Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:34:12 (2816242): wrapper (7.7.26015): starting
10:34:12 (2816242): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 10:34:12] Arguments: --nthreads 12
[2026-03-03 10:34:12] Threads: 12
[2026-03-03 10:34:12] Checking for CVMFS
[2026-03-03 10:34:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 10:34:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 10:34:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 10:34:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 10:34:12] 2.13.3.0 8852 31141 217548 156839 3 188 36517249 46080001 5626 130560 0 103955213 99.811 49354483 25340 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-03 10:34:12] CVMFS is ok
[2026-03-03 10:34:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 10:34:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 10:34:12] Further information can be found at the LHC@home message board.
[2026-03-03 10:34:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 10:34:12] Checking for apptainer binary...
[2026-03-03 10:34:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 10:34:12] Running /usr/bin/apptainer --version
[2026-03-03 10:34:12] apptainer version 1.4.5-2.el9
[2026-03-03 10:34:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 10:34:13] mff2103.farm.particle.cz
[2026-03-03 10:34:13] apptainer works
[2026-03-03 10:34:13] Set ATHENA_PROC_NUMBER=12
[2026-03-03 10:34:13] Set ATHENA_CORE_NUMBER=12
[2026-03-03 10:34:13] Starting ATLAS job with PandaID=7036125121
[2026-03-03 10:34:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 12:40:49]  *** The last 200 lines of the pilot log: ***
[2026-03-03 12:40:49] 2026-03-03 11:39:53,786 | INFO     | reading metadata from: /scratch/.boinc/slots/2/PanDA_Pilot-7036125121/jobReport.json
[2026-03-03 12:40:49] 2026-03-03 11:39:53,788 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/2/workernode_map.json
[2026-03-03 12:40:49] 2026-03-03 11:39:53,788 | INFO     | this job has now completed (state=finished)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,789 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,789 | INFO     | log transfer has been attempted: DONE
[2026-03-03 12:40:49] 2026-03-03 11:39:53,789 | INFO     | job 7036125121 has finished - writing final server update
[2026-03-03 12:40:49] 2026-03-03 11:39:53,789 | INFO     | total number of processed events: 400 (read)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,799 | INFO     | monitor loop #543: job 0:7036125121 is in state 'finished'
[2026-03-03 12:40:49] 2026-03-03 11:39:53,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,807 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-7036125121/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,808 | INFO     | extracted standard info from prmon json
[2026-03-03 12:40:49] 2026-03-03 11:39:53,808 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 12:40:49] 2026-03-03 11:39:53,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 12:40:49] 2026-03-03 11:39:53,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 12:40:49] 2026-03-03 11:39:53,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 12:40:49] 2026-03-03 11:39:53,811 | INFO     | fitting pss+swap vs Time
[2026-03-03 12:40:49] 2026-03-03 11:39:53,811 | INFO     | sum of square deviations: 576985702.0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,812 | INFO     | sum of deviations: 16728438333.999996
[2026-03-03 12:40:49] 2026-03-03 11:39:53,812 | INFO     | mean x: 1772534218.0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,812 | INFO     | mean y: 2667926.2845528456
[2026-03-03 12:40:49] 2026-03-03 11:39:53,812 | INFO     | intersect: -51388084492.59931
[2026-03-03 12:40:49] 2026-03-03 11:39:53,812 | INFO     | chi2: 1.447456873490648
[2026-03-03 12:40:49] 2026-03-03 11:39:53,813 | INFO     | sum of square deviations: 509440249.5
[2026-03-03 12:40:49] 2026-03-03 11:39:53,813 | INFO     | sum of deviations: 16049704753.999998
[2026-03-03 12:40:49] 2026-03-03 11:39:53,813 | INFO     | mean x: 1772534065.5
[2026-03-03 12:40:49] 2026-03-03 11:39:53,814 | INFO     | mean y: 2666393.8305084747
[2026-03-03 12:40:49] 2026-03-03 11:39:53,814 | INFO     | intersect: -55840287604.4132
[2026-03-03 12:40:49] 2026-03-03 11:39:53,814 | INFO     | chi2: 1.4495093172275826
[2026-03-03 12:40:49] 2026-03-03 11:39:53,814 | INFO     | current chi2=1.4495093172275826 (change=-0.141796538088548 %)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,814 | INFO     | right removable region: 117
[2026-03-03 12:40:49] 2026-03-03 11:39:53,814 | INFO     | sum of square deviations: 509440249.5
[2026-03-03 12:40:49] 2026-03-03 11:39:53,815 | INFO     | sum of deviations: -4203631969.499999
[2026-03-03 12:40:49] 2026-03-03 11:39:53,815 | INFO     | mean x: 1772534370.5
[2026-03-03 12:40:49] 2026-03-03 11:39:53,815 | INFO     | mean y: 2714463.3305084747
[2026-03-03 12:40:49] 2026-03-03 11:39:53,815 | INFO     | intersect: 14628732243.01
[2026-03-03 12:40:49] 2026-03-03 11:39:53,815 | INFO     | chi2: 0.010567623951326795
[2026-03-03 12:40:49] 2026-03-03 11:39:53,815 | INFO     | current chi2=0.010567623951326795 (change=99.26991787148434 %)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,816 | INFO     | sum of square deviations: 447383272.0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,816 | INFO     | sum of deviations: -4460148590.000001
[2026-03-03 12:40:49] 2026-03-03 11:39:53,816 | INFO     | mean x: 1772534523.0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,816 | INFO     | mean y: 2715066.0442477874
[2026-03-03 12:40:49] 2026-03-03 11:39:53,816 | INFO     | intersect: 17673843711.83048
[2026-03-03 12:40:49] 2026-03-03 11:39:53,817 | INFO     | chi2: 0.008666679955827145
[2026-03-03 12:40:49] 2026-03-03 11:39:53,817 | INFO     | current chi2=0.008666679955827145 (change=17.988376613845926 %)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,817 | INFO     | left removable region: 20
[2026-03-03 12:40:49] 2026-03-03 11:39:53,817 | INFO     | sum of square deviations: 282974608.0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,818 | INFO     | sum of deviations: -2550778623.0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,818 | INFO     | mean x: 1772534645.0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,818 | INFO     | mean y: 2710320.5773195876
[2026-03-03 12:40:49] 2026-03-03 11:39:53,818 | INFO     | intersect: 15980622660.305323
[2026-03-03 12:40:49] 2026-03-03 11:39:53,818 | INFO     | chi2: 0.007224309190293938
[2026-03-03 12:40:49] 2026-03-03 11:39:53,818 | INFO     | current memory leak: -9.01 B/s (using 97 data points, chi2=0.01)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | could have reported an average CPU frequency of 2753 MHz (8 samples)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | ..............................
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . Timing measurements:
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . get job = 0 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . initial setup = 7 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . payload setup = 7 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . stage-in = 0 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . payload execution = 7495 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . stage-out = 0 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,819 | INFO     | . log creation = 0 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,820 | INFO     | ..............................
[2026-03-03 12:40:49] 2026-03-03 11:39:53,911 | INFO     | 
[2026-03-03 12:40:49] 2026-03-03 11:39:53,911 | INFO     | job summary report
[2026-03-03 12:40:49] 2026-03-03 11:39:53,911 | INFO     | --------------------------------------------------
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | PanDA job id: 7036125121
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | task id: 48849047
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | errors: (none)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | pilot state: finished 
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | transexitcode: 0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | exeerrorcode: 0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | exeerrordiag: 
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | exitcode: 0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | exitmsg: OK
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | cpuconsumptiontime: 83133 s
[2026-03-03 12:40:49] 2026-03-03 11:39:53,912 | INFO     | nevents: 400
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | neventsw: 0
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | pid: 2826668
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | pgrp: 2826668
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | corecount: 12
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | event service: False
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | sizes: {0: 2281970, 1: 2282431, 11: 2282431, 7507: 2310133, 7508: 2319189, 7511: 2319327}
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | --------------------------------------------------
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | 
[2026-03-03 12:40:49] 2026-03-03 11:39:53,913 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2026-03-03 12:40:49] 2026-03-03 11:39:53,943 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,943 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,943 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,943 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,945 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,945 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 12:40:49] 2026-03-03 11:39:53,945 | INFO     | job 7036125121 has completed (purged errors)
[2026-03-03 12:40:49] 2026-03-03 11:39:53,945 | INFO     | overall cleanup function is called
[2026-03-03 12:40:49] 2026-03-03 11:39:54,955 | INFO     | --- collectZombieJob: --- 10, [2826668]
[2026-03-03 12:40:49] 2026-03-03 11:39:54,956 | INFO     | zombie collector waiting for pid 2826668
[2026-03-03 12:40:49] 2026-03-03 11:39:54,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 12:40:49] 2026-03-03 11:39:54,956 | INFO     | collected zombie processes
[2026-03-03 12:40:49] 2026-03-03 11:39:54,956 | INFO     | will attempt to kill all subprocesses of pid=2826668
[2026-03-03 12:40:49] 2026-03-03 11:39:55,302 | INFO     | process IDs to be killed: [2826668] (in reverse order)
[2026-03-03 12:40:49] 2026-03-03 11:39:55,496 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 12:40:49] 2026-03-03 11:39:55,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 12:40:49] 2026-03-03 11:39:55,509 | INFO     | did not find any defunct processes belonging to 2826668
[2026-03-03 12:40:49] 2026-03-03 11:39:55,519 | INFO     | did not find any defunct processes belonging to 2826668
[2026-03-03 12:40:49] 2026-03-03 11:39:55,519 | INFO     | ready for new job
[2026-03-03 12:40:49] 2026-03-03 11:39:55,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 12:40:49] 2026-03-03 11:39:55,521 | INFO     | **************************************
[2026-03-03 12:40:49] 2026-03-03 11:39:55,521 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 12:40:49] 2026-03-03 11:39:55,521 | INFO     | **************************************
[2026-03-03 12:40:49] 2026-03-03 11:39:55,522 | INFO     | 
[2026-03-03 12:40:49] 2026-03-03 11:39:55,528 | INFO     | architecture information:
[2026-03-03 12:40:49] 2026-03-03 11:39:55,528 | INFO     | executing command: cat /etc/os-release
[2026-03-03 12:40:49] 2026-03-03 11:39:55,547 | INFO     | cat /etc/os-release:
[2026-03-03 12:40:49] NAME="CentOS Linux"
[2026-03-03 12:40:49] VERSION="7 (Core)"
[2026-03-03 12:40:49] ID="centos"
[2026-03-03 12:40:49] ID_LIKE="rhel fedora"
[2026-03-03 12:40:49] VERSION_ID="7"
[2026-03-03 12:40:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 12:40:49] ANSI_COLOR="0;31"
[2026-03-03 12:40:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 12:40:49] HOME_URL="https://www.centos.org/"
[2026-03-03 12:40:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 12:40:49] 
[2026-03-03 12:40:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 12:40:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 12:40:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 12:40:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 12:40:49] 
[2026-03-03 12:40:49] 2026-03-03 11:39:55,547 | INFO     | **************************************
[2026-03-03 12:40:49] 2026-03-03 11:39:56,050 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2026-03-03 12:40:49] 2026-03-03 11:39:56,077 | INFO     | sufficient remaining disk space (1680093478912 B)
[2026-03-03 12:40:49] 2026-03-03 11:39:56,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 12:40:49] 2026-03-03 11:39:56,078 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 12:40:49] 2026-03-03 11:39:56,078 | INFO     | update_server=False
[2026-03-03 12:40:49] 2026-03-03 11:39:56,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 12:40:49] 2026-03-03 11:39:56,302 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 12:40:49] 2026-03-03 11:39:56,303 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 12:40:49] 2026-03-03 11:39:56,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:40:49] 2026-03-03 11:39:56,303 | INFO     | will abort loop
[2026-03-03 12:40:49] 2026-03-03 11:39:56,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 12:40:49] 2026-03-03 11:39:56,516 | INFO     | all payload control threads have been joined
[2026-03-03 12:40:49] 2026-03-03 11:39:57,017 | INFO     | all data control threads have been joined
[2026-03-03 12:40:49] 2026-03-03 11:39:57,034 | INFO     | all job control threads have been joined
[2026-03-03 12:40:49] 2026-03-03 11:39:57,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 12:40:49] 2026-03-03 11:39:57,083 | INFO     | [job] retrieve thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:57,156 | INFO     | [data] copytool_in thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:57,308 | INFO     | [job] job monitor thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:57,474 | INFO     | [payload] validate_post thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:57,521 | INFO     | [payload] control thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:57,545 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:57,700 | INFO     | [job] validate thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:57,794 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:58,023 | INFO     | [data] control thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:58,039 | INFO     | [job] control thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:58,101 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:58,474 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:58,485 | INFO     | [data] copytool_out thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:58,516 | INFO     | [payload] failed_post thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:39:58,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:40:49] 2026-03-03 11:39:59,928 | INFO     | [job] queue monitor thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:40:01,077 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 12:40:49] 2026-03-03 11:40:26,065 | INFO     | PID=2820465 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 12:40:49] 2026-03-03 11:40:26,065 | INFO     | .. there are 8 such processes running
[2026-03-03 12:40:49] 2026-03-03 11:40:26,067 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 12:40:49] 2026-03-03 11:40:26,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 12:40:49] 2026-03-03 11:40:26,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 12:40:49] 2026-03-03 11:40:43,919 | INFO     | [monitor] cgroup control has ended
[2026-03-03 12:40:49] 2026-03-03 11:40:44,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869273954112)>', '<ExcThread(monitor, started 139868923471616)>']
[2026-03-03 12:40:49] 2026-03-03 11:40:45,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 12:40:49] 2026-03-03 11:40:45,162 | INFO     | [monitor] control thread has ended
[2026-03-03 12:40:49] 2026-03-03 11:40:49,366 | INFO     | all workflow threads have been joined
[2026-03-03 12:40:49] 2026-03-03 11:40:49,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 12:40:49] 2026-03-03 11:40:49,367 | INFO     | traces error code: 0
[2026-03-03 12:40:49] 2026-03-03 11:40:49,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 12:40:49] 2026-03-03 11:40:49,488 [wrapper] ==== pilot stdout END ====
[2026-03-03 12:40:49] 2026-03-03 11:40:49,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 12:40:49] 2026-03-03 11:40:49,495 [wrapper] pilotpid: 2820465
[2026-03-03 12:40:49] 2026-03-03 11:40:49,499 [wrapper] Pilot exit status: 0
[2026-03-03 12:40:49] 2026-03-03 11:40:49,513 [wrapper] pandaids: 7036125121
[2026-03-03 12:40:49] 2026-03-03 11:40:49,597 [wrapper] cleanup supervisor_pilot 3017688 2820466
[2026-03-03 12:40:49] 2026-03-03 11:40:49,600 [wrapper] Test setup, not cleaning
[2026-03-03 12:40:49] 2026-03-03 11:40:49,604 [wrapper] apfmon messages muted
[2026-03-03 12:40:49] 2026-03-03 11:40:49,608 [wrapper] ==== wrapper stdout END ====
[2026-03-03 12:40:49] 2026-03-03 11:40:49,612 [wrapper] ==== wrapper stderr END ====
[2026-03-03 12:40:49]  *** Error codes and diagnostics ***
[2026-03-03 12:40:49]     "exeErrorCode": 0,
[2026-03-03 12:40:49]     "exeErrorDiag": "",
[2026-03-03 12:40:49]     "pilotErrorCode": 0,
[2026-03-03 12:40:49]     "pilotErrorDiag": "",
[2026-03-03 12:40:49]  *** Listing of results directory ***
[2026-03-03 12:40:49] total 456184
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc    584627 Mar  2 23:33 pilot3.tar.gz
[2026-03-03 12:40:49] -rwx------ 1 boinc boinc     36322 Mar  2 23:36 runpilot2-wrapper.sh
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc      5111 Mar  2 23:38 queuedata.json
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc       100 Mar  3 10:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 12:40:49] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 10:34 run_atlas
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc       105 Mar  3 10:34 job.xml
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc      6677 Mar  3 10:34 init_data.xml
[2026-03-03 12:40:49] -rw-r--r-- 2 boinc boinc 245161991 Mar  3 10:34 EVNT.48456503._000003.pool.root.1
[2026-03-03 12:40:49] -rw-r--r-- 2 boinc boinc     15845 Mar  3 10:34 start_atlas.sh
[2026-03-03 12:40:49] drwxrwx--x 2 boinc boinc      4096 Mar  3 10:34 shared
[2026-03-03 12:40:49] -rw-r--r-- 2 boinc boinc    597991 Mar  3 10:34 input.tar.gz
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc         0 Mar  3 10:34 boinc_lockfile
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc      2676 Mar  3 10:34 pandaJob.out
[2026-03-03 12:40:49] -rw------- 1 boinc boinc    998412 Mar  3 10:34 agis_schedconf.cvmfs.json
[2026-03-03 12:40:49] -rw------- 1 boinc boinc   1512931 Mar  3 10:34 agis_ddmendpoints.agis.ALL.json
[2026-03-03 12:40:49] -rw------- 1 boinc boinc       435 Mar  3 10:34 workernode_map.json
[2026-03-03 12:40:49] drwx------ 5 boinc boinc      4096 Mar  3 10:34 pilot3
[2026-03-03 12:40:49] -rw------- 1 boinc boinc 215023526 Mar  3 12:39 HITS.48849047._000067.pool.root.1
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc       529 Mar  3 12:39 boinc_task_state.xml
[2026-03-03 12:40:49] -rw------- 1 boinc boinc      1024 Mar  3 12:39 memory_monitor_summary.json
[2026-03-03 12:40:49] -rw------- 1 boinc boinc    434943 Mar  3 12:39 log.48849047._000067.job.log.tgz.1
[2026-03-03 12:40:49] -rw------- 1 boinc boinc      6328 Mar  3 12:39 heartbeat.json
[2026-03-03 12:40:49] -rw------- 1 boinc boinc        95 Mar  3 12:40 pilot_heartbeat.json
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc        27 Mar  3 12:40 wrapper_checkpoint.txt
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc      8192 Mar  3 12:40 boinc_mmap_file
[2026-03-03 12:40:49] -rw------- 1 boinc boinc      5008 Mar  3 12:40 pilotlog.txt
[2026-03-03 12:40:49] -rw------- 1 boinc boinc   1070171 Mar  3 12:40 log.48849047._000067.job.log.1
[2026-03-03 12:40:49] -rw------- 1 boinc boinc       357 Mar  3 12:40 output.list
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc       620 Mar  3 12:40 runtime_log
[2026-03-03 12:40:49] -rw------- 1 boinc boinc   1525760 Mar  3 12:40 result.tar.gz
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc      8879 Mar  3 12:40 runtime_log.err
[2026-03-03 12:40:49] -rw------- 1 boinc boinc       664 Mar  3 12:40 5T6MDmW3QH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmyCLDmtSn8gm.diag
[2026-03-03 12:40:49] -rw-r--r-- 1 boinc boinc     21295 Mar  3 12:40 stderr.txt
[2026-03-03 12:40:49] HITS file was successfully produced:
[2026-03-03 12:40:49] -rw------- 1 boinc boinc 215023526 Mar  3 12:39 shared/HITS.pool.root.1
[2026-03-03 12:40:49]  *** Contents of shared directory: ***
[2026-03-03 12:40:49] total 451504
[2026-03-03 12:40:49] -rw-r--r-- 2 boinc boinc 245161991 Mar  3 10:34 ATLAS.root_0
[2026-03-03 12:40:49] -rw-r--r-- 2 boinc boinc     15845 Mar  3 10:34 start_atlas.sh
[2026-03-03 12:40:49] -rw-r--r-- 2 boinc boinc    597991 Mar  3 10:34 input.tar.gz
[2026-03-03 12:40:49] -rw------- 1 boinc boinc 215023526 Mar  3 12:39 HITS.pool.root.1
[2026-03-03 12:40:49] -rw------- 1 boinc boinc   1525760 Mar  3 12:40 result.tar.gz
12:40:51 (2816242): run_atlas exited; CPU time 83345.111494
12:40:51 (2816242): called boinc_finish(0)

</stderr_txt>
]]>

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