Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:11 (3678741): wrapper (7.7.26015): starting
00:01:11 (3678741): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 00:01:11] Arguments: --nthreads 8
[2026-03-03 00:01:11] Threads: 8
[2026-03-03 00:01:11] Checking for CVMFS
[2026-03-03 00:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:01:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:01:12] 2.13.3.0 4282 89706 280960 156832 2 59 35278128 39288832 7172 16776704 0 43067911 99.736 53405155 37399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 00:01:12] CVMFS is ok
[2026-03-03 00:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:01:12] Further information can be found at the LHC@home message board.
[2026-03-03 00:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:01:12] Checking for apptainer binary...
[2026-03-03 00:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:01:12] Running /usr/bin/apptainer --version
[2026-03-03 00:01:12] apptainer version 1.4.5-2.el9
[2026-03-03 00:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:01:13] c-211-32.aglt2.org
[2026-03-03 00:01:13] apptainer works
[2026-03-03 00:01:13] Set ATHENA_PROC_NUMBER=8
[2026-03-03 00:01:13] Set ATHENA_CORE_NUMBER=8
[2026-03-03 00:01:13] Starting ATLAS job with PandaID=7036175545
[2026-03-03 00:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 19:25:34]  *** The last 200 lines of the pilot log: ***
[2026-03-03 19:25:34] 2026-03-04 00:24:47,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 19:25:34] 2026-03-04 00:24:47,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 19:25:34] 2026-03-04 00:24:47,845 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 19:25:34] 2026-03-04 00:24:47,874 | INFO     | fitting pss+swap vs Time
[2026-03-03 19:25:34] 2026-03-04 00:24:47,875 | INFO     | sum of square deviations: 459374287238.4424
[2026-03-03 19:25:34] 2026-03-04 00:24:47,915 | INFO     | sum of deviations: 2123958234709.2095
[2026-03-03 19:25:34] 2026-03-04 00:24:47,915 | INFO     | mean x: 1772549124.6526315
[2026-03-03 19:25:34] 2026-03-04 00:24:47,915 | INFO     | mean y: 2462886.263157895
[2026-03-03 19:25:34] 2026-03-04 00:24:47,915 | INFO     | intersect: -8193077034.712859
[2026-03-03 19:25:34] 2026-03-04 00:24:47,917 | INFO     | chi2: 8.378401032416036
[2026-03-03 19:25:34] 2026-03-04 00:24:47,919 | INFO     | sum of square deviations: 453356398416.77014
[2026-03-03 19:25:34] 2026-03-04 00:24:47,956 | INFO     | sum of deviations: 2188289424655.932
[2026-03-03 19:25:34] 2026-03-04 00:24:47,956 | INFO     | mean x: 1772548972.1577094
[2026-03-03 19:25:34] 2026-03-04 00:24:47,957 | INFO     | mean y: 2464509.436123348
[2026-03-03 19:25:34] 2026-03-04 00:24:47,957 | INFO     | intersect: -8553387319.287013
[2026-03-03 19:25:34] 2026-03-04 00:24:47,958 | INFO     | chi2: 7.594074583327856
[2026-03-03 19:25:34] 2026-03-04 00:24:47,959 | INFO     | current chi2=7.594074583327856 (change=9.36129037096244 %)
[2026-03-03 19:25:34] 2026-03-04 00:24:47,959 | INFO     | right removable region: 1134
[2026-03-03 19:25:34] 2026-03-04 00:24:47,960 | INFO     | sum of square deviations: 453355666174.08466
[2026-03-03 19:25:34] 2026-03-04 00:24:47,986 | INFO     | monitor loop #3804: job 0:7036175545 is in state 'finished'
[2026-03-03 19:25:34] 2026-03-04 00:24:47,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 19:25:34] 2026-03-04 00:24:47,999 | INFO     | sum of deviations: 1756788782288.9856
[2026-03-03 19:25:34] 2026-03-04 00:24:47,999 | INFO     | mean x: 1772549277.1568282
[2026-03-03 19:25:34] 2026-03-04 00:24:47,999 | INFO     | mean y: 2472187.1629955946
[2026-03-03 19:25:34] 2026-03-04 00:24:48,000 | INFO     | intersect: -6866295357.848384
[2026-03-03 19:25:34] 2026-03-04 00:24:48,001 | INFO     | chi2: 4.599627788571814
[2026-03-03 19:25:34] 2026-03-04 00:24:48,001 | INFO     | current chi2=4.599627788571814 (change=45.10136515576358 %)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,003 | INFO     | sum of square deviations: 447390044504.14496
[2026-03-03 19:25:34] 2026-03-04 00:24:48,044 | INFO     | sum of deviations: 1495839251907.651
[2026-03-03 19:25:34] 2026-03-04 00:24:48,044 | INFO     | mean x: 1772549429.658407
[2026-03-03 19:25:34] 2026-03-04 00:24:48,045 | INFO     | mean y: 2478856.6053097346
[2026-03-03 19:25:34] 2026-03-04 00:24:48,045 | INFO     | intersect: -5924003069.849359
[2026-03-03 19:25:34] 2026-03-04 00:24:48,047 | INFO     | chi2: 2.8125376365589996
[2026-03-03 19:25:34] 2026-03-04 00:24:48,047 | INFO     | current chi2=2.8125376365589996 (change=38.852929718639395 %)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,049 | INFO     | sum of square deviations: 441477257796.46185
[2026-03-03 19:25:34] 2026-03-04 00:24:48,086 | INFO     | sum of deviations: 1331152235844.9678
[2026-03-03 19:25:34] 2026-03-04 00:24:48,086 | INFO     | mean x: 1772549582.1564445
[2026-03-03 19:25:34] 2026-03-04 00:24:48,087 | INFO     | mean y: 2483101.8524444443
[2026-03-03 19:25:34] 2026-03-04 00:24:48,087 | INFO     | intersect: -5342148581.352969
[2026-03-03 19:25:34] 2026-03-04 00:24:48,088 | INFO     | chi2: 2.1235452017413214
[2026-03-03 19:25:34] 2026-03-04 00:24:48,089 | INFO     | current chi2=2.1235452017413214 (change=24.497180974994034 %)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,089 | INFO     | left removable region: 30
[2026-03-03 19:25:34] 2026-03-04 00:24:48,091 | INFO     | sum of square deviations: 417211927957.9971
[2026-03-03 19:25:34] 2026-03-04 00:24:48,128 | INFO     | sum of deviations: 1092236629067.8207
[2026-03-03 19:25:34] 2026-03-04 00:24:48,128 | INFO     | mean x: 1772549856.664855
[2026-03-03 19:25:34] 2026-03-04 00:24:48,128 | INFO     | mean y: 2492820.410326087
[2026-03-03 19:25:34] 2026-03-04 00:24:48,129 | INFO     | intersect: -4637939896.300452
[2026-03-03 19:25:34] 2026-03-04 00:24:48,130 | INFO     | chi2: 0.566934213960108
[2026-03-03 19:25:34] 2026-03-04 00:24:48,130 | INFO     | current memory leak: 2.62 B/s (using 1104 data points, chi2=0.57)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,132 | INFO     | could have reported an average CPU frequency of 2899 MHz (42 samples)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,132 | INFO     | ..............................
[2026-03-03 19:25:34] 2026-03-04 00:24:48,133 | INFO     | . Timing measurements:
[2026-03-03 19:25:34] 2026-03-04 00:24:48,133 | INFO     | . get job = 1 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,133 | INFO     | . initial setup = 62 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,133 | INFO     | . payload setup = 73 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,134 | INFO     | . stage-in = 1 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,134 | INFO     | . payload execution = 69546 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,134 | INFO     | . stage-out = 2 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,134 | INFO     | . log creation = 0 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,135 | INFO     | ..............................
[2026-03-03 19:25:34] 2026-03-04 00:24:48,287 | INFO     | 
[2026-03-03 19:25:34] 2026-03-04 00:24:48,287 | INFO     | job summary report
[2026-03-03 19:25:34] 2026-03-04 00:24:48,287 | INFO     | --------------------------------------------------
[2026-03-03 19:25:34] 2026-03-04 00:24:48,288 | INFO     | PanDA job id: 7036175545
[2026-03-03 19:25:34] 2026-03-04 00:24:48,288 | INFO     | task id: 48851556
[2026-03-03 19:25:34] 2026-03-04 00:24:48,288 | INFO     | errors: (none)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 19:25:34] 2026-03-04 00:24:48,289 | INFO     | pilot state: finished 
[2026-03-03 19:25:34] 2026-03-04 00:24:48,289 | INFO     | transexitcode: 0
[2026-03-03 19:25:34] 2026-03-04 00:24:48,289 | INFO     | exeerrorcode: 0
[2026-03-03 19:25:34] 2026-03-04 00:24:48,290 | INFO     | exeerrordiag: 
[2026-03-03 19:25:34] 2026-03-04 00:24:48,290 | INFO     | exitcode: 0
[2026-03-03 19:25:34] 2026-03-04 00:24:48,290 | INFO     | exitmsg: OK
[2026-03-03 19:25:34] 2026-03-04 00:24:48,291 | INFO     | cpuconsumptiontime: 99382 s
[2026-03-03 19:25:34] 2026-03-04 00:24:48,291 | INFO     | nevents: 400
[2026-03-03 19:25:34] 2026-03-04 00:24:48,291 | INFO     | neventsw: 0
[2026-03-03 19:25:34] 2026-03-04 00:24:48,291 | INFO     | pid: 3710811
[2026-03-03 19:25:34] 2026-03-04 00:24:48,292 | INFO     | pgrp: 3710811
[2026-03-03 19:25:34] 2026-03-04 00:24:48,292 | INFO     | corecount: 8
[2026-03-03 19:25:34] 2026-03-04 00:24:48,292 | INFO     | event service: False
[2026-03-03 19:25:34] 2026-03-04 00:24:48,292 | INFO     | sizes: {0: 2281257, 1: 2281942, 3: 2281970, 4: 2281970, 5: 2282403, 6: 2282459, 7: 2282615, 69624: 2337785, 69626: 2351582, 69627: 2351638, 69629: 2351832}
[2026-03-03 19:25:34] 2026-03-04 00:24:48,292 | INFO     | --------------------------------------------------
[2026-03-03 19:25:34] 2026-03-04 00:24:48,293 | INFO     | 
[2026-03-03 19:25:34] 2026-03-04 00:24:48,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-03 19:25:34] 2026-03-04 00:24:48,313 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,313 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,313 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,314 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,317 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,318 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 19:25:34] 2026-03-04 00:24:48,318 | INFO     | job 7036175545 has completed (purged errors)
[2026-03-03 19:25:34] 2026-03-04 00:24:48,318 | INFO     | overall cleanup function is called
[2026-03-03 19:25:34] 2026-03-04 00:24:48,654 | INFO     | PID=3689558 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 19:25:34] 2026-03-04 00:24:48,654 | INFO     | .. there are 6 such processes running
[2026-03-03 19:25:34] 2026-03-04 00:24:49,326 | INFO     | --- collectZombieJob: --- 10, [3710811]
[2026-03-03 19:25:34] 2026-03-04 00:24:49,327 | INFO     | zombie collector waiting for pid 3710811
[2026-03-03 19:25:34] 2026-03-04 00:24:49,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 19:25:34] 2026-03-04 00:24:49,327 | INFO     | collected zombie processes
[2026-03-03 19:25:34] 2026-03-04 00:24:49,327 | INFO     | will attempt to kill all subprocesses of pid=3710811
[2026-03-03 19:25:34] 2026-03-04 00:24:49,623 | INFO     | process IDs to be killed: [3710811] (in reverse order)
[2026-03-03 19:25:34] 2026-03-04 00:24:49,703 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 19:25:34] 2026-03-04 00:24:49,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 19:25:34] 2026-03-04 00:24:49,715 | INFO     | did not find any defunct processes belonging to 3710811
[2026-03-03 19:25:34] 2026-03-04 00:24:49,725 | INFO     | did not find any defunct processes belonging to 3710811
[2026-03-03 19:25:34] 2026-03-04 00:24:49,725 | INFO     | ready for new job
[2026-03-03 19:25:34] 2026-03-04 00:24:49,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 19:25:34] 2026-03-04 00:24:49,731 | INFO     | **************************************
[2026-03-03 19:25:34] 2026-03-04 00:24:49,731 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 19:25:34] 2026-03-04 00:24:49,731 | INFO     | **************************************
[2026-03-03 19:25:34] 2026-03-04 00:24:49,732 | INFO     | 
[2026-03-03 19:25:34] 2026-03-04 00:24:49,734 | INFO     | architecture information:
[2026-03-03 19:25:34] 2026-03-04 00:24:49,734 | INFO     | executing command: cat /etc/os-release
[2026-03-03 19:25:34] 2026-03-04 00:24:49,748 | INFO     | cat /etc/os-release:
[2026-03-03 19:25:34] NAME="CentOS Linux"
[2026-03-03 19:25:34] VERSION="7 (Core)"
[2026-03-03 19:25:34] ID="centos"
[2026-03-03 19:25:34] ID_LIKE="rhel fedora"
[2026-03-03 19:25:34] VERSION_ID="7"
[2026-03-03 19:25:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 19:25:34] ANSI_COLOR="0;31"
[2026-03-03 19:25:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 19:25:34] HOME_URL="https://www.centos.org/"
[2026-03-03 19:25:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 19:25:34] 
[2026-03-03 19:25:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 19:25:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 19:25:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 19:25:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 19:25:34] 
[2026-03-03 19:25:34] 2026-03-04 00:24:49,748 | INFO     | **************************************
[2026-03-03 19:25:34] 2026-03-04 00:24:50,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-03 19:25:34] 2026-03-04 00:24:50,268 | INFO     | sufficient remaining disk space (51308920832 B)
[2026-03-03 19:25:34] 2026-03-04 00:24:50,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 19:25:34] 2026-03-04 00:24:50,269 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 19:25:34] 2026-03-04 00:24:50,269 | INFO     | update_server=False
[2026-03-03 19:25:34] 2026-03-04 00:24:50,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 19:25:34] 2026-03-04 00:24:50,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:25:34] 2026-03-04 00:24:50,407 | INFO     | all job control threads have been joined
[2026-03-03 19:25:34] 2026-03-04 00:24:50,501 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 19:25:34] 2026-03-04 00:24:50,501 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 19:25:34] 2026-03-04 00:24:50,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:25:34] 2026-03-04 00:24:50,501 | INFO     | will abort loop
[2026-03-03 19:25:34] 2026-03-04 00:24:51,203 | INFO     | all data control threads have been joined
[2026-03-03 19:25:34] 2026-03-04 00:24:51,275 | INFO     | [job] retrieve thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:51,275 | INFO     | [job] queue monitor thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:51,406 | INFO     | all payload control threads have been joined
[2026-03-03 19:25:34] 2026-03-04 00:24:51,413 | INFO     | [job] control thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:51,507 | INFO     | [job] job monitor thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:51,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 19:25:34] 2026-03-04 00:24:52,007 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,111 | INFO     | [job] validate thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,208 | INFO     | [data] control thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,315 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,325 | INFO     | [data] copytool_in thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,411 | INFO     | [payload] control thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,550 | INFO     | [payload] failed_post thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,581 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:52,664 | INFO     | [payload] validate_post thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:53,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 19:25:34] 2026-03-04 00:24:53,673 | INFO     | [data] copytool_out thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:24:57,111 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:25:00,795 | INFO     | job.realtimelogging is not enabled
[2026-03-03 19:25:34] 2026-03-04 00:25:01,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 19:25:34] 2026-03-04 00:25:21,037 | INFO     | PID=3689558 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 19:25:34] 2026-03-04 00:25:21,037 | INFO     | .. there are 6 such processes running
[2026-03-03 19:25:34] 2026-03-04 00:25:21,038 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 19:25:34] 2026-03-04 00:25:21,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 19:25:34] 2026-03-04 00:25:21,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 19:25:34] 2026-03-04 00:25:29,099 | INFO     | [monitor] cgroup control has ended
[2026-03-03 19:25:34] 2026-03-04 00:25:29,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407367358272)>', '<ExcThread(monitor, started 140406834587392)>']
[2026-03-03 19:25:34] 2026-03-04 00:25:30,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 19:25:34] 2026-03-04 00:25:30,087 | INFO     | [monitor] control thread has ended
[2026-03-03 19:25:34] 2026-03-04 00:25:34,431 | INFO     | all workflow threads have been joined
[2026-03-03 19:25:34] 2026-03-04 00:25:34,431 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 19:25:34] 2026-03-04 00:25:34,432 | INFO     | traces error code: 0
[2026-03-03 19:25:34] 2026-03-04 00:25:34,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 19:25:34] 2026-03-04 00:25:34,541 [wrapper] ==== pilot stdout END ====
[2026-03-03 19:25:34] 2026-03-04 00:25:34,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 19:25:34] 2026-03-04 00:25:34,547 [wrapper] pilotpid: 3689558
[2026-03-03 19:25:34] 2026-03-04 00:25:34,549 [wrapper] Pilot exit status: 0
[2026-03-03 19:25:34] 2026-03-04 00:25:34,560 [wrapper] pandaids: 7036175545
[2026-03-03 19:25:34] 2026-03-04 00:25:34,612 [wrapper] cleanup supervisor_pilot 1072442 3689559
[2026-03-03 19:25:34] 2026-03-04 00:25:34,615 [wrapper] Test setup, not cleaning
[2026-03-03 19:25:34] 2026-03-04 00:25:34,618 [wrapper] apfmon messages muted
[2026-03-03 19:25:34] 2026-03-04 00:25:34,620 [wrapper] ==== wrapper stdout END ====
[2026-03-03 19:25:34] 2026-03-04 00:25:34,623 [wrapper] ==== wrapper stderr END ====
[2026-03-03 19:25:34]  *** Error codes and diagnostics ***
[2026-03-03 19:25:34]     "exeErrorCode": 0,
[2026-03-03 19:25:34]     "exeErrorDiag": "",
[2026-03-03 19:25:34]     "pilotErrorCode": 0,
[2026-03-03 19:25:34]     "pilotErrorDiag": "",
[2026-03-03 19:25:34]  *** Listing of results directory ***
[2026-03-03 19:25:34] total 460552
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 19:02 queuedata.json
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 19:05 pilot3.tar.gz
[2026-03-03 19:25:34] -rwx------. 1 boincer umatlas     36322 Mar  2 19:05 runpilot2-wrapper.sh
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas       100 Mar  3 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 19:25:34] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 00:01 run_atlas
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas       105 Mar  3 00:01 job.xml
[2026-03-03 19:25:34] -rw-r--r--. 2 boincer umatlas 248775065 Mar  3 00:01 EVNT.48460333._000001.pool.root.1
[2026-03-03 19:25:34] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 00:01 start_atlas.sh
[2026-03-03 19:25:34] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 00:01 shared
[2026-03-03 19:25:34] -rw-r--r--. 2 boincer umatlas    597961 Mar  3 00:01 input.tar.gz
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas         0 Mar  3 00:01 boinc_lockfile
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas      2618 Mar  3 00:01 pandaJob.out
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas        57 Mar  3 00:01 setup.sh.local
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas       442 Mar  3 00:04 workernode_map.json
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas    997730 Mar  3 00:04 agis_schedconf.cvmfs.json
[2026-03-03 19:25:34] drwx------. 5 boincer umatlas      4096 Mar  3 00:04 pilot3
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas      6527 Mar  3 19:22 init_data.xml
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas 200369304 Mar  3 19:24 HITS.48851556._000020.pool.root.1
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas       532 Mar  3 19:24 boinc_task_state.xml
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas      1037 Mar  3 19:24 memory_monitor_summary.json
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas   1516092 Mar  3 19:24 agis_ddmendpoints.agis.ALL.json
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas   1131526 Mar  3 19:24 log.48851556._000020.job.log.tgz.1
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas      6376 Mar  3 19:24 heartbeat.json
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 19:25 boinc_mmap_file
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas        29 Mar  3 19:25 wrapper_checkpoint.txt
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas        95 Mar  3 19:25 pilot_heartbeat.json
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas      5077 Mar  3 19:25 pilotlog.txt
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas   8128395 Mar  3 19:25 log.48851556._000020.job.log.1
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas       357 Mar  3 19:25 output.list
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas       620 Mar  3 19:25 runtime_log
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas   9277440 Mar  3 19:25 result.tar.gz
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas      9342 Mar  3 19:25 runtime_log.err
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas       659 Mar  3 19:25 PxnLDmhRSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFDDLDmiJ6Upn.diag
[2026-03-03 19:25:34] -rw-r--r--. 1 boincer umatlas     21267 Mar  3 19:25 stderr.txt
[2026-03-03 19:25:34] HITS file was successfully produced:
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas 200369304 Mar  3 19:24 shared/HITS.pool.root.1
[2026-03-03 19:25:34]  *** Contents of shared directory: ***
[2026-03-03 19:25:34] total 448292
[2026-03-03 19:25:34] -rw-r--r--. 2 boincer umatlas 248775065 Mar  3 00:01 ATLAS.root_0
[2026-03-03 19:25:34] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 00:01 start_atlas.sh
[2026-03-03 19:25:34] -rw-r--r--. 2 boincer umatlas    597961 Mar  3 00:01 input.tar.gz
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas 200369304 Mar  3 19:24 HITS.pool.root.1
[2026-03-03 19:25:34] -rw-------. 1 boincer umatlas   9277440 Mar  3 19:25 result.tar.gz
19:25:35 (3678741): run_atlas exited; CPU time 101931.387942
19:25:35 (3678741): called boinc_finish(0)

</stderr_txt>
]]>

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