Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:44:37 (4079761): wrapper (7.7.26015): starting
15:44:37 (4079761): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 15:44:37] Arguments: --nthreads 4
[2026-03-03 15:44:37] Threads: 4
[2026-03-03 15:44:37] Checking for CVMFS
[2026-03-03 15:44:37] No cvmfs_config command found, will try listing directly
[2026-03-03 15:44:37] CVMFS is ok
[2026-03-03 15:44:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 15:44:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 15:44:37] Further information can be found at the LHC@home message board.
[2026-03-03 15:44:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 15:44:37] Checking for apptainer binary...
[2026-03-03 15:44:37] which: no apptainer in ((null))
[2026-03-03 15:44:37] apptainer is not installed, using version from CVMFS
[2026-03-03 15:44:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 15:44:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-03 15:44:38] apptainer works
[2026-03-03 15:44:38] Set ATHENA_PROC_NUMBER=4
[2026-03-03 15:44:38] Set ATHENA_CORE_NUMBER=4
[2026-03-03 15:44:38] Starting ATLAS job with PandaID=7036159982
[2026-03-03 15:44:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 19:54:15]  *** The last 200 lines of the pilot log: ***
[2026-03-03 19:54:15] 2026-03-03 18:03:46,374 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2343428/.job.ad'
[2026-03-03 19:54:15] 2026-03-03 18:03:46,375 | INFO     | total number of processed events: 400 (read)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,400 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7036159982/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,401 | INFO     | extracted standard info from prmon json
[2026-03-03 19:54:15] 2026-03-03 18:03:46,401 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 19:54:15] 2026-03-03 18:03:46,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 19:54:15] 2026-03-03 18:03:46,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 19:54:15] 2026-03-03 18:03:46,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 19:54:15] 2026-03-03 18:03:46,405 | INFO     | fitting pss+swap vs Time
[2026-03-03 19:54:15] 2026-03-03 18:03:46,406 | INFO     | sum of square deviations: 2299168690.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,407 | INFO     | sum of deviations: 6140517541.999981
[2026-03-03 19:54:15] 2026-03-03 18:03:46,407 | INFO     | mean x: 1772555078.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,407 | INFO     | mean y: 2314461.369230769
[2026-03-03 19:54:15] 2026-03-03 18:03:46,407 | INFO     | intersect: -4731746853.035735
[2026-03-03 19:54:15] 2026-03-03 18:03:46,408 | INFO     | chi2: 2.1248683781241584
[2026-03-03 19:54:15] 2026-03-03 18:03:46,408 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 19:54:15] 2026-03-03 18:03:46,409 | INFO     | sum of deviations: 17686475511.500004
[2026-03-03 19:54:15] 2026-03-03 18:03:46,409 | INFO     | mean x: 1772554925.5
[2026-03-03 19:54:15] 2026-03-03 18:03:46,409 | INFO     | mean y: 2324459.847368421
[2026-03-03 19:54:15] 2026-03-03 18:03:46,410 | INFO     | intersect: -14738229406.1565
[2026-03-03 19:54:15] 2026-03-03 18:03:46,410 | INFO     | chi2: 1.3835821235085963
[2026-03-03 19:54:15] 2026-03-03 18:03:46,410 | INFO     | current chi2=1.3835821235085963 (change=34.88621988294505 %)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,410 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,411 | INFO     | sum of deviations: 17232154984.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,411 | INFO     | mean x: 1772554773.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,412 | INFO     | mean y: 2324036.07027027
[2026-03-03 19:54:15] 2026-03-03 18:03:46,412 | INFO     | intersect: -15555839651.118408
[2026-03-03 19:54:15] 2026-03-03 18:03:46,412 | INFO     | chi2: 1.3845773649568671
[2026-03-03 19:54:15] 2026-03-03 18:03:46,412 | INFO     | current chi2=1.3845773649568671 (change=-0.07193222804490837 %)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,412 | INFO     | right removable region: 184
[2026-03-03 19:54:15] 2026-03-03 18:03:46,412 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 19:54:15] 2026-03-03 18:03:46,414 | INFO     | sum of deviations: -18539861119.5
[2026-03-03 19:54:15] 2026-03-03 18:03:46,414 | INFO     | mean x: 1772555230.5
[2026-03-03 19:54:15] 2026-03-03 18:03:46,414 | INFO     | mean y: 2335998.7421052633
[2026-03-03 19:54:15] 2026-03-03 18:03:46,414 | INFO     | intersect: 15454135219.373518
[2026-03-03 19:54:15] 2026-03-03 18:03:46,414 | INFO     | chi2: 0.7947203777343892
[2026-03-03 19:54:15] 2026-03-03 18:03:46,414 | INFO     | current chi2=0.7947203777343892 (change=62.59907738680872 %)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,415 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,416 | INFO     | sum of deviations: -17077059861.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,416 | INFO     | mean x: 1772555383.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,416 | INFO     | mean y: 2334607.545945946
[2026-03-03 19:54:15] 2026-03-03 18:03:46,416 | INFO     | intersect: 15420474955.793808
[2026-03-03 19:54:15] 2026-03-03 18:03:46,416 | INFO     | chi2: 0.7898604052122099
[2026-03-03 19:54:15] 2026-03-03 18:03:46,416 | INFO     | current chi2=0.7898604052122099 (change=0.6115323903023896 %)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,417 | INFO     | left removable region: 20
[2026-03-03 19:54:15] 2026-03-03 18:03:46,417 | INFO     | sum of square deviations: 1367709365.0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,418 | INFO     | sum of deviations: 1335466930.5000002
[2026-03-03 19:54:15] 2026-03-03 18:03:46,418 | INFO     | mean x: 1772555352.5
[2026-03-03 19:54:15] 2026-03-03 18:03:46,418 | INFO     | mean y: 2338217.81097561
[2026-03-03 19:54:15] 2026-03-03 18:03:46,418 | INFO     | intersect: -1728430844.9164124
[2026-03-03 19:54:15] 2026-03-03 18:03:46,418 | INFO     | chi2: 0.0006698234305527141
[2026-03-03 19:54:15] 2026-03-03 18:03:46,418 | INFO     | current memory leak: 0.98 B/s (using 164 data points, chi2=0.00)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | could have reported an average CPU frequency of 2675 MHz (10 samples)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | ..............................
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | . Timing measurements:
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | . get job = 0 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | . initial setup = 14 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | . payload setup = 15 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | . stage-in = 0 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,419 | INFO     | . payload execution = 11872 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,420 | INFO     | . stage-out = 1 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,420 | INFO     | . log creation = 0 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,420 | INFO     | ..............................
[2026-03-03 19:54:15] 2026-03-03 18:03:46,455 | INFO     | time since job start (11907s) is within the limit (349056.0s)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,811 | INFO     | 
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | job summary report
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | --------------------------------------------------
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | PanDA job id: 7036159982
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | task id: 48852057
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | errors: (none)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | pilot state: finished 
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | transexitcode: 0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | exeerrorcode: 0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,812 | INFO     | exeerrordiag: 
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | exitcode: 0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | exitmsg: OK
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | cpuconsumptiontime: 44558 s
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | nevents: 400
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | neventsw: 0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | pid: 4089989
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | pgrp: 4089989
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | corecount: 4
[2026-03-03 19:54:15] 2026-03-03 18:03:46,813 | INFO     | event service: False
[2026-03-03 19:54:15] 2026-03-03 18:03:46,814 | INFO     | sizes: {0: 2287174, 11: 2287174, 11892: 2317356, 11893: 2326376, 11895: 2326626}
[2026-03-03 19:54:15] 2026-03-03 18:03:46,814 | INFO     | --------------------------------------------------
[2026-03-03 19:54:15] 2026-03-03 18:03:46,814 | INFO     | 
[2026-03-03 19:54:15] 2026-03-03 18:03:46,814 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,847 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 19:54:15] 2026-03-03 18:03:46,848 | INFO     | job 7036159982 has completed (purged errors)
[2026-03-03 19:54:15] 2026-03-03 18:03:46,848 | INFO     | overall cleanup function is called
[2026-03-03 19:54:15] 2026-03-03 18:03:47,856 | INFO     | --- collectZombieJob: --- 10, [4089989]
[2026-03-03 19:54:15] 2026-03-03 18:03:47,857 | INFO     | zombie collector waiting for pid 4089989
[2026-03-03 19:54:15] 2026-03-03 18:03:47,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 19:54:15] 2026-03-03 18:03:47,857 | INFO     | collected zombie processes
[2026-03-03 19:54:15] 2026-03-03 18:03:47,857 | INFO     | will attempt to kill all subprocesses of pid=4089989
[2026-03-03 19:54:15] 2026-03-03 18:03:48,660 | INFO     | process IDs to be killed: [4089989] (in reverse order)
[2026-03-03 19:54:15] 2026-03-03 18:03:48,998 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 19:54:15] 2026-03-03 18:03:48,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 19:54:15] 2026-03-03 18:03:49,029 | INFO     | did not find any defunct processes belonging to 4089989
[2026-03-03 19:54:15] 2026-03-03 18:03:49,057 | INFO     | did not find any defunct processes belonging to 4089989
[2026-03-03 19:54:15] 2026-03-03 18:03:49,057 | INFO     | ready for new job
[2026-03-03 19:54:15] 2026-03-03 18:03:49,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 19:54:15] 2026-03-03 18:03:49,060 | INFO     | **************************************
[2026-03-03 19:54:15] 2026-03-03 18:03:49,061 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 19:54:15] 2026-03-03 18:03:49,061 | INFO     | **************************************
[2026-03-03 19:54:15] 2026-03-03 18:03:49,061 | INFO     | 
[2026-03-03 19:54:15] 2026-03-03 18:03:49,069 | INFO     | architecture information:
[2026-03-03 19:54:15] 2026-03-03 18:03:49,070 | INFO     | executing command: cat /etc/os-release
[2026-03-03 19:54:15] 2026-03-03 18:03:49,095 | INFO     | cat /etc/os-release:
[2026-03-03 19:54:15] NAME="CentOS Linux"
[2026-03-03 19:54:15] VERSION="7 (Core)"
[2026-03-03 19:54:15] ID="centos"
[2026-03-03 19:54:15] ID_LIKE="rhel fedora"
[2026-03-03 19:54:15] VERSION_ID="7"
[2026-03-03 19:54:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 19:54:15] ANSI_COLOR="0;31"
[2026-03-03 19:54:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 19:54:15] HOME_URL="https://www.centos.org/"
[2026-03-03 19:54:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 19:54:15] 
[2026-03-03 19:54:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 19:54:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 19:54:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 19:54:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 19:54:15] 
[2026-03-03 19:54:15] 2026-03-03 18:03:49,095 | INFO     | **************************************
[2026-03-03 19:54:15] 2026-03-03 18:03:49,598 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2026-03-03 19:54:15] 2026-03-03 18:03:49,624 | INFO     | sufficient remaining disk space (3321871990784 B)
[2026-03-03 19:54:15] 2026-03-03 18:03:49,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 19:54:15] 2026-03-03 18:03:49,625 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 19:54:15] 2026-03-03 18:03:49,625 | INFO     | update_server=False
[2026-03-03 19:54:15] 2026-03-03 18:03:49,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 19:54:15] 2026-03-03 18:03:49,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:54:15] 2026-03-03 18:03:49,663 | INFO     | aborting loop
[2026-03-03 19:54:15] 2026-03-03 18:03:49,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 19:54:15] 2026-03-03 18:03:49,896 | INFO     | all job control threads have been joined
[2026-03-03 19:54:15] 2026-03-03 18:03:50,051 | INFO     | all payload control threads have been joined
[2026-03-03 19:54:15] 2026-03-03 18:03:50,252 | INFO     | all data control threads have been joined
[2026-03-03 19:54:15] 2026-03-03 18:03:50,631 | INFO     | [job] retrieve thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:50,668 | INFO     | [job] job monitor thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:50,902 | INFO     | [job] control thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:50,962 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:51,044 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:51,056 | INFO     | [payload] control thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:51,226 | INFO     | [data] copytool_in thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:51,257 | INFO     | [data] control thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:51,399 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:51,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:54:15] 2026-03-03 18:03:51,728 | INFO     | [data] copytool_out thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:51,891 | INFO     | [job] validate thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:52,024 | INFO     | [payload] validate_post thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:52,197 | INFO     | [payload] failed_post thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:52,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 19:54:15] 2026-03-03 18:03:52,536 | INFO     | [job] queue monitor thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:03:56,357 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:04:00,528 | INFO     | job.realtimelogging is not enabled
[2026-03-03 19:54:15] 2026-03-03 18:04:01,533 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 19:54:15] 2026-03-03 18:04:20,538 | INFO     | PID=4084612 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 19:54:15] 2026-03-03 18:04:20,538 | INFO     | .. there are 18 such processes running
[2026-03-03 19:54:15] 2026-03-03 18:04:20,538 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 19:54:15] 2026-03-03 18:04:20,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 19:54:15] 2026-03-03 18:04:20,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 19:54:15] 2026-03-03 18:04:39,223 | INFO     | [monitor] cgroup control has ended
[2026-03-03 19:54:15] 2026-03-03 18:04:40,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22930459055936)>', '<ExcThread(monitor, started 22930138289920)>']
[2026-03-03 19:54:15] 2026-03-03 18:04:41,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 19:54:15] 2026-03-03 18:04:41,643 | INFO     | [monitor] control thread has ended
[2026-03-03 19:54:15] 2026-03-03 18:04:45,794 | INFO     | all workflow threads have been joined
[2026-03-03 19:54:15] 2026-03-03 18:04:45,795 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 19:54:15] 2026-03-03 18:04:45,795 | INFO     | traces error code: 0
[2026-03-03 19:54:15] 2026-03-03 18:04:45,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 19:54:15] 2026-03-03 18:04:45,938 [wrapper] ==== pilot stdout END ====
[2026-03-03 19:54:15] 2026-03-03 18:04:45,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 19:54:15] 2026-03-03 18:04:45,946 [wrapper] pilotpid: 4084612
[2026-03-03 19:54:15] 2026-03-03 18:04:45,950 [wrapper] Pilot exit status: 0
[2026-03-03 19:54:15] 2026-03-03 18:04:45,965 [wrapper] pandaids: 7036159982
[2026-03-03 19:54:15] 2026-03-03 18:04:46,165 [wrapper] cleanup supervisor_pilot  187772 4084613
[2026-03-03 19:54:15] 2026-03-03 18:04:46,170 [wrapper] Test setup, not cleaning
[2026-03-03 19:54:15] 2026-03-03 18:04:46,174 [wrapper] apfmon messages muted
[2026-03-03 19:54:15] 2026-03-03 18:04:46,178 [wrapper] ==== wrapper stdout END ====
[2026-03-03 19:54:15] 2026-03-03 18:04:46,182 [wrapper] ==== wrapper stderr END ====
[2026-03-03 19:54:15]  *** Error codes and diagnostics ***
[2026-03-03 19:54:15]     "exeErrorCode": 0,
[2026-03-03 19:54:15]     "exeErrorDiag": "",
[2026-03-03 19:54:15]     "pilotErrorCode": 0,
[2026-03-03 19:54:15]     "pilotErrorDiag": "",
[2026-03-03 19:54:15]  *** Listing of results directory ***
[2026-03-03 19:54:15] total 411988
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc    584627 Mar  3 00:56 pilot3.tar.gz
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc      5111 Mar  3 00:57 queuedata.json
[2026-03-03 19:54:15] -rwx------ 1 boinc boinc     36322 Mar  3 00:58 runpilot2-wrapper.sh
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc       100 Mar  3 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 19:54:15] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 15:44 run_atlas
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc       105 Mar  3 15:44 job.xml
[2026-03-03 19:54:15] -rw-r--r-- 2 boinc boinc 237766761 Mar  3 15:44 EVNT.48461663._000003.pool.root.1
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc      6698 Mar  3 15:44 init_data.xml
[2026-03-03 19:54:15] -rw-r--r-- 2 boinc boinc     15845 Mar  3 15:44 start_atlas.sh
[2026-03-03 19:54:15] drwxrwx--x 2 boinc boinc      4096 Mar  3 15:44 shared
[2026-03-03 19:54:15] -rw-r--r-- 2 boinc boinc    597977 Mar  3 15:44 input.tar.gz
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc         0 Mar  3 15:44 boinc_lockfile
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc      2634 Mar  3 15:44 pandaJob.out
[2026-03-03 19:54:15] -rw------- 1 boinc boinc    998442 Mar  3 15:45 agis_schedconf.cvmfs.json
[2026-03-03 19:54:15] -rw------- 1 boinc boinc       443 Mar  3 15:45 workernode_map.json
[2026-03-03 19:54:15] drwx------ 5 boinc boinc      4096 Mar  3 15:45 pilot3
[2026-03-03 19:54:15] -rw------- 1 boinc boinc 176191859 Mar  3 19:03 HITS.48852057._000055.pool.root.1
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc       529 Mar  3 19:03 boinc_task_state.xml
[2026-03-03 19:54:15] -rw------- 1 boinc boinc        95 Mar  3 19:03 pilot_heartbeat.json
[2026-03-03 19:54:15] -rw------- 1 boinc boinc      1024 Mar  3 19:03 memory_monitor_summary.json
[2026-03-03 19:54:15] -rw------- 1 boinc boinc   1516092 Mar  3 19:03 agis_ddmendpoints.agis.ALL.json
[2026-03-03 19:54:15] -rw------- 1 boinc boinc    356904 Mar  3 19:03 log.48852057._000055.job.log.tgz.1
[2026-03-03 19:54:15] -rw------- 1 boinc boinc      6337 Mar  3 19:03 heartbeat.json
[2026-03-03 19:54:15] -rw------- 1 boinc boinc      4904 Mar  3 19:04 pilotlog.txt
[2026-03-03 19:54:15] -rw------- 1 boinc boinc   1635740 Mar  3 19:04 log.48852057._000055.job.log.1
[2026-03-03 19:54:15] -rw------- 1 boinc boinc       357 Mar  3 19:04 output.list
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc       620 Mar  3 19:04 runtime_log
[2026-03-03 19:54:15] -rw------- 1 boinc boinc   2007040 Mar  3 19:04 result.tar.gz
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc      9205 Mar  3 19:04 runtime_log.err
[2026-03-03 19:54:15] -rw------- 1 boinc boinc       666 Mar  3 19:04 SZELDmqKSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmO4ELDmJOmJLo.diag
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc        26 Mar  3 19:53 wrapper_checkpoint.txt
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc      8192 Mar  3 19:54 boinc_mmap_file
[2026-03-03 19:54:15] -rw-r--r-- 1 boinc boinc     20872 Mar  3 19:54 stderr.txt
[2026-03-03 19:54:15] HITS file was successfully produced:
[2026-03-03 19:54:15] -rw------- 1 boinc boinc 176191859 Mar  3 19:03 shared/HITS.pool.root.1
[2026-03-03 19:54:15]  *** Contents of shared directory: ***
[2026-03-03 19:54:15] total 406828
[2026-03-03 19:54:15] -rw-r--r-- 2 boinc boinc 237766761 Mar  3 15:44 ATLAS.root_0
[2026-03-03 19:54:15] -rw-r--r-- 2 boinc boinc     15845 Mar  3 15:44 start_atlas.sh
[2026-03-03 19:54:15] -rw-r--r-- 2 boinc boinc    597977 Mar  3 15:44 input.tar.gz
[2026-03-03 19:54:15] -rw------- 1 boinc boinc 176191859 Mar  3 19:03 HITS.pool.root.1
[2026-03-03 19:54:15] -rw------- 1 boinc boinc   2007040 Mar  3 19:04 result.tar.gz
19:54:16 (4079761): run_atlas exited; CPU time 45331.091960
19:54:16 (4079761): called boinc_finish(0)

</stderr_txt>
]]>

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