Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:36:31 (1206835): wrapper (7.7.26015): starting
07:36:31 (1206835): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 07:36:31] Arguments: --nthreads 4
[2026-03-04 07:36:31] Threads: 4
[2026-03-04 07:36:31] Checking for CVMFS
[2026-03-04 07:36:31] No cvmfs_config command found, will try listing directly
[2026-03-04 07:36:31] CVMFS is ok
[2026-03-04 07:36:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 07:36:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 07:36:31] Further information can be found at the LHC@home message board.
[2026-03-04 07:36:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:36:31] Checking for apptainer binary...
[2026-03-04 07:36:31] which: no apptainer in ((null))
[2026-03-04 07:36:31] apptainer is not installed, using version from CVMFS
[2026-03-04 07:36:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:36:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-04 07:36:31] apptainer works
[2026-03-04 07:36:31] Set ATHENA_PROC_NUMBER=4
[2026-03-04 07:36:31] Set ATHENA_CORE_NUMBER=4
[2026-03-04 07:36:31] Starting ATLAS job with PandaID=7036199212
[2026-03-04 07:36:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 13:25:21]  *** The last 200 lines of the pilot log: ***
[2026-03-04 13:25:21] 2026-03-04 12:24:25,149 | INFO     | job 7036199212 has finished - writing final server update
[2026-03-04 13:25:21] 2026-03-04 12:24:25,150 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_546795/.job.ad'
[2026-03-04 13:25:21] 2026-03-04 12:24:25,150 | INFO     | total number of processed events: 400 (read)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,161 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7036199212/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,162 | INFO     | extracted standard info from prmon json
[2026-03-04 13:25:21] 2026-03-04 12:24:25,162 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 13:25:21] 2026-03-04 12:24:25,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 13:25:21] 2026-03-04 12:24:25,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 13:25:21] 2026-03-04 12:24:25,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 13:25:21] 2026-03-04 12:24:25,168 | INFO     | fitting pss+swap vs Time
[2026-03-04 13:25:21] 2026-03-04 12:24:25,169 | INFO     | sum of square deviations: 12403750705.5
[2026-03-04 13:25:21] 2026-03-04 12:24:25,171 | INFO     | sum of deviations: 27282632439.500004
[2026-03-04 13:25:21] 2026-03-04 12:24:25,172 | INFO     | mean x: 1772616626.5
[2026-03-04 13:25:21] 2026-03-04 12:24:25,172 | INFO     | mean y: 2336800.8391812867
[2026-03-04 13:25:21] 2026-03-04 12:24:25,172 | INFO     | intersect: -3896616751.613442
[2026-03-04 13:25:21] 2026-03-04 12:24:25,172 | INFO     | chi2: 2.0578270297230468
[2026-03-04 13:25:21] 2026-03-04 12:24:25,173 | INFO     | sum of square deviations: 11867638328.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,175 | INFO     | sum of deviations: 48475306516.00001
[2026-03-04 13:25:21] 2026-03-04 12:24:25,176 | INFO     | mean x: 1772616474.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,176 | INFO     | mean y: 2342755.1275964393
[2026-03-04 13:25:21] 2026-03-04 12:24:25,176 | INFO     | intersect: -7238198668.326975
[2026-03-04 13:25:21] 2026-03-04 12:24:25,176 | INFO     | chi2: 1.237383035888966
[2026-03-04 13:25:21] 2026-03-04 12:24:25,176 | INFO     | current chi2=1.237383035888966 (change=39.86943421306409 %)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,177 | INFO     | sum of square deviations: 11347200663.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,179 | INFO     | sum of deviations: 47347286677.50001
[2026-03-04 13:25:21] 2026-03-04 12:24:25,180 | INFO     | mean x: 1772616321.5
[2026-03-04 13:25:21] 2026-03-04 12:24:25,180 | INFO     | mean y: 2342424.575301205
[2026-03-04 13:25:21] 2026-03-04 12:24:25,180 | INFO     | intersect: -7394069751.067567
[2026-03-04 13:25:21] 2026-03-04 12:24:25,180 | INFO     | chi2: 1.2376325496247806
[2026-03-04 13:25:21] 2026-03-04 12:24:25,180 | INFO     | current chi2=1.2376325496247806 (change=-0.020164632015943613 %)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,180 | INFO     | right removable region: 331
[2026-03-04 13:25:21] 2026-03-04 12:24:25,181 | INFO     | sum of square deviations: 11867638328.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,184 | INFO     | sum of deviations: -13913404661.000004
[2026-03-04 13:25:21] 2026-03-04 12:24:25,184 | INFO     | mean x: 1772616779.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,184 | INFO     | mean y: 2348427.3798219585
[2026-03-04 13:25:21] 2026-03-04 12:24:25,184 | INFO     | intersect: 2080532297.958037
[2026-03-04 13:25:21] 2026-03-04 12:24:25,184 | INFO     | chi2: 0.8517268685906022
[2026-03-04 13:25:21] 2026-03-04 12:24:25,184 | INFO     | current chi2=0.8517268685906022 (change=58.610376076883774 %)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,185 | INFO     | sum of square deviations: 11347200663.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,187 | INFO     | sum of deviations: -16687381216.500002
[2026-03-04 13:25:21] 2026-03-04 12:24:25,188 | INFO     | mean x: 1772616931.5
[2026-03-04 13:25:21] 2026-03-04 12:24:25,188 | INFO     | mean y: 2349233.358433735
[2026-03-04 13:25:21] 2026-03-04 12:24:25,188 | INFO     | intersect: 2609189049.20976
[2026-03-04 13:25:21] 2026-03-04 12:24:25,188 | INFO     | chi2: 0.8453923011399356
[2026-03-04 13:25:21] 2026-03-04 12:24:25,188 | INFO     | current chi2=0.8453923011399356 (change=0.7437322555232729 %)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,188 | INFO     | left removable region: 20
[2026-03-04 13:25:21] 2026-03-04 12:24:25,189 | INFO     | sum of square deviations: 9327281860.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,191 | INFO     | sum of deviations: 8275803876.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,191 | INFO     | mean x: 1772616901.0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,191 | INFO     | mean y: 2353969.768488746
[2026-03-04 13:25:21] 2026-03-04 12:24:25,191 | INFO     | intersect: -1570433262.3693538
[2026-03-04 13:25:21] 2026-03-04 12:24:25,192 | INFO     | chi2: 0.008819300992654069
[2026-03-04 13:25:21] 2026-03-04 12:24:25,192 | INFO     | current memory leak: 0.89 B/s (using 311 data points, chi2=0.01)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | could have reported an average CPU frequency of 2868 MHz (15 samples)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | ..............................
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . Timing measurements:
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . get job = 0 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . initial setup = 5 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . payload setup = 5 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . stage-in = 0 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . payload execution = 20837 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . stage-out = 1 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,193 | INFO     | . log creation = 0 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,194 | INFO     | ..............................
[2026-03-04 13:25:21] 2026-03-04 12:24:25,283 | INFO     | 
[2026-03-04 13:25:21] 2026-03-04 12:24:25,283 | INFO     | job summary report
[2026-03-04 13:25:21] 2026-03-04 12:24:25,283 | INFO     | --------------------------------------------------
[2026-03-04 13:25:21] 2026-03-04 12:24:25,283 | INFO     | PanDA job id: 7036199212
[2026-03-04 13:25:21] 2026-03-04 12:24:25,283 | INFO     | task id: 48850787
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | errors: (none)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | pilot state: finished 
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | transexitcode: 0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | exeerrorcode: 0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | exeerrordiag: 
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | exitcode: 0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | exitmsg: OK
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | cpuconsumptiontime: 81265 s
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | nevents: 400
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | neventsw: 0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | pid: 1224777
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | pgrp: 1224777
[2026-03-04 13:25:21] 2026-03-04 12:24:25,284 | INFO     | corecount: 4
[2026-03-04 13:25:21] 2026-03-04 12:24:25,285 | INFO     | event service: False
[2026-03-04 13:25:21] 2026-03-04 12:24:25,285 | INFO     | sizes: {0: 2286735, 1: 2287196, 11: 2287196, 20847: 2320921, 20848: 2329941, 20849: 2330319}
[2026-03-04 13:25:21] 2026-03-04 12:24:25,285 | INFO     | --------------------------------------------------
[2026-03-04 13:25:21] 2026-03-04 12:24:25,285 | INFO     | 
[2026-03-04 13:25:21] 2026-03-04 12:24:25,285 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-04 13:25:21] 2026-03-04 12:24:25,307 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,307 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,307 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 13:25:21] 2026-03-04 12:24:25,309 | INFO     | job 7036199212 has completed (purged errors)
[2026-03-04 13:25:21] 2026-03-04 12:24:25,309 | INFO     | overall cleanup function is called
[2026-03-04 13:25:21] 2026-03-04 12:24:26,317 | INFO     | --- collectZombieJob: --- 10, [1224777]
[2026-03-04 13:25:21] 2026-03-04 12:24:26,317 | INFO     | zombie collector waiting for pid 1224777
[2026-03-04 13:25:21] 2026-03-04 12:24:26,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 13:25:21] 2026-03-04 12:24:26,317 | INFO     | collected zombie processes
[2026-03-04 13:25:21] 2026-03-04 12:24:26,317 | INFO     | will attempt to kill all subprocesses of pid=1224777
[2026-03-04 13:25:21] 2026-03-04 12:24:26,612 | INFO     | process IDs to be killed: [1224777] (in reverse order)
[2026-03-04 13:25:21] 2026-03-04 12:24:26,710 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 13:25:21] 2026-03-04 12:24:26,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 13:25:21] 2026-03-04 12:24:26,720 | INFO     | did not find any defunct processes belonging to 1224777
[2026-03-04 13:25:21] 2026-03-04 12:24:26,728 | INFO     | did not find any defunct processes belonging to 1224777
[2026-03-04 13:25:21] 2026-03-04 12:24:26,728 | INFO     | ready for new job
[2026-03-04 13:25:21] 2026-03-04 12:24:26,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 13:25:21] 2026-03-04 12:24:26,731 | INFO     | **************************************
[2026-03-04 13:25:21] 2026-03-04 12:24:26,731 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 13:25:21] 2026-03-04 12:24:26,732 | INFO     | **************************************
[2026-03-04 13:25:21] 2026-03-04 12:24:26,732 | INFO     | 
[2026-03-04 13:25:21] 2026-03-04 12:24:26,735 | INFO     | architecture information:
[2026-03-04 13:25:21] 2026-03-04 12:24:26,736 | INFO     | executing command: cat /etc/os-release
[2026-03-04 13:25:21] 2026-03-04 12:24:26,750 | INFO     | cat /etc/os-release:
[2026-03-04 13:25:21] NAME="CentOS Linux"
[2026-03-04 13:25:21] VERSION="7 (Core)"
[2026-03-04 13:25:21] ID="centos"
[2026-03-04 13:25:21] ID_LIKE="rhel fedora"
[2026-03-04 13:25:21] VERSION_ID="7"
[2026-03-04 13:25:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 13:25:21] ANSI_COLOR="0;31"
[2026-03-04 13:25:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 13:25:21] HOME_URL="https://www.centos.org/"
[2026-03-04 13:25:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 13:25:21] 
[2026-03-04 13:25:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 13:25:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 13:25:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 13:25:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 13:25:21] 
[2026-03-04 13:25:21] 2026-03-04 12:24:26,751 | INFO     | **************************************
[2026-03-04 13:25:21] 2026-03-04 12:24:27,253 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-04 13:25:21] 2026-03-04 12:24:27,269 | INFO     | sufficient remaining disk space (673295892480 B)
[2026-03-04 13:25:21] 2026-03-04 12:24:27,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 13:25:21] 2026-03-04 12:24:27,269 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 13:25:21] 2026-03-04 12:24:27,269 | INFO     | update_server=False
[2026-03-04 13:25:21] 2026-03-04 12:24:27,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 13:25:21] 2026-03-04 12:24:27,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 13:25:21] 2026-03-04 12:24:27,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:25:21] 2026-03-04 12:24:27,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 13:25:21] 2026-03-04 12:24:27,637 | INFO     | all data control threads have been joined
[2026-03-04 13:25:21] 2026-03-04 12:24:28,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:25:21] 2026-03-04 12:24:28,123 | INFO     | aborting loop
[2026-03-04 13:25:21] 2026-03-04 12:24:28,275 | INFO     | [job] retrieve thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:28,276 | INFO     | [job] queue monitor thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:28,341 | INFO     | all job control threads have been joined
[2026-03-04 13:25:21] 2026-03-04 12:24:28,438 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:28,529 | INFO     | [job] validate thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:28,628 | INFO     | all payload control threads have been joined
[2026-03-04 13:25:21] 2026-03-04 12:24:28,641 | INFO     | [data] control thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:28,823 | INFO     | [payload] validate_post thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:28,859 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:29,035 | INFO     | [payload] failed_post thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:29,104 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:29,125 | INFO     | [job] job monitor thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:29,286 | INFO     | [data] copytool_in thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:29,346 | INFO     | [job] control thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:29,349 | INFO     | [data] copytool_out thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:29,633 | INFO     | [payload] control thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:31,276 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:37,585 | INFO     | job.realtimelogging is not enabled
[2026-03-04 13:25:21] 2026-03-04 12:24:38,586 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 13:25:21] 2026-03-04 12:24:56,793 | INFO     | PID=1212824 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 13:25:21] 2026-03-04 12:24:56,793 | INFO     | .. there are 12 such processes running
[2026-03-04 13:25:21] 2026-03-04 12:24:56,794 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 13:25:21] 2026-03-04 12:24:56,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 13:25:21] 2026-03-04 12:24:56,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 13:25:21] 2026-03-04 12:25:15,349 | INFO     | [monitor] cgroup control has ended
[2026-03-04 13:25:21] 2026-03-04 12:25:16,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22637447817024)>', '<ExcThread(monitor, started 22637211567872)>']
[2026-03-04 13:25:21] 2026-03-04 12:25:16,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 13:25:21] 2026-03-04 12:25:16,886 | INFO     | [monitor] control thread has ended
[2026-03-04 13:25:21] 2026-03-04 12:25:21,640 | INFO     | all workflow threads have been joined
[2026-03-04 13:25:21] 2026-03-04 12:25:21,640 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 13:25:21] 2026-03-04 12:25:21,640 | INFO     | traces error code: 0
[2026-03-04 13:25:21] 2026-03-04 12:25:21,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 13:25:21] 2026-03-04 12:25:21,799 [wrapper] ==== pilot stdout END ====
[2026-03-04 13:25:21] 2026-03-04 12:25:21,802 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 13:25:21] 2026-03-04 12:25:21,805 [wrapper] pilotpid: 1212824
[2026-03-04 13:25:21] 2026-03-04 12:25:21,808 [wrapper] Pilot exit status: 0
[2026-03-04 13:25:21] 2026-03-04 12:25:21,818 [wrapper] pandaids: 7036199212
[2026-03-04 13:25:21] 2026-03-04 12:25:21,878 [wrapper] cleanup supervisor_pilot 1557594 1212825
[2026-03-04 13:25:21] 2026-03-04 12:25:21,881 [wrapper] Test setup, not cleaning
[2026-03-04 13:25:21] 2026-03-04 12:25:21,884 [wrapper] apfmon messages muted
[2026-03-04 13:25:21] 2026-03-04 12:25:21,887 [wrapper] ==== wrapper stdout END ====
[2026-03-04 13:25:21] 2026-03-04 12:25:21,890 [wrapper] ==== wrapper stderr END ====
[2026-03-04 13:25:21]  *** Error codes and diagnostics ***
[2026-03-04 13:25:21]     "exeErrorCode": 0,
[2026-03-04 13:25:21]     "exeErrorDiag": "",
[2026-03-04 13:25:21]     "pilotErrorCode": 0,
[2026-03-04 13:25:21]     "pilotErrorDiag": "",
[2026-03-04 13:25:21]  *** Listing of results directory ***
[2026-03-04 13:25:21] total 474444
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-04 13:25:21] -rwx------ 1 boinc boinc     36322 Mar  3 06:01 runpilot2-wrapper.sh
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc      5111 Mar  3 06:03 queuedata.json
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc       100 Mar  4 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 13:25:21] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 07:36 run_atlas
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc       105 Mar  4 07:36 job.xml
[2026-03-04 13:25:21] -rw-r--r-- 2 boinc boinc 236520266 Mar  4 07:36 EVNT.48459303._000001.pool.root.1
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc      6638 Mar  4 07:36 init_data.xml
[2026-03-04 13:25:21] -rw-r--r-- 2 boinc boinc     15845 Mar  4 07:36 start_atlas.sh
[2026-03-04 13:25:21] drwxrwx--x 2 boinc boinc      4096 Mar  4 07:36 shared
[2026-03-04 13:25:21] -rw-r--r-- 2 boinc boinc    597958 Mar  4 07:36 input.tar.gz
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc         0 Mar  4 07:36 boinc_lockfile
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc      2627 Mar  4 07:36 pandaJob.out
[2026-03-04 13:25:21] -rw------- 1 boinc boinc    997749 Mar  4 07:36 agis_schedconf.cvmfs.json
[2026-03-04 13:25:21] -rw------- 1 boinc boinc       451 Mar  4 07:36 workernode_map.json
[2026-03-04 13:25:21] drwx------ 5 boinc boinc      4096 Mar  4 07:36 pilot3
[2026-03-04 13:25:21] -rw------- 1 boinc boinc 238502101 Mar  4 13:23 HITS.48850787._000012.pool.root.1
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc       530 Mar  4 13:23 boinc_task_state.xml
[2026-03-04 13:25:21] -rw------- 1 boinc boinc        95 Mar  4 13:24 pilot_heartbeat.json
[2026-03-04 13:25:21] -rw------- 1 boinc boinc      1034 Mar  4 13:24 memory_monitor_summary.json
[2026-03-04 13:25:21] -rw------- 1 boinc boinc   1516092 Mar  4 13:24 agis_ddmendpoints.agis.ALL.json
[2026-03-04 13:25:21] -rw------- 1 boinc boinc    494485 Mar  4 13:24 log.48850787._000012.job.log.tgz.1
[2026-03-04 13:25:21] -rw------- 1 boinc boinc      6388 Mar  4 13:24 heartbeat.json
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc        28 Mar  4 13:24 wrapper_checkpoint.txt
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc      8192 Mar  4 13:24 boinc_mmap_file
[2026-03-04 13:25:21] -rw------- 1 boinc boinc      4902 Mar  4 13:25 pilotlog.txt
[2026-03-04 13:25:21] -rw------- 1 boinc boinc   2942357 Mar  4 13:25 log.48850787._000012.job.log.1
[2026-03-04 13:25:21] -rw------- 1 boinc boinc       357 Mar  4 13:25 output.list
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc       620 Mar  4 13:25 runtime_log
[2026-03-04 13:25:21] -rw------- 1 boinc boinc   3450880 Mar  4 13:25 result.tar.gz
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc      9205 Mar  4 13:25 runtime_log.err
[2026-03-04 13:25:21] -rw------- 1 boinc boinc       664 Mar  4 13:25 gXGLDmM4WH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKqFLDmwDW5am.diag
[2026-03-04 13:25:21] -rw-r--r-- 1 boinc boinc     20889 Mar  4 13:25 stderr.txt
[2026-03-04 13:25:21] HITS file was successfully produced:
[2026-03-04 13:25:21] -rw------- 1 boinc boinc 238502101 Mar  4 13:23 shared/HITS.pool.root.1
[2026-03-04 13:25:21]  *** Contents of shared directory: ***
[2026-03-04 13:25:21] total 467876
[2026-03-04 13:25:21] -rw-r--r-- 2 boinc boinc 236520266 Mar  4 07:36 ATLAS.root_0
[2026-03-04 13:25:21] -rw-r--r-- 2 boinc boinc     15845 Mar  4 07:36 start_atlas.sh
[2026-03-04 13:25:21] -rw-r--r-- 2 boinc boinc    597958 Mar  4 07:36 input.tar.gz
[2026-03-04 13:25:21] -rw------- 1 boinc boinc 238502101 Mar  4 13:23 HITS.pool.root.1
[2026-03-04 13:25:21] -rw------- 1 boinc boinc   3450880 Mar  4 13:25 result.tar.gz
13:25:23 (1206835): run_atlas exited; CPU time 82062.872829
13:25:23 (1206835): called boinc_finish(0)

</stderr_txt>
]]>

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