Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:55:54 (1570253): wrapper (7.7.26015): starting
04:55:54 (1570253): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 04:55:54] Arguments: --nthreads 12
[2026-03-03 04:55:54] Threads: 12
[2026-03-03 04:55:54] Checking for CVMFS
[2026-03-03 04:55:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 04:55:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 04:55:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 04:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 04:55:57] 2.13.3.0 1140029 1385 48328 156841 2 50 4133255 6144000 0 130560 0 568574 99.982 50761 857 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 04:55:57] CVMFS is ok
[2026-03-03 04:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 04:55:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 04:55:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 04:55:57] Further information can be found at the LHC@home message board.
[2026-03-03 04:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 04:55:57] Checking for apptainer binary...
[2026-03-03 04:55:57] apptainer is not installed, using version from CVMFS
[2026-03-03 04:55:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 04:55:57] ace
[2026-03-03 04:55:57] apptainer works
[2026-03-03 04:55:57] Set ATHENA_PROC_NUMBER=12
[2026-03-03 04:55:57] Set ATHENA_CORE_NUMBER=12
[2026-03-03 04:55:57] Starting ATLAS job with PandaID=7036159940
[2026-03-03 04:55:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 06:25:34]  *** The last 200 lines of the pilot log: ***
[2026-03-03 06:25:34]  guid=3545172b-06b0-4b60-a19c-d0ac025ecc44
[2026-03-03 06:25:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 06:25:34]  is_altstaged=None
[2026-03-03 06:25:34]  is_tar=False
[2026-03-03 06:25:34]  lfn=log.48852057._000013.job.log.tgz.1
[2026-03-03 06:25:34]  mtime=0
[2026-03-03 06:25:34]  protocol_id=None
[2026-03-03 06:25:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 06:25:34]  replicas=None
[2026-03-03 06:25:34]  scope=mc23_13p6TeV
[2026-03-03 06:25:34]  status=None
[2026-03-03 06:25:34]  status_code=0
[2026-03-03 06:25:34]  storage_token=
[2026-03-03 06:25:34]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-7036159940/log.48852057._000013.job.log.tgz.1
[2026-03-03 06:25:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/e1/log.48852057._000013.job.log.tgz.1
[2026-03-03 06:25:34]  workdir=None
[2026-03-03 06:25:34] ]
[2026-03-03 06:25:34] 2026-03-03 12:24:45,118 | INFO     | transferring file log.48852057._000013.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-7036159940/log.48852057._000013.job.log.tgz.1 to /var/lib/boinc
[2026-03-03 06:25:34] 2026-03-03 12:24:45,119 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-7036159940/log.48852057._000013.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.488520
[2026-03-03 06:25:34] 2026-03-03 12:24:45,142 | INFO     | adding to output.list: log.48852057._000013.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/e1/log.48852057._000013.job.log.tg
[2026-03-03 06:25:34] 2026-03-03 12:24:45,143 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 06:25:34] 2026-03-03 12:24:45,143 | INFO     | summary of transferred files:
[2026-03-03 06:25:34] 2026-03-03 12:24:45,143 | INFO     |  -- lfn=log.48852057._000013.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 06:25:34] 2026-03-03 12:24:45,144 | INFO     | stage-out finished correctly
[2026-03-03 06:25:34] 2026-03-03 12:24:45,234 | INFO     | time since job start (5305s) is within the limit (349056.0s)
[2026-03-03 06:25:34] 2026-03-03 12:24:47,240 | INFO     | time since job start (5307s) is within the limit (349056.0s)
[2026-03-03 06:25:34] 2026-03-03 12:24:47,857 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 06:25:34] 2026-03-03 12:24:48,535 | WARNING  | process 1579002 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 06:25:34] 2026-03-03 12:24:48,536 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036159940/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 06:25:34] 2026-03-03 12:24:48,623 | INFO     | number of running child processes to parent process 1579002: 1
[2026-03-03 06:25:34] 2026-03-03 12:24:48,623 | INFO     | maximum number of monitored processes: 6
[2026-03-03 06:25:34] 2026-03-03 12:24:49,238 | INFO     | job 7036159940 has state=finished
[2026-03-03 06:25:34] 2026-03-03 12:24:49,238 | INFO     | preparing for final server update for job 7036159940 in state='finished'
[2026-03-03 06:25:34] 2026-03-03 12:24:49,239 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036159940/jobReport.json
[2026-03-03 06:25:34] 2026-03-03 12:24:49,240 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-03 06:25:34] 2026-03-03 12:24:49,241 | INFO     | this job has now completed (state=finished)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,241 | INFO     | log transfer has been attempted: DONE
[2026-03-03 06:25:34] 2026-03-03 12:24:49,241 | INFO     | job 7036159940 has finished - writing final server update
[2026-03-03 06:25:34] 2026-03-03 12:24:49,241 | INFO     | total number of processed events: 400 (read)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,243 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036159940/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,243 | INFO     | extracted standard info from prmon json
[2026-03-03 06:25:34] 2026-03-03 12:24:49,243 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 06:25:34] 2026-03-03 12:24:49,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 06:25:34] 2026-03-03 12:24:49,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 06:25:34] 2026-03-03 12:24:49,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 06:25:34] 2026-03-03 12:24:49,245 | INFO     | time since job start (5309s) is within the limit (349056.0s)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,245 | INFO     | fitting pss+swap vs Time
[2026-03-03 06:25:34] 2026-03-03 12:24:49,245 | INFO     | sum of square deviations: 158737860.0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | sum of deviations: -2747183129.0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | mean x: 1772538115.5
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | mean y: 2757794.0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | intersect: 30679036322.707977
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | chi2: 0.06902827129883568
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | current memory leak: -17.31 B/s (using 80 data points, chi2=0.07)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | could have reported an average CPU frequency of 2636 MHz (6 samples)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | ..............................
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | . Timing measurements:
[2026-03-03 06:25:34] 2026-03-03 12:24:49,246 | INFO     | . get job = 0 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,247 | INFO     | . initial setup = 7 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,247 | INFO     | . payload setup = 5 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,247 | INFO     | . stage-in = 0 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,247 | INFO     | . payload execution = 5283 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,247 | INFO     | . stage-out = 0 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,247 | INFO     | . log creation = 0 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,247 | INFO     | ..............................
[2026-03-03 06:25:34] 2026-03-03 12:24:49,777 | INFO     | 
[2026-03-03 06:25:34] 2026-03-03 12:24:49,777 | INFO     | job summary report
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | --------------------------------------------------
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | PanDA job id: 7036159940
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | task id: 48852057
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | errors: (none)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | pilot state: finished 
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | transexitcode: 0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | exeerrorcode: 0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | exeerrordiag: 
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | exitcode: 0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,779 | INFO     | exitmsg: OK
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | cpuconsumptiontime: 59032 s
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | nevents: 400
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | neventsw: 0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | pid: 1579002
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | pgrp: 1579002
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | corecount: 12
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | event service: False
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | sizes: {0: 2287168, 11: 2287168, 5292: 2313765, 5294: 2322777, 5296: 2322833, 5298: 2323027}
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | --------------------------------------------------
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | 
[2026-03-03 06:25:34] 2026-03-03 12:24:49,780 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | job 7036159940 has completed (purged errors)
[2026-03-03 06:25:34] 2026-03-03 12:24:49,813 | INFO     | overall cleanup function is called
[2026-03-03 06:25:34] 2026-03-03 12:24:50,821 | INFO     | --- collectZombieJob: --- 10, [1579002]
[2026-03-03 06:25:34] 2026-03-03 12:24:50,821 | INFO     | zombie collector waiting for pid 1579002
[2026-03-03 06:25:34] 2026-03-03 12:24:50,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 06:25:34] 2026-03-03 12:24:50,822 | INFO     | collected zombie processes
[2026-03-03 06:25:34] 2026-03-03 12:24:50,822 | INFO     | will attempt to kill all subprocesses of pid=1579002
[2026-03-03 06:25:34] 2026-03-03 12:24:50,926 | INFO     | process IDs to be killed: [1579002] (in reverse order)
[2026-03-03 06:25:34] 2026-03-03 12:24:50,986 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 06:25:34] 2026-03-03 12:24:50,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 06:25:34] 2026-03-03 12:24:50,992 | INFO     | did not find any defunct processes belonging to 1579002
[2026-03-03 06:25:34] 2026-03-03 12:24:50,998 | INFO     | did not find any defunct processes belonging to 1579002
[2026-03-03 06:25:34] 2026-03-03 12:24:50,998 | INFO     | ready for new job
[2026-03-03 06:25:34] 2026-03-03 12:24:50,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 06:25:34] 2026-03-03 12:24:51,000 | INFO     | **************************************
[2026-03-03 06:25:34] 2026-03-03 12:24:51,001 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 06:25:34] 2026-03-03 12:24:51,001 | INFO     | **************************************
[2026-03-03 06:25:34] 2026-03-03 12:24:51,001 | INFO     | 
[2026-03-03 06:25:34] 2026-03-03 12:24:51,002 | INFO     | architecture information:
[2026-03-03 06:25:34] 2026-03-03 12:24:51,002 | INFO     | executing command: cat /etc/os-release
[2026-03-03 06:25:34] 2026-03-03 12:24:51,023 | INFO     | cat /etc/os-release:
[2026-03-03 06:25:34] NAME="CentOS Linux"
[2026-03-03 06:25:34] VERSION="7 (Core)"
[2026-03-03 06:25:34] ID="centos"
[2026-03-03 06:25:34] ID_LIKE="rhel fedora"
[2026-03-03 06:25:34] VERSION_ID="7"
[2026-03-03 06:25:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 06:25:34] ANSI_COLOR="0;31"
[2026-03-03 06:25:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 06:25:34] HOME_URL="https://www.centos.org/"
[2026-03-03 06:25:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 06:25:34] 
[2026-03-03 06:25:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 06:25:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 06:25:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 06:25:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 06:25:34] 
[2026-03-03 06:25:34] 2026-03-03 12:24:51,024 | INFO     | **************************************
[2026-03-03 06:25:34] 2026-03-03 12:24:51,526 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-03 06:25:34] 2026-03-03 12:24:51,549 | INFO     | sufficient remaining disk space (13381926912 B)
[2026-03-03 06:25:34] 2026-03-03 12:24:51,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 06:25:34] 2026-03-03 12:24:51,550 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 06:25:34] 2026-03-03 12:24:51,550 | INFO     | update_server=False
[2026-03-03 06:25:34] 2026-03-03 12:24:51,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 06:25:34] 2026-03-03 12:24:51,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 06:25:34] 2026-03-03 12:24:51,661 | INFO     | all data control threads have been joined
[2026-03-03 06:25:34] 2026-03-03 12:24:52,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:25:34] 2026-03-03 12:24:52,129 | INFO     | aborting loop
[2026-03-03 06:25:34] 2026-03-03 12:24:52,541 | INFO     | all job control threads have been joined
[2026-03-03 06:25:34] 2026-03-03 12:24:52,553 | INFO     | [job] retrieve thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:52,556 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:52,581 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:52,665 | INFO     | [data] control thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:52,781 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:52,781 | INFO     | all payload control threads have been joined
[2026-03-03 06:25:34] 2026-03-03 12:24:52,989 | INFO     | [data] copytool_in thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,115 | INFO     | [payload] validate_post thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,133 | INFO     | [job] job monitor thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,425 | INFO     | [payload] failed_post thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,546 | INFO     | [job] control thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,555 | INFO     | [data] copytool_out thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,785 | INFO     | [payload] control thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,861 | INFO     | [job] validate thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:53,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 06:25:34] 2026-03-03 12:24:54,057 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:54,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:25:34] 2026-03-03 12:24:55,313 | INFO     | [job] queue monitor thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:24:57,922 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 06:25:34] 2026-03-03 12:25:22,469 | INFO     | PID=1574445 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 06:25:34] 2026-03-03 12:25:22,469 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 06:25:34] 2026-03-03 12:25:22,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 06:25:34] 2026-03-03 12:25:22,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 06:25:34] 2026-03-03 12:25:28,574 | INFO     | [monitor] cgroup control has ended
[2026-03-03 06:25:34] 2026-03-03 12:25:29,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055752795968)>', '<ExcThread(monitor, started 140055351895808)>']
[2026-03-03 06:25:34] 2026-03-03 12:25:29,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 06:25:34] 2026-03-03 12:25:29,497 | INFO     | [monitor] control thread has ended
[2026-03-03 06:25:34] 2026-03-03 12:25:34,518 | INFO     | all workflow threads have been joined
[2026-03-03 06:25:34] 2026-03-03 12:25:34,518 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 06:25:34] 2026-03-03 12:25:34,518 | INFO     | traces error code: 0
[2026-03-03 06:25:34] 2026-03-03 12:25:34,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 06:25:34] 2026-03-03 12:25:34,765 [wrapper] ==== pilot stdout END ====
[2026-03-03 06:25:34] 2026-03-03 12:25:34,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 06:25:34] 2026-03-03 12:25:34,772 [wrapper] pilotpid: 1574445
[2026-03-03 06:25:34] 2026-03-03 12:25:34,775 [wrapper] Pilot exit status: 0
[2026-03-03 06:25:34] 2026-03-03 12:25:34,787 [wrapper] pandaids: 7036159940
[2026-03-03 06:25:34] 2026-03-03 12:25:34,822 [wrapper] cleanup supervisor_pilot 1597018 1574446
[2026-03-03 06:25:34] 2026-03-03 12:25:34,826 [wrapper] Test setup, not cleaning
[2026-03-03 06:25:34] 2026-03-03 12:25:34,829 [wrapper] apfmon messages muted
[2026-03-03 06:25:34] 2026-03-03 12:25:34,832 [wrapper] ==== wrapper stdout END ====
[2026-03-03 06:25:34] 2026-03-03 12:25:34,835 [wrapper] ==== wrapper stderr END ====
[2026-03-03 06:25:34]  *** Error codes and diagnostics ***
[2026-03-03 06:25:34]     "exeErrorCode": 0,
[2026-03-03 06:25:34]     "exeErrorDiag": "",
[2026-03-03 06:25:34]     "pilotErrorCode": 0,
[2026-03-03 06:25:34]     "pilotErrorDiag": "",
[2026-03-03 06:25:34]  *** Listing of results directory ***
[2026-03-03 06:25:34] total 404992
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc    584627 Mar  2 17:56 pilot3.tar.gz
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc      5111 Mar  2 17:57 queuedata.json
[2026-03-03 06:25:34] -rwx------ 1 boinc boinc     36322 Mar  2 17:58 runpilot2-wrapper.sh
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc       100 Mar  3 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 06:25:34] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 04:55 run_atlas
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc       105 Mar  3 04:55 job.xml
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc      6987 Mar  3 04:55 init_data.xml
[2026-03-03 06:25:34] -rw-r--r-- 2 boinc boinc 239140698 Mar  3 04:55 EVNT.48461663._000001.pool.root.1
[2026-03-03 06:25:34] -rw-r--r-- 2 boinc boinc     15845 Mar  3 04:55 start_atlas.sh
[2026-03-03 06:25:34] drwxrwx--x 2 boinc boinc      4096 Mar  3 04:55 shared
[2026-03-03 06:25:34] -rw-r--r-- 2 boinc boinc    597971 Mar  3 04:55 input.tar.gz
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc         0 Mar  3 04:55 boinc_lockfile
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc      2633 Mar  3 04:55 pandaJob.out
[2026-03-03 06:25:34] -rw------- 1 boinc boinc    998420 Mar  3 04:56 agis_schedconf.cvmfs.json
[2026-03-03 06:25:34] -rw------- 1 boinc boinc   1516104 Mar  3 04:56 agis_ddmendpoints.agis.ALL.json
[2026-03-03 06:25:34] -rw------- 1 boinc boinc       420 Mar  3 04:56 workernode_map.json
[2026-03-03 06:25:34] drwx------ 5 boinc boinc      4096 Mar  3 04:56 pilot3
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc       530 Mar  3 06:24 boinc_task_state.xml
[2026-03-03 06:25:34] -rw------- 1 boinc boinc 169310721 Mar  3 06:24 HITS.48852057._000013.pool.root.1
[2026-03-03 06:25:34] -rw------- 1 boinc boinc        95 Mar  3 06:24 pilot_heartbeat.json
[2026-03-03 06:25:34] -rw------- 1 boinc boinc      1020 Mar  3 06:24 memory_monitor_summary.json
[2026-03-03 06:25:34] -rw------- 1 boinc boinc    397911 Mar  3 06:24 log.48852057._000013.job.log.tgz.1
[2026-03-03 06:25:34] -rw------- 1 boinc boinc      6287 Mar  3 06:24 heartbeat.json
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc      8192 Mar  3 06:25 boinc_mmap_file
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc        27 Mar  3 06:25 wrapper_checkpoint.txt
[2026-03-03 06:25:34] -rw------- 1 boinc boinc      4751 Mar  3 06:25 pilotlog.txt
[2026-03-03 06:25:34] -rw------- 1 boinc boinc    766473 Mar  3 06:25 log.48852057._000013.job.log.1
[2026-03-03 06:25:34] -rw------- 1 boinc boinc       357 Mar  3 06:25 output.list
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc       620 Mar  3 06:25 runtime_log
[2026-03-03 06:25:34] -rw------- 1 boinc boinc   1177600 Mar  3 06:25 result.tar.gz
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc      8867 Mar  3 06:25 runtime_log.err
[2026-03-03 06:25:34] -rw------- 1 boinc boinc       637 Mar  3 06:25 2kPODmpKSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmo3ELDmRbvSWm.diag
[2026-03-03 06:25:34] -rw-r--r-- 1 boinc boinc     21538 Mar  3 06:25 stderr.txt
[2026-03-03 06:25:34] HITS file was successfully produced:
[2026-03-03 06:25:34] -rw------- 1 boinc boinc 169310721 Mar  3 06:24 shared/HITS.pool.root.1
[2026-03-03 06:25:34]  *** Contents of shared directory: ***
[2026-03-03 06:25:34] total 400640
[2026-03-03 06:25:34] -rw-r--r-- 2 boinc boinc 239140698 Mar  3 04:55 ATLAS.root_0
[2026-03-03 06:25:34] -rw-r--r-- 2 boinc boinc     15845 Mar  3 04:55 start_atlas.sh
[2026-03-03 06:25:34] -rw-r--r-- 2 boinc boinc    597971 Mar  3 04:55 input.tar.gz
[2026-03-03 06:25:34] -rw------- 1 boinc boinc 169310721 Mar  3 06:24 HITS.pool.root.1
[2026-03-03 06:25:34] -rw------- 1 boinc boinc   1177600 Mar  3 06:25 result.tar.gz
06:25:36 (1570253): run_atlas exited; CPU time 59100.100511
06:25:36 (1570253): called boinc_finish(0)

</stderr_txt>
]]>

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