Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:36 (1974897): wrapper (7.7.26015): starting
00:18:36 (1974897): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 00:18:36] Arguments: --nthreads 8
[2026-03-03 00:18:36] Threads: 8
[2026-03-03 00:18:36] Checking for CVMFS
[2026-03-03 00:18:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:18:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:18:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:18:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:18:40] 2.13.3.0 4389 166207 351732 156834 0 22 26155541 32935936 22950 16776704 0 715585349 99.687 573324124 33148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-03 00:18:40] CVMFS is ok
[2026-03-03 00:18:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:18:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:18:40] Further information can be found at the LHC@home message board.
[2026-03-03 00:18:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:18:40] Checking for apptainer binary...
[2026-03-03 00:18:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:18:40] Running /usr/bin/apptainer --version
[2026-03-03 00:18:40] apptainer version 1.4.5-2.el9
[2026-03-03 00:18:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:18:42] c-8-24.aglt2.org
[2026-03-03 00:18:42] apptainer works
[2026-03-03 00:18:43] Set ATHENA_PROC_NUMBER=8
[2026-03-03 00:18:43] Set ATHENA_CORE_NUMBER=8
[2026-03-03 00:18:43] Starting ATLAS job with PandaID=7036160690
[2026-03-03 00:18:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:30:06 (2005160): wrapper (7.7.26015): starting
00:30:06 (2005160): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 00:30:07] Arguments: --nthreads 8
[2026-03-03 00:30:07] Threads: 8
[2026-03-03 00:30:07] This job has been restarted, cleaning up previous attempt
[2026-03-03 00:30:07] Checking for CVMFS
[2026-03-03 00:30:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:30:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:30:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:30:10] 2.13.3.0 4389 166218 351564 156834 0 34 26199932 32935936 18950 16776704 0 715614547 99.687 573324126 33148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-03 00:30:10] CVMFS is ok
[2026-03-03 00:30:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:30:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:30:10] Further information can be found at the LHC@home message board.
[2026-03-03 00:30:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:30:10] Checking for apptainer binary...
[2026-03-03 00:30:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:30:10] Running /usr/bin/apptainer --version
[2026-03-03 00:30:10] apptainer version 1.4.5-2.el9
[2026-03-03 00:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:30:11] c-8-24.aglt2.org
[2026-03-03 00:30:11] apptainer works
[2026-03-03 00:30:11] Set ATHENA_PROC_NUMBER=8
[2026-03-03 00:30:11] Set ATHENA_CORE_NUMBER=8
[2026-03-03 00:30:11] Starting ATLAS job with PandaID=7036160690
[2026-03-03 00:30:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 16:46:28]  *** The last 200 lines of the pilot log: ***
[2026-03-03 16:46:28] 2026-03-03 21:45:28,677 | INFO     | job 7036160690 has state=finished
[2026-03-03 16:46:28] 2026-03-03 21:45:28,677 | INFO     | preparing for final server update for job 7036160690 in state='finished'
[2026-03-03 16:46:28] 2026-03-03 21:45:28,678 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7036160690/jobReport.json
[2026-03-03 16:46:28] 2026-03-03 21:45:28,680 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-03 16:46:28] 2026-03-03 21:45:28,681 | INFO     | this job has now completed (state=finished)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,681 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,681 | INFO     | log transfer has been attempted: DONE
[2026-03-03 16:46:28] 2026-03-03 21:45:28,681 | INFO     | job 7036160690 has finished - writing final server update
[2026-03-03 16:46:28] 2026-03-03 21:45:28,682 | INFO     | total number of processed events: 400 (read)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,688 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7036160690/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,689 | INFO     | extracted standard info from prmon json
[2026-03-03 16:46:28] 2026-03-03 21:45:28,689 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 16:46:28] 2026-03-03 21:45:28,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 16:46:28] 2026-03-03 21:45:28,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 16:46:28] 2026-03-03 21:45:28,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 16:46:28] 2026-03-03 21:45:28,708 | INFO     | fitting pss+swap vs Time
[2026-03-03 16:46:28] 2026-03-03 21:45:28,709 | INFO     | sum of square deviations: 272626367415.22464
[2026-03-03 16:46:28] 2026-03-03 21:45:28,737 | INFO     | sum of deviations: 457186589618.341
[2026-03-03 16:46:28] 2026-03-03 21:45:28,737 | INFO     | mean x: 1772545127.4331942
[2026-03-03 16:46:28] 2026-03-03 21:45:28,737 | INFO     | mean y: 2545970.052192067
[2026-03-03 16:46:28] 2026-03-03 21:45:28,737 | INFO     | intersect: -2969961309.5592895
[2026-03-03 16:46:28] 2026-03-03 21:45:28,739 | INFO     | chi2: 3.153844989503169
[2026-03-03 16:46:28] 2026-03-03 21:45:28,740 | INFO     | sum of square deviations: 268380074360.2225
[2026-03-03 16:46:28] 2026-03-03 21:45:28,768 | INFO     | sum of deviations: 513991579617.32306
[2026-03-03 16:46:28] 2026-03-03 21:45:28,768 | INFO     | mean x: 1772544974.9370408
[2026-03-03 16:46:28] 2026-03-03 21:45:28,768 | INFO     | mean y: 2548000.738719832
[2026-03-03 16:46:28] 2026-03-03 21:45:28,768 | INFO     | intersect: -3392164493.407869
[2026-03-03 16:46:28] 2026-03-03 21:45:28,770 | INFO     | chi2: 2.47116075246825
[2026-03-03 16:46:28] 2026-03-03 21:45:28,770 | INFO     | current chi2=2.47116075246825 (change=21.64609355586824 %)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,770 | INFO     | right removable region: 952
[2026-03-03 16:46:28] 2026-03-03 21:45:28,771 | INFO     | sum of square deviations: 268379587213.3473
[2026-03-03 16:46:28] 2026-03-03 21:45:28,797 | INFO     | sum of deviations: 227662757315.9119
[2026-03-03 16:46:28] 2026-03-03 21:45:28,798 | INFO     | mean x: 1772545279.9380903
[2026-03-03 16:46:28] 2026-03-03 21:45:28,798 | INFO     | mean y: 2554202.4900314794
[2026-03-03 16:46:28] 2026-03-03 21:45:28,798 | INFO     | intersect: -1501071874.6199837
[2026-03-03 16:46:28] 2026-03-03 21:45:28,799 | INFO     | chi2: 0.9273153577606802
[2026-03-03 16:46:28] 2026-03-03 21:45:28,799 | INFO     | current chi2=0.9273153577606802 (change=70.59730706971867 %)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,801 | INFO     | sum of square deviations: 264177191557.80948
[2026-03-03 16:46:28] 2026-03-03 21:45:28,827 | INFO     | sum of deviations: 176033333480.9651
[2026-03-03 16:46:28] 2026-03-03 21:45:28,827 | INFO     | mean x: 1772545432.4419832
[2026-03-03 16:46:28] 2026-03-03 21:45:28,827 | INFO     | mean y: 2556073.6993670887
[2026-03-03 16:46:28] 2026-03-03 21:45:28,827 | INFO     | intersect: -1178571938.8260472
[2026-03-03 16:46:28] 2026-03-03 21:45:28,829 | INFO     | chi2: 0.8210293602084131
[2026-03-03 16:46:28] 2026-03-03 21:45:28,829 | INFO     | current chi2=0.8210293602084131 (change=11.461688481999364 %)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,829 | INFO     | left removable region: 20
[2026-03-03 16:46:28] 2026-03-03 21:45:28,830 | INFO     | sum of square deviations: 251025445452.5299
[2026-03-03 16:46:28] 2026-03-03 21:45:28,861 | INFO     | sum of deviations: 183477772975.70407
[2026-03-03 16:46:28] 2026-03-03 21:45:28,861 | INFO     | mean x: 1772545554.4484978
[2026-03-03 16:46:28] 2026-03-03 21:45:28,862 | INFO     | mean y: 2559995.931330472
[2026-03-03 16:46:28] 2026-03-03 21:45:28,863 | INFO     | intersect: -1293016674.5608096
[2026-03-03 16:46:28] 2026-03-03 21:45:28,864 | INFO     | chi2: 0.08802869608226939
[2026-03-03 16:46:28] 2026-03-03 21:45:28,865 | INFO     | current memory leak: 0.73 B/s (using 932 data points, chi2=0.09)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,866 | INFO     | could have reported an average CPU frequency of 2600 MHz (36 samples)
[2026-03-03 16:46:28] 2026-03-03 21:45:28,866 | INFO     | ..............................
[2026-03-03 16:46:28] 2026-03-03 21:45:28,866 | INFO     | . Timing measurements:
[2026-03-03 16:46:28] 2026-03-03 21:45:28,866 | INFO     | . get job = 0 s
[2026-03-03 16:46:28] 2026-03-03 21:45:28,866 | INFO     | . initial setup = 26 s
[2026-03-03 16:46:28] 2026-03-03 21:45:28,866 | INFO     | . payload setup = 29 s
[2026-03-03 16:46:28] 2026-03-03 21:45:28,867 | INFO     | . stage-in = 0 s
[2026-03-03 16:46:28] 2026-03-03 21:45:28,867 | INFO     | . payload execution = 58402 s
[2026-03-03 16:46:28] 2026-03-03 21:45:28,867 | INFO     | . stage-out = 2 s
[2026-03-03 16:46:28] 2026-03-03 21:45:28,867 | INFO     | . log creation = 0 s
[2026-03-03 16:46:28] 2026-03-03 21:45:28,867 | INFO     | ..............................
[2026-03-03 16:46:28] 2026-03-03 21:45:29,265 | INFO     | 
[2026-03-03 16:46:28] 2026-03-03 21:45:29,267 | INFO     | job summary report
[2026-03-03 16:46:28] 2026-03-03 21:45:29,267 | INFO     | --------------------------------------------------
[2026-03-03 16:46:28] 2026-03-03 21:45:29,267 | INFO     | PanDA job id: 7036160690
[2026-03-03 16:46:28] 2026-03-03 21:45:29,267 | INFO     | task id: 48852191
[2026-03-03 16:46:28] 2026-03-03 21:45:29,267 | INFO     | errors: (none)
[2026-03-03 16:46:28] 2026-03-03 21:45:29,267 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | pilot state: finished 
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | transexitcode: 0
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | exeerrorcode: 0
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | exeerrordiag: 
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | exitcode: 0
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | exitmsg: OK
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | cpuconsumptiontime: 97265 s
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | nevents: 400
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | neventsw: 0
[2026-03-03 16:46:28] 2026-03-03 21:45:29,268 | INFO     | pid: 2022741
[2026-03-03 16:46:28] 2026-03-03 21:45:29,269 | INFO     | pgrp: 2022741
[2026-03-03 16:46:28] 2026-03-03 21:45:29,269 | INFO     | corecount: 8
[2026-03-03 16:46:28] 2026-03-03 21:45:29,269 | INFO     | event service: False
[2026-03-03 16:46:28] 2026-03-03 21:45:29,269 | INFO     | sizes: {0: 2281266, 1: 2281867, 2: 2282412, 3: 2282440, 58435: 2333098, 58438: 2347079, 58440: 2347217}
[2026-03-03 16:46:28] 2026-03-03 21:45:29,269 | INFO     | --------------------------------------------------
[2026-03-03 16:46:28] 2026-03-03 21:45:29,269 | INFO     | 
[2026-03-03 16:46:28] 2026-03-03 21:45:29,269 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-03 16:46:28] 2026-03-03 21:45:29,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,311 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,311 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,313 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 16:46:28] 2026-03-03 21:45:29,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,313 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 16:46:28] 2026-03-03 21:45:29,314 | INFO     | job 7036160690 has completed (purged errors)
[2026-03-03 16:46:28] 2026-03-03 21:45:29,314 | INFO     | overall cleanup function is called
[2026-03-03 16:46:28] 2026-03-03 21:45:30,324 | INFO     | --- collectZombieJob: --- 10, [2022741]
[2026-03-03 16:46:28] 2026-03-03 21:45:30,324 | INFO     | zombie collector waiting for pid 2022741
[2026-03-03 16:46:28] 2026-03-03 21:45:30,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 16:46:28] 2026-03-03 21:45:30,324 | INFO     | collected zombie processes
[2026-03-03 16:46:28] 2026-03-03 21:45:30,324 | INFO     | will attempt to kill all subprocesses of pid=2022741
[2026-03-03 16:46:28] 2026-03-03 21:45:30,856 | INFO     | process IDs to be killed: [2022741] (in reverse order)
[2026-03-03 16:46:28] 2026-03-03 21:45:31,018 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 16:46:28] 2026-03-03 21:45:31,018 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 16:46:28] 2026-03-03 21:45:31,034 | INFO     | did not find any defunct processes belonging to 2022741
[2026-03-03 16:46:28] 2026-03-03 21:45:31,047 | INFO     | did not find any defunct processes belonging to 2022741
[2026-03-03 16:46:28] 2026-03-03 21:45:31,048 | INFO     | ready for new job
[2026-03-03 16:46:28] 2026-03-03 21:45:31,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 16:46:28] 2026-03-03 21:45:31,050 | INFO     | **************************************
[2026-03-03 16:46:28] 2026-03-03 21:45:31,050 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 16:46:28] 2026-03-03 21:45:31,051 | INFO     | **************************************
[2026-03-03 16:46:28] 2026-03-03 21:45:31,051 | INFO     | 
[2026-03-03 16:46:28] 2026-03-03 21:45:31,052 | INFO     | architecture information:
[2026-03-03 16:46:28] 2026-03-03 21:45:31,052 | INFO     | executing command: cat /etc/os-release
[2026-03-03 16:46:28] 2026-03-03 21:45:31,068 | INFO     | cat /etc/os-release:
[2026-03-03 16:46:28] NAME="CentOS Linux"
[2026-03-03 16:46:28] VERSION="7 (Core)"
[2026-03-03 16:46:28] ID="centos"
[2026-03-03 16:46:28] ID_LIKE="rhel fedora"
[2026-03-03 16:46:28] VERSION_ID="7"
[2026-03-03 16:46:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 16:46:28] ANSI_COLOR="0;31"
[2026-03-03 16:46:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 16:46:28] HOME_URL="https://www.centos.org/"
[2026-03-03 16:46:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 16:46:28] 
[2026-03-03 16:46:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 16:46:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 16:46:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 16:46:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 16:46:28] 
[2026-03-03 16:46:28] 2026-03-03 21:45:31,069 | INFO     | **************************************
[2026-03-03 16:46:28] 2026-03-03 21:45:31,571 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-03 16:46:28] 2026-03-03 21:45:31,590 | INFO     | sufficient remaining disk space (75247910912 B)
[2026-03-03 16:46:28] 2026-03-03 21:45:31,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 16:46:28] 2026-03-03 21:45:31,591 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 16:46:28] 2026-03-03 21:45:31,591 | INFO     | update_server=False
[2026-03-03 16:46:28] 2026-03-03 21:45:31,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 16:46:28] 2026-03-03 21:45:31,649 | INFO     | all job control threads have been joined
[2026-03-03 16:46:28] 2026-03-03 21:45:31,816 | INFO     | all data control threads have been joined
[2026-03-03 16:46:28] 2026-03-03 21:45:32,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 16:46:28] 2026-03-03 21:45:32,472 | INFO     | aborting loop
[2026-03-03 16:46:28] 2026-03-03 21:45:32,597 | INFO     | [job] retrieve thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:32,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 16:46:28] 2026-03-03 21:45:32,655 | INFO     | [job] control thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:32,821 | INFO     | [data] control thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:32,947 | INFO     | all payload control threads have been joined
[2026-03-03 16:46:28] 2026-03-03 21:45:32,983 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,088 | INFO     | [data] copytool_in thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 16:46:28] 2026-03-03 21:45:33,478 | INFO     | [job] job monitor thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,495 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,574 | INFO     | [payload] validate_post thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,590 | INFO     | [job] validate thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,656 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,806 | INFO     | [payload] failed_post thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,952 | INFO     | [payload] control thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:33,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 16:46:28] 2026-03-03 21:45:34,643 | INFO     | [data] copytool_out thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:34,999 | INFO     | [job] queue monitor thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:37,265 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:45:42,270 | INFO     | job.realtimelogging is not enabled
[2026-03-03 16:46:28] 2026-03-03 21:45:43,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 16:46:28] 2026-03-03 21:46:01,939 | INFO     | PID=2014088 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 16:46:28] 2026-03-03 21:46:01,939 | INFO     | .. there are 31 such processes running
[2026-03-03 16:46:28] 2026-03-03 21:46:01,940 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 16:46:28] 2026-03-03 21:46:01,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 16:46:28] 2026-03-03 21:46:01,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 16:46:28] 2026-03-03 21:46:13,546 [wrapper] supervise_pilot (15 min periods counter: 66)
[2026-03-03 16:46:28] 2026-03-03 21:46:22,099 | INFO     | [monitor] cgroup control has ended
[2026-03-03 16:46:28] 2026-03-03 21:46:23,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985118357312)>', '<ExcThread(monitor, started 139984761763584)>']
[2026-03-03 16:46:28] 2026-03-03 21:46:24,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 16:46:28] 2026-03-03 21:46:24,083 | INFO     | [monitor] control thread has ended
[2026-03-03 16:46:28] 2026-03-03 21:46:28,269 | INFO     | all workflow threads have been joined
[2026-03-03 16:46:28] 2026-03-03 21:46:28,269 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 16:46:28] 2026-03-03 21:46:28,270 | INFO     | traces error code: 0
[2026-03-03 16:46:28] 2026-03-03 21:46:28,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 16:46:28] 2026-03-03 21:46:28,414 [wrapper] ==== pilot stdout END ====
[2026-03-03 16:46:28] 2026-03-03 21:46:28,417 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 16:46:28] 2026-03-03 21:46:28,420 [wrapper] pilotpid: 2014088
[2026-03-03 16:46:28] 2026-03-03 21:46:28,423 [wrapper] Pilot exit status: 0
[2026-03-03 16:46:28] 2026-03-03 21:46:28,436 [wrapper] pandaids: 7036160690
[2026-03-03 16:46:28] 2026-03-03 21:46:28,512 [wrapper] cleanup supervisor_pilot 1094357 2014089
[2026-03-03 16:46:28] 2026-03-03 21:46:28,516 [wrapper] Test setup, not cleaning
[2026-03-03 16:46:28] 2026-03-03 21:46:28,519 [wrapper] apfmon messages muted
[2026-03-03 16:46:28] 2026-03-03 21:46:28,522 [wrapper] ==== wrapper stdout END ====
[2026-03-03 16:46:28] 2026-03-03 21:46:28,524 [wrapper] ==== wrapper stderr END ====
[2026-03-03 16:46:28]  *** Error codes and diagnostics ***
[2026-03-03 16:46:28]     "exeErrorCode": 0,
[2026-03-03 16:46:28]     "exeErrorDiag": "",
[2026-03-03 16:46:28]     "pilotErrorCode": 0,
[2026-03-03 16:46:28]     "pilotErrorDiag": "",
[2026-03-03 16:46:28]  *** Listing of results directory ***
[2026-03-03 16:46:28] total 736668
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 19:02 queuedata.json
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 19:05 pilot3.tar.gz
[2026-03-03 16:46:28] -rwx------. 1 boincer umatlas     36322 Mar  2 19:05 runpilot2-wrapper.sh
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas       100 Mar  3 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 16:46:28] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 00:18 run_atlas
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas       105 Mar  3 00:18 job.xml
[2026-03-03 16:46:28] -rw-r--r--. 3 boincer umatlas 246637970 Mar  3 00:18 EVNT.48462041._000002.pool.root.1
[2026-03-03 16:46:28] -rw-r--r--. 3 boincer umatlas 246637970 Mar  3 00:18 ATLAS.root_0
[2026-03-03 16:46:28] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 00:18 start_atlas.sh
[2026-03-03 16:46:28] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 00:18 shared
[2026-03-03 16:46:28] -rw-r--r--. 2 boincer umatlas    597961 Mar  3 00:18 input.tar.gz
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas         0 Mar  3 00:18 boinc_lockfile
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas      2624 Mar  3 00:30 pandaJob.out
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas        57 Mar  3 00:30 setup.sh.local
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas    997730 Mar  3 00:30 agis_schedconf.cvmfs.json
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas       432 Mar  3 00:31 workernode_map.json
[2026-03-03 16:46:28] drwx------. 5 boincer umatlas      4096 Mar  3 00:31 pilot3
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas      6661 Mar  3 16:40 init_data.xml
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas 241905599 Mar  3 16:44 HITS.48852191._000036.pool.root.1
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas       532 Mar  3 16:44 boinc_task_state.xml
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas      1053 Mar  3 16:45 memory_monitor_summary.json
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas   1516092 Mar  3 16:45 agis_ddmendpoints.agis.ALL.json
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas    962430 Mar  3 16:45 log.48852191._000036.job.log.tgz.1
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas      6385 Mar  3 16:45 heartbeat.json
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas        95 Mar  3 16:46 pilot_heartbeat.json
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 16:46 boinc_mmap_file
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas      4892 Mar  3 16:46 pilotlog.txt
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas   6648446 Mar  3 16:46 log.48852191._000036.job.log.1
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas       357 Mar  3 16:46 output.list
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas       620 Mar  3 16:46 runtime_log
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas   7628800 Mar  3 16:46 result.tar.gz
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas      9417 Mar  3 16:46 runtime_log.err
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas       785 Mar  3 16:46 LlpKDmqRSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWEDLDmFr3Cmm.diag
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas        29 Mar  3 16:46 wrapper_checkpoint.txt
[2026-03-03 16:46:28] -rw-r--r--. 1 boincer umatlas     23432 Mar  3 16:46 stderr.txt
[2026-03-03 16:46:28] HITS file was successfully produced:
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas 241905599 Mar  3 16:44 shared/HITS.pool.root.1
[2026-03-03 16:46:28]  *** Contents of shared directory: ***
[2026-03-03 16:46:28] total 485156
[2026-03-03 16:46:28] -rw-r--r--. 3 boincer umatlas 246637970 Mar  3 00:18 ATLAS.root_0
[2026-03-03 16:46:28] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 00:18 start_atlas.sh
[2026-03-03 16:46:28] -rw-r--r--. 2 boincer umatlas    597961 Mar  3 00:18 input.tar.gz
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas 241905599 Mar  3 16:44 HITS.pool.root.1
[2026-03-03 16:46:28] -rw-------. 1 boincer umatlas   7628800 Mar  3 16:46 result.tar.gz
16:46:30 (2005160): run_atlas exited; CPU time 99954.691560
16:46:30 (2005160): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN