Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:59:51 (3522031): wrapper (7.7.26015): starting
05:59:51 (3522031): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 05:59:51] Arguments: --nthreads 4
[2026-03-05 05:59:51] Threads: 4
[2026-03-05 05:59:51] Checking for CVMFS
[2026-03-05 05:59:51] No cvmfs_config command found, will try listing directly
[2026-03-05 05:59:51] CVMFS is ok
[2026-03-05 05:59:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 05:59:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 05:59:51] Further information can be found at the LHC@home message board.
[2026-03-05 05:59:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 05:59:51] Checking for apptainer binary...
[2026-03-05 05:59:51] which: no apptainer in ((null))
[2026-03-05 05:59:51] apptainer is not installed, using version from CVMFS
[2026-03-05 05:59:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 05:59:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-05 05:59:51] apptainer works
[2026-03-05 05:59:51] Set ATHENA_PROC_NUMBER=4
[2026-03-05 05:59:51] Set ATHENA_CORE_NUMBER=4
[2026-03-05 05:59:51] Starting ATLAS job with PandaID=7036207533
[2026-03-05 05:59:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 07:36:19]  *** The last 200 lines of the pilot log: ***
[2026-03-05 07:36:19]  lfn=log.48838447._004386.job.log.tgz.1
[2026-03-05 07:36:19]  mtime=0
[2026-03-05 07:36:19]  protocol_id=None
[2026-03-05 07:36:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 07:36:19]  replicas=None
[2026-03-05 07:36:19]  scope=mc23_13p6TeV
[2026-03-05 07:36:19]  status=None
[2026-03-05 07:36:19]  status_code=0
[2026-03-05 07:36:19]  storage_token=
[2026-03-05 07:36:19]  surl=/var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7036207533/log.48838447._004386.job.log.tgz.1
[2026-03-05 07:36:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/e3/log.48838447._004386.job.log.tgz.1
[2026-03-05 07:36:19]  workdir=None
[2026-03-05 07:36:19] ]
[2026-03-05 07:36:19] 2026-03-05 06:35:25,060 | INFO     | transferring file log.48838447._004386.job.log.tgz.1 from /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7036207533/log.48838447._004386.job.log.tgz.1 to /var/lib/b
[2026-03-05 07:36:19] 2026-03-05 06:35:25,061 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7036207533/log.48838447._004386.job.log.tgz.1 /var/lib/boinc/var/slot88/slots/2/lo
[2026-03-05 07:36:19] 2026-03-05 06:35:25,076 | INFO     | adding to output.list: log.48838447._004386.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/e3/log.48838447._004386.job.log.tg
[2026-03-05 07:36:19] 2026-03-05 06:35:25,077 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 07:36:19] 2026-03-05 06:35:25,077 | INFO     | summary of transferred files:
[2026-03-05 07:36:19] 2026-03-05 06:35:25,077 | INFO     |  -- lfn=log.48838447._004386.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 07:36:19] 2026-03-05 06:35:25,077 | INFO     | stage-out finished correctly
[2026-03-05 07:36:19] 2026-03-05 06:35:26,427 | INFO     | PID=3526610 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 07:36:19] 2026-03-05 06:35:26,428 | INFO     | .. there are 48 such processes running
[2026-03-05 07:36:19] 2026-03-05 06:35:27,428 | INFO     | time since job start (5724s) is within the limit (349056.0s)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,014 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 07:36:19] 2026-03-05 06:35:28,850 | INFO     | job 7036207533 has state=finished
[2026-03-05 07:36:19] 2026-03-05 06:35:28,850 | INFO     | preparing for final server update for job 7036207533 in state='finished'
[2026-03-05 07:36:19] 2026-03-05 06:35:28,850 | INFO     | reading metadata from: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7036207533/jobReport.json
[2026-03-05 07:36:19] 2026-03-05 06:35:28,852 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot88/slots/2/workernode_map.json
[2026-03-05 07:36:19] 2026-03-05 06:35:28,852 | INFO     | this job has now completed (state=finished)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,852 | INFO     | log transfer has been attempted: DONE
[2026-03-05 07:36:19] 2026-03-05 06:35:28,852 | INFO     | job 7036207533 has finished - writing final server update
[2026-03-05 07:36:19] 2026-03-05 06:35:28,853 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_956373/.job.ad'
[2026-03-05 07:36:19] 2026-03-05 06:35:28,853 | INFO     | total number of processed events: 400 (read)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,872 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7036207533/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,872 | INFO     | extracted standard info from prmon json
[2026-03-05 07:36:19] 2026-03-05 06:35:28,872 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 07:36:19] 2026-03-05 06:35:28,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 07:36:19] 2026-03-05 06:35:28,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 07:36:19] 2026-03-05 06:35:28,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 07:36:19] 2026-03-05 06:35:28,874 | INFO     | fitting pss+swap vs Time
[2026-03-05 07:36:19] 2026-03-05 06:35:28,874 | INFO     | sum of square deviations: 204163828.0
[2026-03-05 07:36:19] 2026-03-05 06:35:28,874 | INFO     | sum of deviations: 1182734673.0000002
[2026-03-05 07:36:19] 2026-03-05 06:35:28,874 | INFO     | mean x: 1772689751.0
[2026-03-05 07:36:19] 2026-03-05 06:35:28,874 | INFO     | mean y: 2352587.8160919542
[2026-03-05 07:36:19] 2026-03-05 06:35:28,874 | INFO     | intersect: -10266957375.256489
[2026-03-05 07:36:19] 2026-03-05 06:35:28,874 | INFO     | chi2: 0.0002218951604103864
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | current memory leak: 5.79 B/s (using 87 data points, chi2=0.00)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | could have reported an average CPU frequency of 3605 MHz (7 samples)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | ..............................
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . Timing measurements:
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . get job = 0 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . initial setup = 4 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . payload setup = 4 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . stage-in = 0 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . payload execution = 5702 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . stage-out = 0 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | . log creation = 0 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,875 | INFO     | ..............................
[2026-03-05 07:36:19] 2026-03-05 06:35:28,927 | INFO     | 
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | job summary report
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | --------------------------------------------------
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | PanDA job id: 7036207533
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | task id: 48838447
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | errors: (none)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | pilot state: finished 
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | transexitcode: 0
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | exeerrorcode: 0
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | exeerrordiag: 
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | exitcode: 0
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | exitmsg: OK
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | cpuconsumptiontime: 21888 s
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | nevents: 400
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | neventsw: 0
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | pid: 3534389
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | pgrp: 3534389
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | corecount: 4
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | event service: False
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | sizes: {0: 2295569, 1: 2295859, 11: 2295859, 5710: 2322556, 5711: 2331576, 5714: 2331632, 5715: 2331954}
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | --------------------------------------------------
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | 
[2026-03-05 07:36:19] 2026-03-05 06:35:28,928 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot88/slots/2
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | job 7036207533 has completed (purged errors)
[2026-03-05 07:36:19] 2026-03-05 06:35:28,946 | INFO     | overall cleanup function is called
[2026-03-05 07:36:19] 2026-03-05 06:35:29,953 | INFO     | --- collectZombieJob: --- 10, [3534389]
[2026-03-05 07:36:19] 2026-03-05 06:35:29,953 | INFO     | zombie collector waiting for pid 3534389
[2026-03-05 07:36:19] 2026-03-05 06:35:29,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 07:36:19] 2026-03-05 06:35:29,953 | INFO     | collected zombie processes
[2026-03-05 07:36:19] 2026-03-05 06:35:29,953 | INFO     | will attempt to kill all subprocesses of pid=3534389
[2026-03-05 07:36:19] 2026-03-05 06:35:30,607 | WARNING  | process 3534389 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 07:36:19] 2026-03-05 06:35:31,877 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:36:19] 2026-03-05 06:35:32,019 | INFO     | process IDs to be killed: [3534389] (in reverse order)
[2026-03-05 07:36:19] 2026-03-05 06:35:32,258 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 07:36:19] 2026-03-05 06:35:32,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 07:36:19] 2026-03-05 06:35:32,312 | INFO     | did not find any defunct processes belonging to 3534389
[2026-03-05 07:36:19] 2026-03-05 06:35:32,359 | INFO     | did not find any defunct processes belonging to 3534389
[2026-03-05 07:36:19] 2026-03-05 06:35:32,359 | INFO     | ready for new job
[2026-03-05 07:36:19] 2026-03-05 06:35:32,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 07:36:19] 2026-03-05 06:35:32,360 | INFO     | **************************************
[2026-03-05 07:36:19] 2026-03-05 06:35:32,363 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 07:36:19] 2026-03-05 06:35:32,363 | INFO     | **************************************
[2026-03-05 07:36:19] 2026-03-05 06:35:32,363 | INFO     | 
[2026-03-05 07:36:19] 2026-03-05 06:35:32,373 | INFO     | architecture information:
[2026-03-05 07:36:19] 2026-03-05 06:35:32,373 | INFO     | executing command: cat /etc/os-release
[2026-03-05 07:36:19] 2026-03-05 06:35:32,384 | INFO     | cat /etc/os-release:
[2026-03-05 07:36:19] NAME="CentOS Linux"
[2026-03-05 07:36:19] VERSION="7 (Core)"
[2026-03-05 07:36:19] ID="centos"
[2026-03-05 07:36:19] ID_LIKE="rhel fedora"
[2026-03-05 07:36:19] VERSION_ID="7"
[2026-03-05 07:36:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 07:36:19] ANSI_COLOR="0;31"
[2026-03-05 07:36:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 07:36:19] HOME_URL="https://www.centos.org/"
[2026-03-05 07:36:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 07:36:19] 
[2026-03-05 07:36:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 07:36:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 07:36:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 07:36:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 07:36:19] 
[2026-03-05 07:36:19] 2026-03-05 06:35:32,384 | INFO     | **************************************
[2026-03-05 07:36:19] 2026-03-05 06:35:32,565 | INFO     | number of running child processes to parent process 3534389: 1
[2026-03-05 07:36:19] 2026-03-05 06:35:32,566 | INFO     | maximum number of monitored processes: 6
[2026-03-05 07:36:19] 2026-03-05 06:35:32,566 | INFO     | aborting job monitoring since job object (job id=7036207533) has expired
[2026-03-05 07:36:19] 2026-03-05 06:35:32,887 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/2
[2026-03-05 07:36:19] 2026-03-05 06:35:32,908 | INFO     | sufficient remaining disk space (20718813184 B)
[2026-03-05 07:36:19] 2026-03-05 06:35:32,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 07:36:19] 2026-03-05 06:35:32,909 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 07:36:19] 2026-03-05 06:35:32,909 | INFO     | update_server=False
[2026-03-05 07:36:19] 2026-03-05 06:35:32,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 07:36:19] 2026-03-05 06:35:32,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:36:19] 2026-03-05 06:35:32,909 | INFO     | will abort loop
[2026-03-05 07:36:19] 2026-03-05 06:35:33,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 07:36:19] 2026-03-05 06:35:33,290 | INFO     | all data control threads have been joined
[2026-03-05 07:36:19] 2026-03-05 06:35:33,914 | INFO     | [job] retrieve thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:33,914 | INFO     | [job] job monitor thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:33,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:36:19] 2026-03-05 06:35:34,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 07:36:19] 2026-03-05 06:35:34,162 | INFO     | all payload control threads have been joined
[2026-03-05 07:36:19] 2026-03-05 06:35:34,295 | INFO     | [data] control thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:34,324 | INFO     | [job] validate thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:34,499 | INFO     | all job control threads have been joined
[2026-03-05 07:36:19] 2026-03-05 06:35:34,507 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:34,570 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:34,632 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:34,757 | INFO     | [data] copytool_in thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:34,958 | INFO     | [job] queue monitor thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:34,992 | INFO     | [payload] failed_post thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:35,143 | INFO     | [data] copytool_out thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:35,167 | INFO     | [payload] control thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:35,221 | INFO     | [payload] validate_post thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:35,504 | INFO     | [job] control thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:38,074 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:35:43,641 | INFO     | job.realtimelogging is not enabled
[2026-03-05 07:36:19] 2026-03-05 06:35:44,646 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 07:36:19] 2026-03-05 06:36:01,077 | INFO     | PID=3526610 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-05 07:36:19] 2026-03-05 06:36:01,077 | INFO     | .. there are 48 such processes running
[2026-03-05 07:36:19] 2026-03-05 06:36:01,078 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 07:36:19] 2026-03-05 06:36:01,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 07:36:19] 2026-03-05 06:36:01,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 07:36:19] 2026-03-05 06:36:12,440 | INFO     | [monitor] cgroup control has ended
[2026-03-05 07:36:19] 2026-03-05 06:36:13,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23236375369536)>', '<ExcThread(monitor, started 23236137203456)>']
[2026-03-05 07:36:19] 2026-03-05 06:36:14,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 07:36:19] 2026-03-05 06:36:14,143 | INFO     | [monitor] control thread has ended
[2026-03-05 07:36:19] 2026-03-05 06:36:18,800 | INFO     | all workflow threads have been joined
[2026-03-05 07:36:19] 2026-03-05 06:36:18,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 07:36:19] 2026-03-05 06:36:18,800 | INFO     | traces error code: 0
[2026-03-05 07:36:19] 2026-03-05 06:36:18,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 07:36:19] 2026-03-05 06:36:18,942 [wrapper] ==== pilot stdout END ====
[2026-03-05 07:36:19] 2026-03-05 06:36:18,947 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 07:36:19] 2026-03-05 06:36:18,950 [wrapper] pilotpid: 3526610
[2026-03-05 07:36:19] 2026-03-05 06:36:18,952 [wrapper] Pilot exit status: 0
[2026-03-05 07:36:19] 2026-03-05 06:36:18,960 [wrapper] pandaids: 7036207533
[2026-03-05 07:36:19] 2026-03-05 06:36:19,102 [wrapper] cleanup supervisor_pilot  129868 3526611
[2026-03-05 07:36:19] 2026-03-05 06:36:19,105 [wrapper] Test setup, not cleaning
[2026-03-05 07:36:19] 2026-03-05 06:36:19,108 [wrapper] apfmon messages muted
[2026-03-05 07:36:19] 2026-03-05 06:36:19,110 [wrapper] ==== wrapper stdout END ====
[2026-03-05 07:36:19] 2026-03-05 06:36:19,113 [wrapper] ==== wrapper stderr END ====
[2026-03-05 07:36:19]  *** Error codes and diagnostics ***
[2026-03-05 07:36:19]     "exeErrorCode": 0,
[2026-03-05 07:36:19]     "exeErrorDiag": "",
[2026-03-05 07:36:19]     "pilotErrorCode": 0,
[2026-03-05 07:36:19]     "pilotErrorDiag": "",
[2026-03-05 07:36:19]  *** Listing of results directory ***
[2026-03-05 07:36:19] total 487548
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-05 07:36:19] -rwx------. 1 boinc boinc     36322 Mar  3 06:02 runpilot2-wrapper.sh
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc      5111 Mar  3 06:03 queuedata.json
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc       100 Mar  5 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 07:36:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 05:59 run_atlas
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc       105 Mar  5 05:59 job.xml
[2026-03-05 07:36:19] -rw-r--r--. 2 boinc boinc 279676635 Mar  5 05:59 EVNT.48220117._000180.pool.root.1
[2026-03-05 07:36:19] drwxrwx--x. 2 boinc boinc      4096 Mar  5 05:59 shared
[2026-03-05 07:36:19] -rw-r--r--. 2 boinc boinc    597969 Mar  5 05:59 input.tar.gz
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc      6706 Mar  5 05:59 init_data.xml
[2026-03-05 07:36:19] -rw-r--r--. 2 boinc boinc     15845 Mar  5 05:59 start_atlas.sh
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc         0 Mar  5 05:59 boinc_lockfile
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc      2572 Mar  5 05:59 pandaJob.out
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc    997749 Mar  5 05:59 agis_schedconf.cvmfs.json
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc   1521291 Mar  5 05:59 agis_ddmendpoints.agis.ALL.json
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc       444 Mar  5 06:00 workernode_map.json
[2026-03-05 07:36:19] drwx------. 5 boinc boinc      4096 Mar  5 06:00 pilot3
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc 213398374 Mar  5 07:34 HITS.48838447._004386.pool.root.1
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc       529 Mar  5 07:34 boinc_task_state.xml
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc      1043 Mar  5 07:35 memory_monitor_summary.json
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc    286576 Mar  5 07:35 log.48838447._004386.job.log.tgz.1
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc      6352 Mar  5 07:35 heartbeat.json
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc      8192 Mar  5 07:36 boinc_mmap_file
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc        27 Mar  5 07:36 wrapper_checkpoint.txt
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc        95 Mar  5 07:36 pilot_heartbeat.json
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc      5192 Mar  5 07:36 pilotlog.txt
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc    829925 Mar  5 07:36 log.48838447._004386.job.log.1
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc       357 Mar  5 07:36 output.list
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc       620 Mar  5 07:36 runtime_log
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc   1136640 Mar  5 07:36 result.tar.gz
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc      9204 Mar  5 07:36 runtime_log.err
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc       663 Mar  5 07:36 ZzvKDm54WH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4sFLDmawa9tm.diag
[2026-03-05 07:36:19] -rw-r--r--. 1 boinc boinc     21612 Mar  5 07:36 stderr.txt
[2026-03-05 07:36:19] HITS file was successfully produced:
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc 213398374 Mar  5 07:34 shared/HITS.pool.root.1
[2026-03-05 07:36:19]  *** Contents of shared directory: ***
[2026-03-05 07:36:19] total 483244
[2026-03-05 07:36:19] -rw-r--r--. 2 boinc boinc 279676635 Mar  5 05:59 ATLAS.root_0
[2026-03-05 07:36:19] -rw-r--r--. 2 boinc boinc    597969 Mar  5 05:59 input.tar.gz
[2026-03-05 07:36:19] -rw-r--r--. 2 boinc boinc     15845 Mar  5 05:59 start_atlas.sh
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc 213398374 Mar  5 07:34 HITS.pool.root.1
[2026-03-05 07:36:19] -rw-------. 1 boinc boinc   1136640 Mar  5 07:36 result.tar.gz
07:36:20 (3522031): run_atlas exited; CPU time 22122.923944
07:36:20 (3522031): called boinc_finish(0)

</stderr_txt>
]]>

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