Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:57:55 (388988): wrapper (7.7.26015): starting
22:57:55 (388988): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 22:57:55] Arguments: --nthreads 4
[2026-03-04 22:57:55] Threads: 4
[2026-03-04 22:57:55] Checking for CVMFS
[2026-03-04 22:57:55] No cvmfs_config command found, will try listing directly
[2026-03-04 22:57:55] CVMFS is ok
[2026-03-04 22:57:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 22:57:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 22:57:55] Further information can be found at the LHC@home message board.
[2026-03-04 22:57:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 22:57:55] Checking for apptainer binary...
[2026-03-04 22:57:55] which: no apptainer in ((null))
[2026-03-04 22:57:55] apptainer is not installed, using version from CVMFS
[2026-03-04 22:57:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 22:57:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-04 22:57:55] apptainer works
[2026-03-04 22:57:55] Set ATHENA_PROC_NUMBER=4
[2026-03-04 22:57:55] Set ATHENA_CORE_NUMBER=4
[2026-03-04 22:57:55] Starting ATLAS job with PandaID=7036191549
[2026-03-04 22:57:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 04:04:02]  *** The last 200 lines of the pilot log: ***
[2026-03-05 04:04:02] 2026-03-05 03:03:05,941 | INFO     | job 7036191549 has finished - writing final server update
[2026-03-05 04:04:02] 2026-03-05 03:03:05,941 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_956373/.job.ad'
[2026-03-05 04:04:02] 2026-03-05 03:03:05,941 | INFO     | total number of processed events: 400 (read)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,959 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7036191549/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,959 | INFO     | extracted standard info from prmon json
[2026-03-05 04:04:02] 2026-03-05 03:03:05,959 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 04:04:02] 2026-03-05 03:03:05,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 04:04:02] 2026-03-05 03:03:05,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 04:04:02] 2026-03-05 03:03:05,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 04:04:02] 2026-03-05 03:03:05,963 | INFO     | fitting pss+swap vs Time
[2026-03-05 04:04:02] 2026-03-05 03:03:05,964 | INFO     | sum of square deviations: 8372156975.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,965 | INFO     | sum of deviations: 49182308563.49999
[2026-03-05 04:04:02] 2026-03-05 03:03:05,966 | INFO     | mean x: 1772670628.5
[2026-03-05 04:04:02] 2026-03-05 03:03:05,966 | INFO     | mean y: 2335080.9033333333
[2026-03-05 04:04:02] 2026-03-05 03:03:05,966 | INFO     | intersect: -10411233858.69965
[2026-03-05 04:04:02] 2026-03-05 03:03:05,966 | INFO     | chi2: 1.1049213895041679
[2026-03-05 04:04:02] 2026-03-05 03:03:05,966 | INFO     | sum of square deviations: 7960484140.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | sum of deviations: 48259457161.99999
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | mean x: 1772670476.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | mean y: 2334739.0101694916
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | intersect: -10744262251.115124
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | chi2: 1.1048919188153186
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | current chi2=1.1048919188153186 (change=0.0026672204130749762 %)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | right removable region: 294
[2026-03-05 04:04:02] 2026-03-05 03:03:05,968 | INFO     | sum of square deviations: 7960484140.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,970 | INFO     | sum of deviations: 16575418187.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,970 | INFO     | mean x: 1772670781.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,970 | INFO     | mean y: 2347054.3762711864
[2026-03-05 04:04:02] 2026-03-05 03:03:05,970 | INFO     | intersect: -3688729893.4826937
[2026-03-05 04:04:02] 2026-03-05 03:03:05,971 | INFO     | chi2: 0.004595163507429456
[2026-03-05 04:04:02] 2026-03-05 03:03:05,971 | INFO     | current chi2=0.004595163507429456 (change=99.58411851276664 %)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,971 | INFO     | sum of square deviations: 7562532492.5
[2026-03-05 04:04:02] 2026-03-05 03:03:05,972 | INFO     | sum of deviations: 14060480693.499996
[2026-03-05 04:04:02] 2026-03-05 03:03:05,972 | INFO     | mean x: 1772670933.5
[2026-03-05 04:04:02] 2026-03-05 03:03:05,972 | INFO     | mean y: 2348016.231034483
[2026-03-05 04:04:02] 2026-03-05 03:03:05,972 | INFO     | intersect: -3293453418.159347
[2026-03-05 04:04:02] 2026-03-05 03:03:05,972 | INFO     | chi2: 0.0030793860878928995
[2026-03-05 04:04:02] 2026-03-05 03:03:05,972 | INFO     | current chi2=0.0030793860878928995 (change=32.98636527483406 %)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,973 | INFO     | sum of square deviations: 7178069470.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | sum of deviations: 12329452309.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | mean x: 1772671086.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | mean y: 2348702.035087719
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | intersect: -3042489984.150021
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | chi2: 0.0025330787797505565
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | current chi2=0.0025330787797505565 (change=17.740786395386984 %)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | left removable region: 30
[2026-03-05 04:04:02] 2026-03-05 03:03:05,974 | INFO     | sum of square deviations: 5705372090.0
[2026-03-05 04:04:02] 2026-03-05 03:03:05,976 | INFO     | sum of deviations: 7947738403.499999
[2026-03-05 04:04:02] 2026-03-05 03:03:05,976 | INFO     | mean x: 1772671360.5
[2026-03-05 04:04:02] 2026-03-05 03:03:05,976 | INFO     | mean y: 2350345.640151515
[2026-03-05 04:04:02] 2026-03-05 03:03:05,976 | INFO     | intersect: -2467029043.887174
[2026-03-05 04:04:02] 2026-03-05 03:03:05,976 | INFO     | chi2: 0.0013055760360103873
[2026-03-05 04:04:02] 2026-03-05 03:03:05,976 | INFO     | current memory leak: 1.39 B/s (using 264 data points, chi2=0.00)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,976 | INFO     | could have reported an average CPU frequency of 3549 MHz (14 samples)
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | ..............................
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . Timing measurements:
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . get job = 0 s
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . initial setup = 5 s
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . payload setup = 5 s
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . stage-in = 0 s
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . payload execution = 18273 s
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . stage-out = 0 s
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | . log creation = 0 s
[2026-03-05 04:04:02] 2026-03-05 03:03:05,977 | INFO     | ..............................
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | 
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | job summary report
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | --------------------------------------------------
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | PanDA job id: 7036191549
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | task id: 48848904
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | errors: (none)
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | pilot state: finished 
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | transexitcode: 0
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | exeerrorcode: 0
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | exeerrordiag: 
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | exitcode: 0
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | exitmsg: OK
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | cpuconsumptiontime: 71166 s
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | nevents: 400
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | neventsw: 0
[2026-03-05 04:04:02] 2026-03-05 03:03:06,029 | INFO     | pid: 401911
[2026-03-05 04:04:02] 2026-03-05 03:03:06,030 | INFO     | pgrp: 401911
[2026-03-05 04:04:02] 2026-03-05 03:03:06,030 | INFO     | corecount: 4
[2026-03-05 04:04:02] 2026-03-05 03:03:06,030 | INFO     | event service: False
[2026-03-05 04:04:02] 2026-03-05 03:03:06,030 | INFO     | sizes: {0: 2295680, 1: 2295886, 11: 2295914, 18282: 2328326, 18284: 2337346, 18285: 2337402, 18287: 2337724}
[2026-03-05 04:04:02] 2026-03-05 03:03:06,030 | INFO     | --------------------------------------------------
[2026-03-05 04:04:02] 2026-03-05 03:03:06,030 | INFO     | 
[2026-03-05 04:04:02] 2026-03-05 03:03:06,030 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot88/slots/2
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,052 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 04:04:02] 2026-03-05 03:03:06,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 04:04:02] 2026-03-05 03:03:06,053 | INFO     | job 7036191549 has completed (purged errors)
[2026-03-05 04:04:02] 2026-03-05 03:03:06,053 | INFO     | overall cleanup function is called
[2026-03-05 04:04:02] 2026-03-05 03:03:07,060 | INFO     | --- collectZombieJob: --- 10, [401911]
[2026-03-05 04:04:02] 2026-03-05 03:03:07,060 | INFO     | zombie collector waiting for pid 401911
[2026-03-05 04:04:02] 2026-03-05 03:03:07,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 04:04:02] 2026-03-05 03:03:07,060 | INFO     | collected zombie processes
[2026-03-05 04:04:02] 2026-03-05 03:03:07,060 | INFO     | will attempt to kill all subprocesses of pid=401911
[2026-03-05 04:04:02] 2026-03-05 03:03:07,535 | INFO     | process IDs to be killed: [401911] (in reverse order)
[2026-03-05 04:04:02] 2026-03-05 03:03:07,751 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 04:04:02] 2026-03-05 03:03:07,751 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 04:04:02] 2026-03-05 03:03:07,782 | INFO     | did not find any defunct processes belonging to 401911
[2026-03-05 04:04:02] 2026-03-05 03:03:07,811 | INFO     | did not find any defunct processes belonging to 401911
[2026-03-05 04:04:02] 2026-03-05 03:03:07,811 | INFO     | ready for new job
[2026-03-05 04:04:02] 2026-03-05 03:03:07,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 04:04:02] 2026-03-05 03:03:07,813 | INFO     | **************************************
[2026-03-05 04:04:02] 2026-03-05 03:03:07,813 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 04:04:02] 2026-03-05 03:03:07,814 | INFO     | **************************************
[2026-03-05 04:04:02] 2026-03-05 03:03:07,814 | INFO     | 
[2026-03-05 04:04:02] 2026-03-05 03:03:07,819 | INFO     | architecture information:
[2026-03-05 04:04:02] 2026-03-05 03:03:07,819 | INFO     | executing command: cat /etc/os-release
[2026-03-05 04:04:02] 2026-03-05 03:03:07,832 | INFO     | cat /etc/os-release:
[2026-03-05 04:04:02] NAME="CentOS Linux"
[2026-03-05 04:04:02] VERSION="7 (Core)"
[2026-03-05 04:04:02] ID="centos"
[2026-03-05 04:04:02] ID_LIKE="rhel fedora"
[2026-03-05 04:04:02] VERSION_ID="7"
[2026-03-05 04:04:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 04:04:02] ANSI_COLOR="0;31"
[2026-03-05 04:04:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 04:04:02] HOME_URL="https://www.centos.org/"
[2026-03-05 04:04:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 04:04:02] 
[2026-03-05 04:04:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 04:04:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 04:04:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 04:04:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 04:04:02] 
[2026-03-05 04:04:02] 2026-03-05 03:03:07,832 | INFO     | **************************************
[2026-03-05 04:04:02] 2026-03-05 03:03:08,335 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/2
[2026-03-05 04:04:02] 2026-03-05 03:03:08,349 | INFO     | sufficient remaining disk space (20191379456 B)
[2026-03-05 04:04:02] 2026-03-05 03:03:08,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 04:04:02] 2026-03-05 03:03:08,349 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 04:04:02] 2026-03-05 03:03:08,350 | INFO     | update_server=False
[2026-03-05 04:04:02] 2026-03-05 03:03:08,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 04:04:02] 2026-03-05 03:03:08,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:04:02] 2026-03-05 03:03:08,350 | INFO     | aborting loop
[2026-03-05 04:04:02] 2026-03-05 03:03:08,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 04:04:02] 2026-03-05 03:03:08,955 | INFO     | all data control threads have been joined
[2026-03-05 04:04:02] 2026-03-05 03:03:09,142 | INFO     | all job control threads have been joined
[2026-03-05 04:04:02] 2026-03-05 03:03:09,355 | INFO     | [job] retrieve thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:09,355 | INFO     | [job] job monitor thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:09,586 | INFO     | [job] validate thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:09,632 | INFO     | all payload control threads have been joined
[2026-03-05 04:04:02] 2026-03-05 03:03:09,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 04:04:02] 2026-03-05 03:03:09,960 | INFO     | [data] control thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:09,989 | INFO     | [payload] failed_post thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:09,989 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:10,147 | INFO     | [job] control thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:10,490 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:10,503 | INFO     | [data] copytool_out thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:10,531 | INFO     | [payload] validate_post thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:10,587 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:10,637 | INFO     | [payload] control thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:10,713 | INFO     | [data] copytool_in thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:11,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:04:02] 2026-03-05 03:03:12,044 | INFO     | [job] queue monitor thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:13,829 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:19,157 | INFO     | job.realtimelogging is not enabled
[2026-03-05 04:04:02] 2026-03-05 03:03:20,162 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 04:04:02] 2026-03-05 03:03:38,295 | INFO     | [monitor] cgroup control has ended
[2026-03-05 04:04:02] 2026-03-05 03:03:38,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23072484316992)>', '<ExcThread(monitor, started 23072234264320)>']
[2026-03-05 04:04:02] 2026-03-05 03:03:38,629 | INFO     | PID=393758 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 04:04:02] 2026-03-05 03:03:38,629 | INFO     | .. there are 46 such processes running
[2026-03-05 04:04:02] 2026-03-05 03:03:38,630 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 04:04:02] 2026-03-05 03:03:38,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 04:04:02] 2026-03-05 03:03:38,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 04:04:02] 2026-03-05 03:03:38,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 04:04:02] 2026-03-05 03:03:38,630 | INFO     | [monitor] control thread has ended
[2026-03-05 04:04:02] 2026-03-05 03:03:43,421 | INFO     | all workflow threads have been joined
[2026-03-05 04:04:02] 2026-03-05 03:03:43,421 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 04:04:02] 2026-03-05 03:03:43,421 | INFO     | traces error code: 0
[2026-03-05 04:04:02] 2026-03-05 03:03:43,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 04:04:02] 2026-03-05 03:03:43,560 [wrapper] ==== pilot stdout END ====
[2026-03-05 04:04:02] 2026-03-05 03:03:43,569 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 04:04:02] 2026-03-05 03:03:43,573 [wrapper] pilotpid: 393758
[2026-03-05 04:04:02] 2026-03-05 03:03:43,578 [wrapper] Pilot exit status: 0
[2026-03-05 04:04:02] 2026-03-05 03:03:43,586 [wrapper] pandaids: 7036191549
[2026-03-05 04:04:02] 2026-03-05 03:03:43,724 [wrapper] cleanup supervisor_pilot 2733688 393759
[2026-03-05 04:04:02] 2026-03-05 03:03:43,729 [wrapper] Test setup, not cleaning
[2026-03-05 04:04:02] 2026-03-05 03:03:43,733 [wrapper] apfmon messages muted
[2026-03-05 04:04:02] 2026-03-05 03:03:43,739 [wrapper] ==== wrapper stdout END ====
[2026-03-05 04:04:02] 2026-03-05 03:03:43,742 [wrapper] ==== wrapper stderr END ====
[2026-03-05 04:04:02]  *** Error codes and diagnostics ***
[2026-03-05 04:04:02]     "exeErrorCode": 0,
[2026-03-05 04:04:02]     "exeErrorDiag": "",
[2026-03-05 04:04:02]     "pilotErrorCode": 0,
[2026-03-05 04:04:02]     "pilotErrorDiag": "",
[2026-03-05 04:04:02]  *** Listing of results directory ***
[2026-03-05 04:04:02] total 482844
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-05 04:04:02] -rwx------. 1 boinc boinc     36322 Mar  3 05:45 runpilot2-wrapper.sh
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc      5111 Mar  3 05:45 queuedata.json
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc       100 Mar  4 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 04:04:02] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 22:57 run_atlas
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc       105 Mar  4 22:57 job.xml
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc      6706 Mar  4 22:57 init_data.xml
[2026-03-05 04:04:02] -rw-r--r--. 2 boinc boinc 222953540 Mar  4 22:57 EVNT.48456315._000003.pool.root.1
[2026-03-05 04:04:02] -rw-r--r--. 2 boinc boinc     15845 Mar  4 22:57 start_atlas.sh
[2026-03-05 04:04:02] drwxrwx--x. 2 boinc boinc      4096 Mar  4 22:57 shared
[2026-03-05 04:04:02] -rw-r--r--. 2 boinc boinc    597963 Mar  4 22:57 input.tar.gz
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc         0 Mar  4 22:57 boinc_lockfile
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc      2613 Mar  4 22:57 pandaJob.out
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc    997757 Mar  4 22:58 agis_schedconf.cvmfs.json
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc       444 Mar  4 22:58 workernode_map.json
[2026-03-05 04:04:02] drwx------. 5 boinc boinc      4096 Mar  4 22:58 pilot3
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc       529 Mar  5 04:02 boinc_task_state.xml
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc 261556710 Mar  5 04:02 HITS.48848904._000055.pool.root.1
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc      1034 Mar  5 04:02 memory_monitor_summary.json
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc   1521291 Mar  5 04:03 agis_ddmendpoints.agis.ALL.json
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc    449499 Mar  5 04:03 log.48848904._000055.job.log.tgz.1
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc      6351 Mar  5 04:03 heartbeat.json
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc        95 Mar  5 04:03 pilot_heartbeat.json
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc      4900 Mar  5 04:03 pilotlog.txt
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc   2541370 Mar  5 04:03 log.48848904._000055.job.log.1
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc       357 Mar  5 04:03 output.list
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc       620 Mar  5 04:03 runtime_log
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc   3010560 Mar  5 04:03 result.tar.gz
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc      9205 Mar  5 04:03 runtime_log.err
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc       665 Mar  5 04:03 HNDLDmsoWH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXXDLDmNUY6in.diag
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc        27 Mar  5 04:03 wrapper_checkpoint.txt
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc      8192 Mar  5 04:04 boinc_mmap_file
[2026-03-05 04:04:02] -rw-r--r--. 1 boinc boinc     20902 Mar  5 04:04 stderr.txt
[2026-03-05 04:04:02] HITS file was successfully produced:
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc 261556710 Mar  5 04:02 shared/HITS.pool.root.1
[2026-03-05 04:04:02]  *** Contents of shared directory: ***
[2026-03-05 04:04:02] total 476708
[2026-03-05 04:04:02] -rw-r--r--. 2 boinc boinc 222953540 Mar  4 22:57 ATLAS.root_0
[2026-03-05 04:04:02] -rw-r--r--. 2 boinc boinc     15845 Mar  4 22:57 start_atlas.sh
[2026-03-05 04:04:02] -rw-r--r--. 2 boinc boinc    597963 Mar  4 22:57 input.tar.gz
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc 261556710 Mar  5 04:02 HITS.pool.root.1
[2026-03-05 04:04:02] -rw-------. 1 boinc boinc   3010560 Mar  5 04:03 result.tar.gz
04:04:03 (388988): run_atlas exited; CPU time 72115.949231
04:04:03 (388988): called boinc_finish(0)

</stderr_txt>
]]>

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