Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:17:09 (2348): wrapper (7.7.26015): starting
00:17:09 (2348): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 00:17:09] Arguments: --nthreads 12
[2026-03-03 00:17:09] Threads: 12
[2026-03-03 00:17:09] Checking for CVMFS
[2026-03-03 00:17:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:17:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:17:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:17:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:17:09] 2.11.2.0 723 256878 100028 156834 0 49 12476936 20275201 1 130560 0 103861493 99.919 14090569 35034 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 00:17:09] CVMFS is ok
[2026-03-03 00:17:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:17:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:17:09] Further information can be found at the LHC@home message board.
[2026-03-03 00:17:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:17:09] Checking for apptainer binary...
[2026-03-03 00:17:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:17:09] Running /usr/bin/apptainer --version
[2026-03-03 00:17:09] apptainer version 1.3.2-1.el7
[2026-03-03 00:17:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:17:11] c-205-1.aglt2.org
[2026-03-03 00:17:11] apptainer works
[2026-03-03 00:17:11] Set ATHENA_PROC_NUMBER=12
[2026-03-03 00:17:11] Set ATHENA_CORE_NUMBER=12
[2026-03-03 00:17:11] Starting ATLAS job with PandaID=7036134413
[2026-03-03 00:17:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 01:42:49]  *** The last 200 lines of the pilot log: ***
[2026-03-03 01:42:49]  domain=
[2026-03-03 01:42:49]  filesize=398617
[2026-03-03 01:42:49]  filetype=log
[2026-03-03 01:42:49]  guid=3baa2039-6f72-45f8-8391-3a76fc4b1db3
[2026-03-03 01:42:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 01:42:49]  is_altstaged=None
[2026-03-03 01:42:49]  is_tar=False
[2026-03-03 01:42:49]  lfn=log.48838581._004448.job.log.tgz.1
[2026-03-03 01:42:49]  mtime=0
[2026-03-03 01:42:49]  protocol_id=None
[2026-03-03 01:42:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 01:42:49]  replicas=None
[2026-03-03 01:42:49]  scope=mc23_13p6TeV
[2026-03-03 01:42:49]  status=None
[2026-03-03 01:42:49]  status_code=0
[2026-03-03 01:42:49]  storage_token=
[2026-03-03 01:42:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7036134413/log.48838581._004448.job.log.tgz.1
[2026-03-03 01:42:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/84/log.48838581._004448.job.log.tgz.1
[2026-03-03 01:42:49]  workdir=None
[2026-03-03 01:42:49] ]
[2026-03-03 01:42:49] 2026-03-03 06:42:15,271 | INFO     | transferring file log.48838581._004448.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7036134413/log.48838581._004448.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-03 01:42:49] 2026-03-03 06:42:15,271 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7036134413/log.48838581._004448.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838581._004448.job
[2026-03-03 01:42:49] 2026-03-03 06:42:15,295 | INFO     | adding to output.list: log.48838581._004448.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/84/log.48838581._004448.job.log.tg
[2026-03-03 01:42:49] 2026-03-03 06:42:15,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 01:42:49] 2026-03-03 06:42:15,296 | INFO     | summary of transferred files:
[2026-03-03 01:42:49] 2026-03-03 06:42:15,297 | INFO     |  -- lfn=log.48838581._004448.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 01:42:49] 2026-03-03 06:42:15,297 | INFO     | stage-out finished correctly
[2026-03-03 01:42:49] 2026-03-03 06:42:15,351 | INFO     | monitor loop #387: job 0:7036134413 is in state 'finished'
[2026-03-03 01:42:49] 2026-03-03 06:42:15,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 01:42:49] 2026-03-03 06:42:15,722 | INFO     | time since job start (5083s) is within the limit (349056.0s)
[2026-03-03 01:42:49] 2026-03-03 06:42:16,838 | INFO     | PID=6876 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-03 01:42:49] 2026-03-03 06:42:17,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 01:42:49] 2026-03-03 06:42:17,502 | INFO     | job 7036134413 has state=finished
[2026-03-03 01:42:49] 2026-03-03 06:42:17,502 | INFO     | preparing for final server update for job 7036134413 in state='finished'
[2026-03-03 01:42:49] 2026-03-03 06:42:17,502 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036134413/jobReport.json
[2026-03-03 01:42:49] 2026-03-03 06:42:17,506 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 01:42:49] 2026-03-03 06:42:17,506 | INFO     | this job has now completed (state=finished)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,506 | INFO     | log transfer has been attempted: DONE
[2026-03-03 01:42:49] 2026-03-03 06:42:17,506 | INFO     | job 7036134413 has finished - writing final server update
[2026-03-03 01:42:49] 2026-03-03 06:42:17,507 | INFO     | total number of processed events: 400 (read)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,508 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036134413/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,509 | INFO     | extracted standard info from prmon json
[2026-03-03 01:42:49] 2026-03-03 06:42:17,509 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 01:42:49] 2026-03-03 06:42:17,509 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 01:42:49] 2026-03-03 06:42:17,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 01:42:49] 2026-03-03 06:42:17,509 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 01:42:49] 2026-03-03 06:42:17,511 | INFO     | fitting pss+swap vs Time
[2026-03-03 01:42:49] 2026-03-03 06:42:17,511 | INFO     | sum of square deviations: 136095575.0
[2026-03-03 01:42:49] 2026-03-03 06:42:17,512 | INFO     | sum of deviations: -8625073040.0
[2026-03-03 01:42:49] 2026-03-03 06:42:17,512 | INFO     | mean x: 1772517668.5
[2026-03-03 01:42:49] 2026-03-03 06:42:17,512 | INFO     | mean y: 2903172.4736842103
[2026-03-03 01:42:49] 2026-03-03 06:42:17,512 | INFO     | intersect: 112336418464.96579
[2026-03-03 01:42:49] 2026-03-03 06:42:17,512 | INFO     | chi2: 0.1167387195175189
[2026-03-03 01:42:49] 2026-03-03 06:42:17,512 | INFO     | current memory leak: -63.38 B/s (using 76 data points, chi2=0.12)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,512 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | ..............................
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . Timing measurements:
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . get job = 0 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . initial setup = 7 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . payload setup = 7 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . stage-in = 0 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . payload execution = 5058 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . stage-out = 0 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,513 | INFO     | . log creation = 0 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,514 | INFO     | ..............................
[2026-03-03 01:42:49] 2026-03-03 06:42:17,590 | INFO     | 
[2026-03-03 01:42:49] 2026-03-03 06:42:17,590 | INFO     | job summary report
[2026-03-03 01:42:49] 2026-03-03 06:42:17,590 | INFO     | --------------------------------------------------
[2026-03-03 01:42:49] 2026-03-03 06:42:17,590 | INFO     | PanDA job id: 7036134413
[2026-03-03 01:42:49] 2026-03-03 06:42:17,590 | INFO     | task id: 48838581
[2026-03-03 01:42:49] 2026-03-03 06:42:17,590 | INFO     | errors: (none)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,590 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 01:42:49] 2026-03-03 06:42:17,591 | INFO     | pilot state: finished 
[2026-03-03 01:42:49] 2026-03-03 06:42:17,591 | INFO     | transexitcode: 0
[2026-03-03 01:42:49] 2026-03-03 06:42:17,591 | INFO     | exeerrorcode: 0
[2026-03-03 01:42:49] 2026-03-03 06:42:17,591 | INFO     | exeerrordiag: 
[2026-03-03 01:42:49] 2026-03-03 06:42:17,591 | INFO     | exitcode: 0
[2026-03-03 01:42:49] 2026-03-03 06:42:17,591 | INFO     | exitmsg: OK
[2026-03-03 01:42:49] 2026-03-03 06:42:17,592 | INFO     | cpuconsumptiontime: 54497 s
[2026-03-03 01:42:49] 2026-03-03 06:42:17,592 | INFO     | nevents: 400
[2026-03-03 01:42:49] 2026-03-03 06:42:17,592 | INFO     | neventsw: 0
[2026-03-03 01:42:49] 2026-03-03 06:42:17,592 | INFO     | pid: 11253
[2026-03-03 01:42:49] 2026-03-03 06:42:17,592 | INFO     | pgrp: 11253
[2026-03-03 01:42:49] 2026-03-03 06:42:17,592 | INFO     | corecount: 12
[2026-03-03 01:42:49] 2026-03-03 06:42:17,593 | INFO     | event service: False
[2026-03-03 01:42:49] 2026-03-03 06:42:17,593 | INFO     | sizes: {0: 2282094, 1: 2282300, 11: 2282328, 5069: 2308579, 5071: 2317577, 5074: 2317955}
[2026-03-03 01:42:49] 2026-03-03 06:42:17,593 | INFO     | --------------------------------------------------
[2026-03-03 01:42:49] 2026-03-03 06:42:17,593 | INFO     | 
[2026-03-03 01:42:49] 2026-03-03 06:42:17,593 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 01:42:49] 2026-03-03 06:42:17,618 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,619 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,619 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,619 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,621 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,622 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 01:42:49] 2026-03-03 06:42:17,622 | INFO     | job 7036134413 has completed (purged errors)
[2026-03-03 01:42:49] 2026-03-03 06:42:17,622 | INFO     | overall cleanup function is called
[2026-03-03 01:42:49] 2026-03-03 06:42:18,630 | INFO     | --- collectZombieJob: --- 10, [11253]
[2026-03-03 01:42:49] 2026-03-03 06:42:18,630 | INFO     | zombie collector waiting for pid 11253
[2026-03-03 01:42:49] 2026-03-03 06:42:18,631 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 01:42:49] 2026-03-03 06:42:18,631 | INFO     | collected zombie processes
[2026-03-03 01:42:49] 2026-03-03 06:42:18,631 | INFO     | will attempt to kill all subprocesses of pid=11253
[2026-03-03 01:42:49] 2026-03-03 06:42:18,718 | INFO     | process IDs to be killed: [11253] (in reverse order)
[2026-03-03 01:42:49] 2026-03-03 06:42:18,772 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 01:42:49] 2026-03-03 06:42:18,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 01:42:49] 2026-03-03 06:42:18,776 | INFO     | did not find any defunct processes belonging to 11253
[2026-03-03 01:42:49] 2026-03-03 06:42:18,778 | INFO     | did not find any defunct processes belonging to 11253
[2026-03-03 01:42:49] 2026-03-03 06:42:18,779 | INFO     | ready for new job
[2026-03-03 01:42:49] 2026-03-03 06:42:18,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 01:42:49] 2026-03-03 06:42:18,780 | INFO     | **************************************
[2026-03-03 01:42:49] 2026-03-03 06:42:18,780 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 01:42:49] 2026-03-03 06:42:18,780 | INFO     | **************************************
[2026-03-03 01:42:49] 2026-03-03 06:42:18,780 | INFO     | 
[2026-03-03 01:42:49] 2026-03-03 06:42:18,781 | INFO     | architecture information:
[2026-03-03 01:42:49] 2026-03-03 06:42:18,781 | INFO     | executing command: cat /etc/os-release
[2026-03-03 01:42:49] 2026-03-03 06:42:18,796 | INFO     | cat /etc/os-release:
[2026-03-03 01:42:49] NAME="CentOS Linux"
[2026-03-03 01:42:49] VERSION="7 (Core)"
[2026-03-03 01:42:49] ID="centos"
[2026-03-03 01:42:49] ID_LIKE="rhel fedora"
[2026-03-03 01:42:49] VERSION_ID="7"
[2026-03-03 01:42:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 01:42:49] ANSI_COLOR="0;31"
[2026-03-03 01:42:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 01:42:49] HOME_URL="https://www.centos.org/"
[2026-03-03 01:42:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 01:42:49] 
[2026-03-03 01:42:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 01:42:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 01:42:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 01:42:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 01:42:49] 
[2026-03-03 01:42:49] 2026-03-03 06:42:18,797 | INFO     | **************************************
[2026-03-03 01:42:49] 2026-03-03 06:42:19,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 01:42:49] 2026-03-03 06:42:19,316 | INFO     | sufficient remaining disk space (29290921984 B)
[2026-03-03 01:42:49] 2026-03-03 06:42:19,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 01:42:49] 2026-03-03 06:42:19,317 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 01:42:49] 2026-03-03 06:42:19,317 | INFO     | update_server=False
[2026-03-03 01:42:49] 2026-03-03 06:42:19,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 01:42:49] 2026-03-03 06:42:19,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 01:42:49] 2026-03-03 06:42:19,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 01:42:49] 2026-03-03 06:42:19,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 01:42:49] 2026-03-03 06:42:19,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 01:42:49] 2026-03-03 06:42:19,318 | INFO     | aborting loop
[2026-03-03 01:42:49] 2026-03-03 06:42:19,606 | INFO     | all data control threads have been joined
[2026-03-03 01:42:49] 2026-03-03 06:42:19,902 | INFO     | all payload control threads have been joined
[2026-03-03 01:42:49] 2026-03-03 06:42:20,102 | INFO     | all job control threads have been joined
[2026-03-03 01:42:49] 2026-03-03 06:42:20,323 | INFO     | [job] retrieve thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:20,323 | INFO     | [job] queue monitor thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:20,324 | INFO     | [job] job monitor thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:20,552 | INFO     | [data] copytool_in thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:20,609 | INFO     | [data] control thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:20,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:20,730 | INFO     | [payload] validate_post thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:20,907 | INFO     | [payload] control thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:21,104 | INFO     | [job] control thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:21,141 | INFO     | [job] validate thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:21,308 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:21,324 | INFO     | [data] copytool_out thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:21,563 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:21,736 | INFO     | [payload] failed_post thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:21,741 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:23,324 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 01:42:49] 2026-03-03 06:42:40,131 | INFO     | [monitor] cgroup control has ended
[2026-03-03 01:42:49] 2026-03-03 06:42:41,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858108081984)>', '<ExcThread(monitor, started 139857523357440)>']
[2026-03-03 01:42:49] 2026-03-03 06:42:46,615 | INFO     | all workflow threads have been joined
[2026-03-03 01:42:49] 2026-03-03 06:42:46,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 01:42:49] 2026-03-03 06:42:46,616 | INFO     | traces error code: 0
[2026-03-03 01:42:49] 2026-03-03 06:42:46,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 01:42:49] 2026-03-03 06:42:49,028 | INFO     | PID=6876 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-03 01:42:49] 2026-03-03 06:42:49,029 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 01:42:49] 2026-03-03 06:42:49,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 01:42:49] 2026-03-03 06:42:49,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 01:42:49] 2026-03-03 06:42:49,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 01:42:49] 2026-03-03 06:42:49,029 | INFO     | [monitor] control thread has ended
[2026-03-03 01:42:49] 2026-03-03 06:42:49,121 [wrapper] ==== pilot stdout END ====
[2026-03-03 01:42:49] 2026-03-03 06:42:49,125 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 01:42:49] 2026-03-03 06:42:49,129 [wrapper] pilotpid: 6876
[2026-03-03 01:42:49] 2026-03-03 06:42:49,132 [wrapper] Pilot exit status: 0
[2026-03-03 01:42:49] 2026-03-03 06:42:49,148 [wrapper] pandaids: 7036134413
[2026-03-03 01:42:49] 2026-03-03 06:42:49,189 [wrapper] cleanup supervisor_pilot  7771 6877
[2026-03-03 01:42:49] 2026-03-03 06:42:49,193 [wrapper] Test setup, not cleaning
[2026-03-03 01:42:49] 2026-03-03 06:42:49,197 [wrapper] apfmon messages muted
[2026-03-03 01:42:49] 2026-03-03 06:42:49,201 [wrapper] ==== wrapper stdout END ====
[2026-03-03 01:42:49] 2026-03-03 06:42:49,205 [wrapper] ==== wrapper stderr END ====
[2026-03-03 01:42:49]  *** Error codes and diagnostics ***
[2026-03-03 01:42:49]     "exeErrorCode": 0,
[2026-03-03 01:42:49]     "exeErrorDiag": "",
[2026-03-03 01:42:49]     "pilotErrorCode": 0,
[2026-03-03 01:42:49]     "pilotErrorDiag": "",
[2026-03-03 01:42:49]  *** Listing of results directory ***
[2026-03-03 01:42:49] total 507976
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 18:56 pilot3.tar.gz
[2026-03-03 01:42:49] -rwx------ 1 boincer umatlas     36322 Mar  2 19:00 runpilot2-wrapper.sh
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 19:02 queuedata.json
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas       100 Mar  3 00:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 01:42:49] -rwxr-xr-x 1 boincer umatlas      7986 Mar  3 00:17 run_atlas
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas       105 Mar  3 00:17 job.xml
[2026-03-03 01:42:49] -rw-r--r-- 2 boincer umatlas 289278520 Mar  3 00:17 EVNT.48220205._000185.pool.root.1
[2026-03-03 01:42:49] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 00:17 start_atlas.sh
[2026-03-03 01:42:49] drwxrwx--x 2 boincer umatlas      4096 Mar  3 00:17 shared
[2026-03-03 01:42:49] -rw-r--r-- 2 boincer umatlas    597965 Mar  3 00:17 input.tar.gz
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas         0 Mar  3 00:17 boinc_lockfile
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas      2588 Mar  3 00:17 pandaJob.out
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas        57 Mar  3 00:17 setup.sh.local
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas    997730 Mar  3 00:17 agis_schedconf.cvmfs.json
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas   1512931 Mar  3 00:17 agis_ddmendpoints.agis.ALL.json
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas       444 Mar  3 00:17 workernode_map.json
[2026-03-03 01:42:49] drwx------ 5 boincer umatlas      4096 Mar  3 00:17 pilot3
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas      5952 Mar  3 01:40 init_data.xml
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas 224698201 Mar  3 01:41 HITS.48838581._004448.pool.root.1
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas       529 Mar  3 01:41 boinc_task_state.xml
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas      1045 Mar  3 01:42 memory_monitor_summary.json
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas    398617 Mar  3 01:42 log.48838581._004448.job.log.tgz.1
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas      6414 Mar  3 01:42 heartbeat.json
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 01:42 boinc_mmap_file
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas        27 Mar  3 01:42 wrapper_checkpoint.txt
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas       744 Mar  3 01:42 pilotlog.txt
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas        95 Mar  3 01:42 pilot_heartbeat.json
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas    733643 Mar  3 01:42 log.48838581._004448.job.log.1
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas       357 Mar  3 01:42 output.list
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas       620 Mar  3 01:42 runtime_log
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas   1146880 Mar  3 01:42 result.tar.gz
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas       658 Mar  3 01:42 yAOLDmRMSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmq8CLDmyFOazm.diag
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas      9338 Mar  3 01:42 runtime_log.err
[2026-03-03 01:42:49] -rw-r--r-- 1 boincer umatlas     21214 Mar  3 01:42 stderr.txt
[2026-03-03 01:42:49] HITS file was successfully produced:
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas 224698201 Mar  3 01:41 shared/HITS.pool.root.1
[2026-03-03 01:42:49]  *** Contents of shared directory: ***
[2026-03-03 01:42:49] total 503660
[2026-03-03 01:42:49] -rw-r--r-- 2 boincer umatlas 289278520 Mar  3 00:17 ATLAS.root_0
[2026-03-03 01:42:49] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 00:17 start_atlas.sh
[2026-03-03 01:42:49] -rw-r--r-- 2 boincer umatlas    597965 Mar  3 00:17 input.tar.gz
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas 224698201 Mar  3 01:41 HITS.pool.root.1
[2026-03-03 01:42:49] -rw------- 1 boincer umatlas   1146880 Mar  3 01:42 result.tar.gz
01:42:50 (2348): run_atlas exited; CPU time 54477.431606
01:42:50 (2348): called boinc_finish(0)

</stderr_txt>
]]>

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