166 | INFO     | aborting job monitoring since job object (job id=7036056665) has expired
[2026-03-03 01:50:46] 2026-03-03 06:50:08,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 01:50:46] 2026-03-03 06:50:08,166 | INFO     | will abort loop
[2026-03-03 01:50:46] 2026-03-03 06:50:08,200 | INFO     | [payload] failed_post thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:08,260 | INFO     | [job] validate thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:08,276 | INFO     | [data] copytool_out thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:08,466 | INFO     | [job] control thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:08,689 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:08,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 01:50:46] 2026-03-03 06:50:09,172 | INFO     | [job] job monitor thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:12,837 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:16,780 | INFO     | job.realtimelogging is not enabled
[2026-03-03 01:50:46] 2026-03-03 06:50:17,783 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 01:50:46] 2026-03-03 06:50:36,774 | INFO     | PID=28058 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 01:50:46] 2026-03-03 06:50:36,775 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 01:50:46] 2026-03-03 06:50:36,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 01:50:46] 2026-03-03 06:50:36,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 01:50:46] 2026-03-03 06:50:39,625 | INFO     | [monitor] cgroup control has ended
[2026-03-03 01:50:46] 2026-03-03 06:50:41,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717224052544)>', '<ExcThread(monitor, started 140716768466688)>']
[2026-03-03 01:50:46] 2026-03-03 06:50:41,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 01:50:46] 2026-03-03 06:50:41,798 | INFO     | [monitor] control thread has ended
[2026-03-03 01:50:46] 2026-03-03 06:50:46,162 | INFO     | all workflow threads have been joined
[2026-03-03 01:50:46] 2026-03-03 06:50:46,162 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 01:50:46] 2026-03-03 06:50:46,162 | INFO     | traces error code: 0
[2026-03-03 01:50:46] 2026-03-03 06:50:46,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 01:50:46] 2026-03-03 06:50:46,255 [wrapper] ==== pilot stdout END ====
[2026-03-03 01:50:46] 2026-03-03 06:50:46,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 01:50:46] 2026-03-03 06:50:46,264 [wrapper] pilotpid: 28058
[2026-03-03 01:50:46] 2026-03-03 06:50:46,267 [wrapper] Pilot exit status: 0
[2026-03-03 01:50:46] 2026-03-03 06:50:46,283 [wrapper] pandaids: 7036056665
[2026-03-03 01:50:46] 2026-03-03 06:50:46,326 [wrapper] cleanup supervisor_pilot 22382 28059
[2026-03-03 01:50:46] 2026-03-03 06:50:46,330 [wrapper] Test setup, not cleaning
[2026-03-03 01:50:46] 2026-03-03 06:50:46,334 [wrapper] apfmon messages muted
[2026-03-03 01:50:46] 2026-03-03 06:50:46,337 [wrapper] ==== wrapper stdout END ====
[2026-03-03 01:50:46] 2026-03-03 06:50:46,342 [wrapper] ==== wrapper stderr END ====
[2026-03-03 01:50:46]  *** Error codes and diagnostics ***
[2026-03-03 01:50:46]     "exeErrorCode": 0,
[2026-03-03 01:50:46]     "exeErrorDiag": "",
[2026-03-03 01:50:46]     "pilotErrorCode": 0,
[2026-03-03 01:50:46]     "pilotErrorDiag": "",
[2026-03-03 01:50:46]  *** Listing of results directory ***
[2026-03-03 01:50:46] total 487380
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 12:50 pilot3.tar.gz
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 13:01 queuedata.json
[2026-03-03 01:50:46] -rwx------ 1 boincer umatlas     36322 Mar  2 13:02 runpilot2-wrapper.sh
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas       100 Mar  3 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 01:50:46] -rwxr-xr-x 1 boincer umatlas      7986 Mar  3 00:27 run_atlas
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas       105 Mar  3 00:27 job.xml
[2026-03-03 01:50:46] -rw-r--r-- 2 boincer umatlas 278351118 Mar  3 00:27 EVNT.48220221._000075.pool.root.1
[2026-03-03 01:50:46] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 00:27 start_atlas.sh
[2026-03-03 01:50:46] drwxrwx--x 2 boincer umatlas      4096 Mar  3 00:27 shared
[2026-03-03 01:50:46] -rw-r--r-- 2 boincer umatlas    597961 Mar  3 00:27 input.tar.gz
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas         0 Mar  3 00:27 boinc_lockfile
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas      2561 Mar  3 00:27 pandaJob.out
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas        57 Mar  3 00:27 setup.sh.local
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas    997730 Mar  3 00:27 agis_schedconf.cvmfs.json
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas   1512931 Mar  3 00:27 agis_ddmendpoints.agis.ALL.json
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas       433 Mar  3 00:27 workernode_map.json
[2026-03-03 01:50:46] drwx------ 5 boincer umatlas      4096 Mar  3 00:27 pilot3
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas      5952 Mar  3 01:49 init_data.xml
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas 214600801 Mar  3 01:49 HITS.48838586._001923.pool.root.1
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas      1043 Mar  3 01:49 memory_monitor_summary.json
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas       529 Mar  3 01:50 boinc_task_state.xml
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas    377960 Mar  3 01:50 log.48838586._001923.job.log.tgz.1
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas      6399 Mar  3 01:50 heartbeat.json
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas        95 Mar  3 01:50 pilot_heartbeat.json
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 01:50 boinc_mmap_file
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas        27 Mar  3 01:50 wrapper_checkpoint.txt
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas      5331 Mar  3 01:50 pilotlog.txt
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas    715971 Mar  3 01:50 log.48838586._001923.job.log.1
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas       357 Mar  3 01:50 output.list
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas       620 Mar  3 01:50 runtime_log
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas   1116160 Mar  3 01:50 result.tar.gz
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas      9338 Mar  3 01:50 runtime_log.err
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas       658 Mar  3 01:50 NZyNDmEmMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsJELDmID6Usn.diag
[2026-03-03 01:50:46] -rw-r--r-- 1 boincer umatlas     21510 Mar  3 01:50 stderr.txt
[2026-03-03 01:50:46] HITS file was successfully produced:
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas 214600801 Mar  3 01:49 shared/HITS.pool.root.1
[2026-03-03 01:50:46]  *** Contents of shared directory: ***
[2026-03-03 01:50:46] total 483100
[2026-03-03 01:50:46] -rw-r--r-- 2 boincer umatlas 278351118 Mar  3 00:27 ATLAS.root_0
[2026-03-03 01:50:46] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 00:27 start_atlas.sh
[2026-03-03 01:50:46] -rw-r--r-- 2 boincer umatlas    597961 Mar  3 00:27 input.tar.gz
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas 214600801 Mar  3 01:49 HITS.pool.root.1
[2026-03-03 01:50:46] -rw------- 1 boincer umatlas   1116160 Mar  3 01:50 result.tar.gz
01:50:48 (24385): run_atlas exited; CPU time 54666.081459
01:50:48 (24385): called boinc_finish(0)

</stderr_txt>
]]>

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