Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:55 (1976288): wrapper (7.7.26015): starting
00:18:55 (1976288): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 00:18:55] Arguments: --nthreads 8
[2026-03-03 00:18:55] Threads: 8
[2026-03-03 00:18:55] Checking for CVMFS
[2026-03-03 00:18:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:18:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:18:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:18:59] 2.13.3.0 4389 166207 351732 156834 0 23 26155541 32935936 22983 16776704 0 715587281 99.687 573324124 33148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-03 00:18:59] CVMFS is ok
[2026-03-03 00:19:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:19:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:19:00] Further information can be found at the LHC@home message board.
[2026-03-03 00:19:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:19:00] Checking for apptainer binary...
[2026-03-03 00:19:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:19:00] Running /usr/bin/apptainer --version
[2026-03-03 00:19:00] apptainer version 1.4.5-2.el9
[2026-03-03 00:19:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:19:01] c-8-24.aglt2.org
[2026-03-03 00:19:01] apptainer works
[2026-03-03 00:19:01] Set ATHENA_PROC_NUMBER=8
[2026-03-03 00:19:01] Set ATHENA_CORE_NUMBER=8
[2026-03-03 00:19:01] Starting ATLAS job with PandaID=7036169866
[2026-03-03 00:19:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:11 (1976288): BOINC client no longer exists - exiting
00:20:11 (1976288): timer handler: client dead, exiting
00:30:06 (2005165): wrapper (7.7.26015): starting
00:30:06 (2005165): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 00:30:07] Arguments: --nthreads 8
[2026-03-03 00:30:07] Threads: 8
[2026-03-03 00:30:07] This job has been restarted, cleaning up previous attempt
[2026-03-03 00:30:07] Checking for CVMFS
[2026-03-03 00:30:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:30:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:30:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:30:10] 2.13.3.0 4389 166218 351564 156834 0 34 26199932 32935936 18950 16776704 0 715614547 99.687 573324126 33148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-03 00:30:10] CVMFS is ok
[2026-03-03 16:46:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 16:46:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 16:46:53] Further information can be found at the LHC@home message board.
[2026-03-03 16:46:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 16:46:53] Checking for apptainer binary...
[2026-03-03 16:46:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 16:46:53] Running /usr/bin/apptainer --version
[2026-03-03 16:46:53] apptainer version 1.4.5-2.el9
[2026-03-03 16:46:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 16:46:53] c-8-24.aglt2.org
[2026-03-03 16:46:53] apptainer works
[2026-03-03 16:46:53] Set ATHENA_PROC_NUMBER=8
[2026-03-03 16:46:53] Set ATHENA_CORE_NUMBER=8
[2026-03-03 16:46:53] Starting ATLAS job with PandaID=7036169866
[2026-03-03 16:46:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 19:37:40]  *** The last 200 lines of the pilot log: ***
[2026-03-03 19:37:40] 2026-03-04 00:36:45,254 | INFO     | log transfer has been attempted: DONE
[2026-03-03 19:37:40] 2026-03-04 00:36:45,254 | INFO     | job 7036169866 has finished - writing final server update
[2026-03-03 19:37:40] 2026-03-04 00:36:45,254 | INFO     | total number of processed events: 400 (read)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,271 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7036169866/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,272 | INFO     | extracted standard info from prmon json
[2026-03-03 19:37:40] 2026-03-04 00:36:45,272 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 19:37:40] 2026-03-04 00:36:45,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 19:37:40] 2026-03-04 00:36:45,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 19:37:40] 2026-03-04 00:36:45,273 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 19:37:40] 2026-03-04 00:36:45,280 | INFO     | fitting pss+swap vs Time
[2026-03-03 19:37:40] 2026-03-04 00:36:45,281 | INFO     | sum of square deviations: 1443966674.9341283
[2026-03-03 19:37:40] 2026-03-04 00:36:45,285 | INFO     | sum of deviations: -25205733752.29342
[2026-03-03 19:37:40] 2026-03-04 00:36:45,286 | INFO     | mean x: 1772579525.245509
[2026-03-03 19:37:40] 2026-03-04 00:36:45,286 | INFO     | mean y: 2575666.275449102
[2026-03-03 19:37:40] 2026-03-04 00:36:45,286 | INFO     | intersect: 30944541532.72674
[2026-03-03 19:37:40] 2026-03-04 00:36:45,286 | INFO     | chi2: 2.3511751580180995
[2026-03-03 19:37:40] 2026-03-04 00:36:45,287 | INFO     | sum of square deviations: 1318107052.1234572
[2026-03-03 19:37:40] 2026-03-04 00:36:45,292 | INFO     | sum of deviations: -13862666299.629616
[2026-03-03 19:37:40] 2026-03-04 00:36:45,292 | INFO     | mean x: 1772579372.7530863
[2026-03-03 19:37:40] 2026-03-04 00:36:45,292 | INFO     | mean y: 2589096.7592592593
[2026-03-03 19:37:40] 2026-03-04 00:36:45,292 | INFO     | intersect: 18644987143.637527
[2026-03-03 19:37:40] 2026-03-04 00:36:45,293 | INFO     | chi2: 1.674872913527961
[2026-03-03 19:37:40] 2026-03-04 00:36:45,293 | INFO     | current chi2=1.674872913527961 (change=28.76443476292175 %)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,293 | INFO     | sum of square deviations: 1199782454.2929895
[2026-03-03 19:37:40] 2026-03-04 00:36:45,294 | INFO     | sum of deviations: -13238505962.452232
[2026-03-03 19:37:40] 2026-03-04 00:36:45,294 | INFO     | mean x: 1772579220.2611465
[2026-03-03 19:37:40] 2026-03-04 00:36:45,294 | INFO     | mean y: 2589901.4012738853
[2026-03-03 19:37:40] 2026-03-04 00:36:45,295 | INFO     | intersect: 19561386158.489723
[2026-03-03 19:37:40] 2026-03-04 00:36:45,295 | INFO     | chi2: 1.6724133806618406
[2026-03-03 19:37:40] 2026-03-04 00:36:45,295 | INFO     | current chi2=1.6724133806618406 (change=0.1468489248500387 %)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,295 | INFO     | right removable region: 156
[2026-03-03 19:37:40] 2026-03-04 00:36:45,300 | INFO     | sum of square deviations: 1318082042.1234572
[2026-03-03 19:37:40] 2026-03-04 00:36:45,301 | INFO     | sum of deviations: -48095992979.790115
[2026-03-03 19:37:40] 2026-03-04 00:36:45,301 | INFO     | mean x: 1772579677.7530863
[2026-03-03 19:37:40] 2026-03-04 00:36:45,301 | INFO     | mean y: 2602945.5802469137
[2026-03-03 19:37:40] 2026-03-04 00:36:45,301 | INFO     | intersect: 64682931644.98743
[2026-03-03 19:37:40] 2026-03-04 00:36:45,301 | INFO     | chi2: 0.9929614995960021
[2026-03-03 19:37:40] 2026-03-04 00:36:45,302 | INFO     | current chi2=0.9929614995960021 (change=57.76743828677531 %)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,302 | INFO     | sum of square deviations: 1199752075.312099
[2026-03-03 19:37:40] 2026-03-04 00:36:45,303 | INFO     | sum of deviations: -42041116286.64969
[2026-03-03 19:37:40] 2026-03-04 00:36:45,303 | INFO     | mean x: 1772579830.2484076
[2026-03-03 19:37:40] 2026-03-04 00:36:45,303 | INFO     | mean y: 2595086.4012738853
[2026-03-03 19:37:40] 2026-03-04 00:36:45,303 | INFO     | intersect: 62116457028.634125
[2026-03-03 19:37:40] 2026-03-04 00:36:45,305 | INFO     | chi2: 0.9761984371876988
[2026-03-03 19:37:40] 2026-03-04 00:36:45,305 | INFO     | current chi2=0.9761984371876988 (change=1.6881885566684633 %)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,305 | INFO     | left removable region: 20
[2026-03-03 19:37:40] 2026-03-04 00:36:45,305 | INFO     | sum of square deviations: 779888815.0294125
[2026-03-03 19:37:40] 2026-03-04 00:36:45,306 | INFO     | sum of deviations: -14124801456.455889
[2026-03-03 19:37:40] 2026-03-04 00:36:45,306 | INFO     | mean x: 1772579799.6911764
[2026-03-03 19:37:40] 2026-03-04 00:36:45,306 | INFO     | mean y: 2586327.536764706
[2026-03-03 19:37:40] 2026-03-04 00:36:45,306 | INFO     | intersect: 32106313492.053112
[2026-03-03 19:37:40] 2026-03-04 00:36:45,307 | INFO     | chi2: 0.18220969100692178
[2026-03-03 19:37:40] 2026-03-04 00:36:45,307 | INFO     | current memory leak: -18.11 B/s (using 136 data points, chi2=0.18)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | could have reported an average CPU frequency of 2620 MHz (9 samples)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | ..............................
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | . Timing measurements:
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | . get job = 0 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | . initial setup = 10 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | . payload setup = 7 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | . stage-in = 0 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,308 | INFO     | . payload execution = 10140 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,316 | INFO     | . stage-out = 1 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,316 | INFO     | . log creation = 0 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,316 | INFO     | ..............................
[2026-03-03 19:37:40] 2026-03-04 00:36:45,369 | INFO     | time since job start (10169s) is within the limit (349056.0s)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,451 | INFO     | 
[2026-03-03 19:37:40] 2026-03-04 00:36:45,451 | INFO     | job summary report
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | --------------------------------------------------
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | PanDA job id: 7036169866
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | task id: 48838581
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | errors: (none)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | pilot state: finished 
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | transexitcode: 0
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | exeerrorcode: 0
[2026-03-03 19:37:40] 2026-03-04 00:36:45,452 | INFO     | exeerrordiag: 
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | exitcode: 0
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | exitmsg: OK
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | cpuconsumptiontime: 56811 s
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | nevents: 400
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | neventsw: 0
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | pid: 1104527
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | pgrp: 1104527
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | corecount: 8
[2026-03-03 19:37:40] 2026-03-04 00:36:45,453 | INFO     | event service: False
[2026-03-03 19:37:40] 2026-03-04 00:36:45,454 | INFO     | sizes: {0: 2286610, 1: 2287127, 12: 2287127, 10151: 2316025, 10152: 2316024, 10154: 2325078, 10157: 2325520}
[2026-03-03 19:37:40] 2026-03-04 00:36:45,454 | INFO     | --------------------------------------------------
[2026-03-03 19:37:40] 2026-03-04 00:36:45,454 | INFO     | 
[2026-03-03 19:37:40] 2026-03-04 00:36:45,454 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-03 19:37:40] 2026-03-04 00:36:45,480 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,480 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,480 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,480 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,482 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,482 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 19:37:40] 2026-03-04 00:36:45,482 | INFO     | job 7036169866 has completed (purged errors)
[2026-03-03 19:37:40] 2026-03-04 00:36:45,482 | INFO     | overall cleanup function is called
[2026-03-03 19:37:40] 2026-03-04 00:36:46,491 | INFO     | --- collectZombieJob: --- 10, [1104527]
[2026-03-03 19:37:40] 2026-03-04 00:36:46,491 | INFO     | zombie collector waiting for pid 1104527
[2026-03-03 19:37:40] 2026-03-04 00:36:46,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 19:37:40] 2026-03-04 00:36:46,491 | INFO     | collected zombie processes
[2026-03-03 19:37:40] 2026-03-04 00:36:46,491 | INFO     | will attempt to kill all subprocesses of pid=1104527
[2026-03-03 19:37:40] 2026-03-04 00:36:46,894 | INFO     | process IDs to be killed: [1104527] (in reverse order)
[2026-03-03 19:37:40] 2026-03-04 00:36:47,004 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 19:37:40] 2026-03-04 00:36:47,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 19:37:40] 2026-03-04 00:36:47,018 | INFO     | did not find any defunct processes belonging to 1104527
[2026-03-03 19:37:40] 2026-03-04 00:36:47,032 | INFO     | did not find any defunct processes belonging to 1104527
[2026-03-03 19:37:40] 2026-03-04 00:36:47,032 | INFO     | ready for new job
[2026-03-03 19:37:40] 2026-03-04 00:36:47,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 19:37:40] 2026-03-04 00:36:47,034 | INFO     | **************************************
[2026-03-03 19:37:40] 2026-03-04 00:36:47,035 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 19:37:40] 2026-03-04 00:36:47,035 | INFO     | **************************************
[2026-03-03 19:37:40] 2026-03-04 00:36:47,035 | INFO     | 
[2026-03-03 19:37:40] 2026-03-04 00:36:47,036 | INFO     | architecture information:
[2026-03-03 19:37:40] 2026-03-04 00:36:47,037 | INFO     | executing command: cat /etc/os-release
[2026-03-03 19:37:40] 2026-03-04 00:36:47,171 | INFO     | cat /etc/os-release:
[2026-03-03 19:37:40] NAME="CentOS Linux"
[2026-03-03 19:37:40] VERSION="7 (Core)"
[2026-03-03 19:37:40] ID="centos"
[2026-03-03 19:37:40] ID_LIKE="rhel fedora"
[2026-03-03 19:37:40] VERSION_ID="7"
[2026-03-03 19:37:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 19:37:40] ANSI_COLOR="0;31"
[2026-03-03 19:37:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 19:37:40] HOME_URL="https://www.centos.org/"
[2026-03-03 19:37:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 19:37:40] 
[2026-03-03 19:37:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 19:37:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 19:37:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 19:37:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 19:37:40] 
[2026-03-03 19:37:40] 2026-03-04 00:36:47,171 | INFO     | **************************************
[2026-03-03 19:37:40] 2026-03-04 00:36:47,675 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-03 19:37:40] 2026-03-04 00:36:47,697 | INFO     | sufficient remaining disk space (74795974656 B)
[2026-03-03 19:37:40] 2026-03-04 00:36:47,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 19:37:40] 2026-03-04 00:36:47,698 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 19:37:40] 2026-03-04 00:36:47,698 | INFO     | update_server=False
[2026-03-03 19:37:40] 2026-03-04 00:36:47,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 19:37:40] 2026-03-04 00:36:47,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 19:37:40] 2026-03-04 00:36:47,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 19:37:40] 2026-03-04 00:36:47,886 | INFO     | all payload control threads have been joined
[2026-03-03 19:37:40] 2026-03-04 00:36:48,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:37:40] 2026-03-04 00:36:48,041 | INFO     | aborting loop
[2026-03-03 19:37:40] 2026-03-04 00:36:48,057 | INFO     | all job control threads have been joined
[2026-03-03 19:37:40] 2026-03-04 00:36:48,588 | INFO     | all data control threads have been joined
[2026-03-03 19:37:40] 2026-03-04 00:36:48,704 | INFO     | [job] retrieve thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:48,892 | INFO     | [payload] control thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,047 | INFO     | [job] job monitor thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,063 | INFO     | [job] control thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,291 | INFO     | [payload] validate_post thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,313 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,594 | INFO     | [data] control thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,630 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,754 | INFO     | [data] copytool_out thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:49,891 | INFO     | [payload] failed_post thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:50,026 | INFO     | [data] copytool_in thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:50,026 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:50,125 | INFO     | [job] validate thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:50,191 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:50,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:37:40] 2026-03-04 00:36:51,487 | INFO     | [job] queue monitor thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:36:51,706 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 19:37:40] 2026-03-04 00:37:19,053 | INFO     | PID=1099326 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 19:37:40] 2026-03-04 00:37:19,053 | INFO     | .. there are 26 such processes running
[2026-03-03 19:37:40] 2026-03-04 00:37:19,054 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 19:37:40] 2026-03-04 00:37:19,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 19:37:40] 2026-03-04 00:37:19,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 19:37:40] 2026-03-04 00:37:33,604 | INFO     | [monitor] cgroup control has ended
[2026-03-03 19:37:40] 2026-03-04 00:37:34,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572637890368)>', '<ExcThread(monitor, started 140572283082496)>']
[2026-03-03 19:37:40] 2026-03-04 00:37:35,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 19:37:40] 2026-03-04 00:37:35,158 | INFO     | [monitor] control thread has ended
[2026-03-03 19:37:40] 2026-03-04 00:37:39,574 | INFO     | all workflow threads have been joined
[2026-03-03 19:37:40] 2026-03-04 00:37:39,574 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 19:37:40] 2026-03-04 00:37:39,577 | INFO     | traces error code: 0
[2026-03-03 19:37:40] 2026-03-04 00:37:39,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 19:37:40] 2026-03-04 00:37:39,818 [wrapper] ==== pilot stdout END ====
[2026-03-03 19:37:40] 2026-03-04 00:37:39,820 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 19:37:40] 2026-03-04 00:37:39,823 [wrapper] pilotpid: 1099326
[2026-03-03 19:37:40] 2026-03-04 00:37:39,825 [wrapper] Pilot exit status: 0
[2026-03-03 19:37:40] 2026-03-04 00:37:39,837 [wrapper] pandaids: 7036169866
[2026-03-03 19:37:40] 2026-03-04 00:37:39,909 [wrapper] cleanup supervisor_pilot 1512364 1099327
[2026-03-03 19:37:40] 2026-03-04 00:37:39,915 [wrapper] Test setup, not cleaning
[2026-03-03 19:37:40] 2026-03-04 00:37:39,918 [wrapper] apfmon messages muted
[2026-03-03 19:37:40] 2026-03-04 00:37:39,921 [wrapper] ==== wrapper stdout END ====
[2026-03-03 19:37:40] 2026-03-04 00:37:39,924 [wrapper] ==== wrapper stderr END ====
[2026-03-03 19:37:40]  *** Error codes and diagnostics ***
[2026-03-03 19:37:40]     "exeErrorCode": 0,
[2026-03-03 19:37:40]     "exeErrorDiag": "",
[2026-03-03 19:37:40]     "pilotErrorCode": 0,
[2026-03-03 19:37:40]     "pilotErrorDiag": "",
[2026-03-03 19:37:40]  *** Listing of results directory ***
[2026-03-03 19:37:40] total 783740
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 19:05 pilot3.tar.gz
[2026-03-03 19:37:40] -rwx------. 1 boincer umatlas     36322 Mar  2 19:05 runpilot2-wrapper.sh
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 19:07 queuedata.json
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas       100 Mar  3 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 19:37:40] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 00:18 run_atlas
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas       105 Mar  3 00:18 job.xml
[2026-03-03 19:37:40] -rw-r--r--. 3 boincer umatlas 286803955 Mar  3 00:18 EVNT.48220205._000203.pool.root.1
[2026-03-03 19:37:40] -rw-r--r--. 3 boincer umatlas 286803955 Mar  3 00:18 ATLAS.root_0
[2026-03-03 19:37:40] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 00:18 start_atlas.sh
[2026-03-03 19:37:40] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 00:18 shared
[2026-03-03 19:37:40] -rw-r--r--. 2 boincer umatlas    597973 Mar  3 00:18 input.tar.gz
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas         0 Mar  3 00:18 boinc_lockfile
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas      2588 Mar  3 16:46 pandaJob.out
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas        57 Mar  3 16:46 setup.sh.local
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas    998484 Mar  3 16:47 agis_schedconf.cvmfs.json
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas   1516092 Mar  3 16:47 agis_ddmendpoints.agis.ALL.json
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas       433 Mar  3 16:47 workernode_map.json
[2026-03-03 19:37:40] drwx------. 5 boincer umatlas      4096 Mar  3 16:47 pilot3
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas 221435489 Mar  3 19:35 HITS.48838581._004855.pool.root.1
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas       531 Mar  3 19:35 boinc_task_state.xml
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas      6659 Mar  3 19:36 init_data.xml
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas      1050 Mar  3 19:36 memory_monitor_summary.json
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas    412846 Mar  3 19:36 log.48838581._004855.job.log.tgz.1
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas      6399 Mar  3 19:36 heartbeat.json
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas        95 Mar  3 19:37 pilot_heartbeat.json
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 19:37 boinc_mmap_file
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas        28 Mar  3 19:37 wrapper_checkpoint.txt
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas      4820 Mar  3 19:37 pilotlog.txt
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas   1366611 Mar  3 19:37 log.48838581._004855.job.log.1
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas       357 Mar  3 19:37 output.list
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas       620 Mar  3 19:37 runtime_log
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas   1802240 Mar  3 19:37 result.tar.gz
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas      9417 Mar  3 19:37 runtime_log.err
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas       782 Mar  3 19:37 nIQKDmMRSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQAFLDmRPL4Em.diag
[2026-03-03 19:37:40] -rw-r--r--. 1 boincer umatlas     23408 Mar  3 19:37 stderr.txt
[2026-03-03 19:37:40] HITS file was successfully produced:
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas 221435489 Mar  3 19:35 shared/HITS.pool.root.1
[2026-03-03 19:37:40]  *** Contents of shared directory: ***
[2026-03-03 19:37:40] total 498700
[2026-03-03 19:37:40] -rw-r--r--. 3 boincer umatlas 286803955 Mar  3 00:18 ATLAS.root_0
[2026-03-03 19:37:40] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 00:18 start_atlas.sh
[2026-03-03 19:37:40] -rw-r--r--. 2 boincer umatlas    597973 Mar  3 00:18 input.tar.gz
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas 221435489 Mar  3 19:35 HITS.pool.root.1
[2026-03-03 19:37:40] -rw-------. 1 boincer umatlas   1802240 Mar  3 19:37 result.tar.gz
19:37:41 (2005165): run_atlas exited; CPU time 57225.238202
19:37:41 (2005165): called boinc_finish(0)

</stderr_txt>
]]>

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