Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:25 (1418792): wrapper (7.7.26015): starting
13:23:25 (1418792): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 13:23:25] Arguments: --nthreads 4
[2026-03-03 13:23:25] Threads: 4
[2026-03-03 13:23:25] Checking for CVMFS
[2026-03-03 13:23:25] No cvmfs_config command found, will try listing directly
[2026-03-03 13:23:25] CVMFS is ok
[2026-03-03 13:23:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 13:23:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 13:23:25] Further information can be found at the LHC@home message board.
[2026-03-03 13:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 13:23:25] Checking for apptainer binary...
[2026-03-03 13:23:25] which: no apptainer in ((null))
[2026-03-03 13:23:25] apptainer is not installed, using version from CVMFS
[2026-03-03 13:23:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 13:23:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-03 13:23:25] apptainer works
[2026-03-03 13:23:25] Set ATHENA_PROC_NUMBER=4
[2026-03-03 13:23:25] Set ATHENA_CORE_NUMBER=4
[2026-03-03 13:23:25] Starting ATLAS job with PandaID=7036136299
[2026-03-03 13:23:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 17:15:15]  *** The last 200 lines of the pilot log: ***
[2026-03-03 17:15:15] 2026-03-03 16:14:14,834 | INFO     | sum of square deviations: 3626986925.982398
[2026-03-03 17:15:15] 2026-03-03 16:14:14,836 | INFO     | sum of deviations: -60949055359.72246
[2026-03-03 17:15:15] 2026-03-03 16:14:14,836 | INFO     | mean x: 1772547545.0088105
[2026-03-03 17:15:15] 2026-03-03 16:14:14,836 | INFO     | mean y: 2395133.3612334803
[2026-03-03 17:15:15] 2026-03-03 16:14:14,836 | INFO     | intersect: 29788854432.279156
[2026-03-03 17:15:15] 2026-03-03 16:14:14,836 | INFO     | chi2: 2.3748044475851193
[2026-03-03 17:15:15] 2026-03-03 16:14:14,837 | INFO     | sum of square deviations: 3392555233.481972
[2026-03-03 17:15:15] 2026-03-03 16:14:14,838 | INFO     | sum of deviations: -45010328666.027016
[2026-03-03 17:15:15] 2026-03-03 16:14:14,838 | INFO     | mean x: 1772547392.5090091
[2026-03-03 17:15:15] 2026-03-03 16:14:14,838 | INFO     | mean y: 2405334.5135135134
[2026-03-03 17:15:15] 2026-03-03 16:14:14,838 | INFO     | intersect: 23519469972.265606
[2026-03-03 17:15:15] 2026-03-03 16:14:14,839 | INFO     | chi2: 1.5757193717051796
[2026-03-03 17:15:15] 2026-03-03 16:14:14,839 | INFO     | current chi2=1.5757193717051796 (change=33.64845794745373 %)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,839 | INFO     | sum of square deviations: 3168449315.9815555
[2026-03-03 17:15:15] 2026-03-03 16:14:14,840 | INFO     | sum of deviations: -43724099178.82489
[2026-03-03 17:15:15] 2026-03-03 16:14:14,840 | INFO     | mean x: 1772547240.0092165
[2026-03-03 17:15:15] 2026-03-03 16:14:14,841 | INFO     | mean y: 2406209.9124423964
[2026-03-03 17:15:15] 2026-03-03 16:14:14,841 | INFO     | intersect: 24463277630.639465
[2026-03-03 17:15:15] 2026-03-03 16:14:14,841 | INFO     | chi2: 1.5707222036058048
[2026-03-03 17:15:15] 2026-03-03 16:14:14,841 | INFO     | current chi2=1.5707222036058048 (change=0.3171356644531856 %)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,841 | INFO     | right removable region: 216
[2026-03-03 17:15:15] 2026-03-03 16:14:14,841 | INFO     | sum of square deviations: 3392554013.481972
[2026-03-03 17:15:15] 2026-03-03 16:14:14,843 | INFO     | sum of deviations: -85803183397.87836
[2026-03-03 17:15:15] 2026-03-03 16:14:14,843 | INFO     | mean x: 1772547697.5090091
[2026-03-03 17:15:15] 2026-03-03 16:14:14,843 | INFO     | mean y: 2411067.689189189
[2026-03-03 17:15:15] 2026-03-03 16:14:14,843 | INFO     | intersect: 44833012015.07207
[2026-03-03 17:15:15] 2026-03-03 16:14:14,843 | INFO     | chi2: 1.1347040841113278
[2026-03-03 17:15:15] 2026-03-03 16:14:14,844 | INFO     | current chi2=1.1347040841113278 (change=52.219051751179734 %)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,844 | INFO     | sum of square deviations: 3168446875.9815555
[2026-03-03 17:15:15] 2026-03-03 16:14:14,845 | INFO     | sum of deviations: -78199558365.98163
[2026-03-03 17:15:15] 2026-03-03 16:14:14,845 | INFO     | mean x: 1772547850.0092165
[2026-03-03 17:15:15] 2026-03-03 16:14:14,845 | INFO     | mean y: 2405876.99078341
[2026-03-03 17:15:15] 2026-03-03 16:14:14,845 | INFO     | intersect: 43750167628.669235
[2026-03-03 17:15:15] 2026-03-03 16:14:14,846 | INFO     | chi2: 1.1267683733737899
[2026-03-03 17:15:15] 2026-03-03 16:14:14,846 | INFO     | current chi2=1.1267683733737899 (change=0.6993639001267025 %)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,846 | INFO     | left removable region: 20
[2026-03-03 17:15:15] 2026-03-03 16:14:14,846 | INFO     | sum of square deviations: 2334708574.979599
[2026-03-03 17:15:15] 2026-03-03 16:14:14,847 | INFO     | sum of deviations: -43290285973.89796
[2026-03-03 17:15:15] 2026-03-03 16:14:14,847 | INFO     | mean x: 1772547819.510204
[2026-03-03 17:15:15] 2026-03-03 16:14:14,848 | INFO     | mean y: 2404124.198979592
[2026-03-03 17:15:15] 2026-03-03 16:14:14,848 | INFO     | intersect: 32869076578.030396
[2026-03-03 17:15:15] 2026-03-03 16:14:14,848 | INFO     | chi2: 0.2600301158238289
[2026-03-03 17:15:15] 2026-03-03 16:14:14,848 | INFO     | current memory leak: -18.54 B/s (using 196 data points, chi2=0.26)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | could have reported an average CPU frequency of 2600 MHz (11 samples)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | ..............................
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . Timing measurements:
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . get job = 0 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . initial setup = 7 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . payload setup = 7 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . stage-in = 0 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . payload execution = 13803 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . stage-out = 1 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | . log creation = 0 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,849 | INFO     | ..............................
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | 
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | job summary report
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | --------------------------------------------------
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | PanDA job id: 7036136299
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | task id: 48838581
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | errors: (none)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | pilot state: finished 
[2026-03-03 17:15:15] 2026-03-03 16:14:14,940 | INFO     | transexitcode: 0
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | exeerrorcode: 0
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | exeerrordiag: 
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | exitcode: 0
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | exitmsg: OK
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | cpuconsumptiontime: 52322 s
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | nevents: 400
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | neventsw: 0
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | pid: 1427634
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | pgrp: 1427634
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | corecount: 4
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | event service: False
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | sizes: {0: 2286677, 1: 2287138, 12: 2287138, 13813: 2317420, 13814: 2317419, 13815: 2326495, 13817: 2326873}
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | --------------------------------------------------
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | 
[2026-03-03 17:15:15] 2026-03-03 16:14:14,941 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-03-03 17:15:15] 2026-03-03 16:14:14,958 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,958 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | job 7036136299 has completed (purged errors)
[2026-03-03 17:15:15] 2026-03-03 16:14:14,960 | INFO     | overall cleanup function is called
[2026-03-03 17:15:15] 2026-03-03 16:14:15,968 | INFO     | --- collectZombieJob: --- 10, [1427634]
[2026-03-03 17:15:15] 2026-03-03 16:14:15,968 | INFO     | zombie collector waiting for pid 1427634
[2026-03-03 17:15:15] 2026-03-03 16:14:15,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 17:15:15] 2026-03-03 16:14:15,969 | INFO     | collected zombie processes
[2026-03-03 17:15:15] 2026-03-03 16:14:15,969 | INFO     | will attempt to kill all subprocesses of pid=1427634
[2026-03-03 17:15:15] 2026-03-03 16:14:16,303 | INFO     | process IDs to be killed: [1427634] (in reverse order)
[2026-03-03 17:15:15] 2026-03-03 16:14:16,405 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 17:15:15] 2026-03-03 16:14:16,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 17:15:15] 2026-03-03 16:14:16,418 | INFO     | did not find any defunct processes belonging to 1427634
[2026-03-03 17:15:15] 2026-03-03 16:14:16,431 | INFO     | did not find any defunct processes belonging to 1427634
[2026-03-03 17:15:15] 2026-03-03 16:14:16,431 | INFO     | ready for new job
[2026-03-03 17:15:15] 2026-03-03 16:14:16,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 17:15:15] 2026-03-03 16:14:16,433 | INFO     | **************************************
[2026-03-03 17:15:15] 2026-03-03 16:14:16,433 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 17:15:15] 2026-03-03 16:14:16,433 | INFO     | **************************************
[2026-03-03 17:15:15] 2026-03-03 16:14:16,434 | INFO     | 
[2026-03-03 17:15:15] 2026-03-03 16:14:16,437 | INFO     | architecture information:
[2026-03-03 17:15:15] 2026-03-03 16:14:16,438 | INFO     | executing command: cat /etc/os-release
[2026-03-03 17:15:15] 2026-03-03 16:14:16,449 | INFO     | cat /etc/os-release:
[2026-03-03 17:15:15] NAME="CentOS Linux"
[2026-03-03 17:15:15] VERSION="7 (Core)"
[2026-03-03 17:15:15] ID="centos"
[2026-03-03 17:15:15] ID_LIKE="rhel fedora"
[2026-03-03 17:15:15] VERSION_ID="7"
[2026-03-03 17:15:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 17:15:15] ANSI_COLOR="0;31"
[2026-03-03 17:15:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 17:15:15] HOME_URL="https://www.centos.org/"
[2026-03-03 17:15:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 17:15:15] 
[2026-03-03 17:15:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 17:15:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 17:15:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 17:15:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 17:15:15] 
[2026-03-03 17:15:15] 2026-03-03 16:14:16,450 | INFO     | **************************************
[2026-03-03 17:15:15] 2026-03-03 16:14:16,953 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-03 17:15:15] 2026-03-03 16:14:16,968 | INFO     | sufficient remaining disk space (670866341888 B)
[2026-03-03 17:15:15] 2026-03-03 16:14:16,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 17:15:15] 2026-03-03 16:14:16,968 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 17:15:15] 2026-03-03 16:14:16,968 | INFO     | update_server=False
[2026-03-03 17:15:15] 2026-03-03 16:14:16,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 17:15:15] 2026-03-03 16:14:16,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 17:15:15] 2026-03-03 16:14:16,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 17:15:15] 2026-03-03 16:14:17,318 | INFO     | all job control threads have been joined
[2026-03-03 17:15:15] 2026-03-03 16:14:17,518 | INFO     | all data control threads have been joined
[2026-03-03 17:15:15] 2026-03-03 16:14:17,728 | INFO     | all payload control threads have been joined
[2026-03-03 17:15:15] 2026-03-03 16:14:17,971 | INFO     | [job] retrieve thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,138 | INFO     | [payload] validate_post thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,210 | WARNING  | process 1427634 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 17:15:15] 2026-03-03 16:14:18,218 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,323 | INFO     | [job] control thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,469 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 17:15:15] 2026-03-03 16:14:18,470 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7036136299/payload.stdout) since it has not been created yet
[2026-03-03 17:15:15] 2026-03-03 16:14:18,470 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-03 17:15:15] 2026-03-03 16:14:18,486 | INFO     | sufficient remaining disk space (670865293312 B)
[2026-03-03 17:15:15] 2026-03-03 16:14:18,487 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 17:15:15] 2026-03-03 16:14:18,487 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7036136299/HITS.48838581._004760.pool.root.1 since it does not exist
[2026-03-03 17:15:15] 2026-03-03 16:14:18,523 | INFO     | [data] control thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,546 | INFO     | [data] copytool_in thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,699 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,733 | INFO     | [payload] control thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:18,838 | INFO     | number of running child processes to parent process 1427634: 1
[2026-03-03 17:15:15] 2026-03-03 16:14:18,838 | INFO     | maximum number of monitored processes: 6
[2026-03-03 17:15:15] 2026-03-03 16:14:18,838 | INFO     | aborting job monitoring since job object (job id=7036136299) has expired
[2026-03-03 17:15:15] 2026-03-03 16:14:18,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:15:15] 2026-03-03 16:14:18,839 | INFO     | will abort loop
[2026-03-03 17:15:15] 2026-03-03 16:14:18,975 | INFO     | [data] copytool_out thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:19,058 | INFO     | [job] validate thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:19,240 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:19,453 | INFO     | [payload] failed_post thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:19,844 | INFO     | [job] job monitor thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:19,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:15:15] 2026-03-03 16:14:20,951 | INFO     | [job] queue monitor thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:20,972 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:27,228 | INFO     | job.realtimelogging is not enabled
[2026-03-03 17:15:15] 2026-03-03 16:14:28,233 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 17:15:15] 2026-03-03 16:14:47,015 | INFO     | PID=1422863 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 17:15:15] 2026-03-03 16:14:47,015 | INFO     | .. there are 12 such processes running
[2026-03-03 17:15:15] 2026-03-03 16:14:47,016 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 17:15:15] 2026-03-03 16:14:47,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 17:15:15] 2026-03-03 16:14:47,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 17:15:15] 2026-03-03 16:15:09,011 | INFO     | [monitor] cgroup control has ended
[2026-03-03 17:15:15] 2026-03-03 16:15:10,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23201181050688)>', '<ExcThread(monitor, started 23200859649792)>']
[2026-03-03 17:15:15] 2026-03-03 16:15:11,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 17:15:15] 2026-03-03 16:15:11,106 | INFO     | [monitor] control thread has ended
[2026-03-03 17:15:15] 2026-03-03 16:15:15,407 | INFO     | all workflow threads have been joined
[2026-03-03 17:15:15] 2026-03-03 16:15:15,408 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 17:15:15] 2026-03-03 16:15:15,408 | INFO     | traces error code: 0
[2026-03-03 17:15:15] 2026-03-03 16:15:15,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 17:15:15] 2026-03-03 16:15:15,546 [wrapper] ==== pilot stdout END ====
[2026-03-03 17:15:15] 2026-03-03 16:15:15,550 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 17:15:15] 2026-03-03 16:15:15,552 [wrapper] pilotpid: 1422863
[2026-03-03 17:15:15] 2026-03-03 16:15:15,555 [wrapper] Pilot exit status: 0
[2026-03-03 17:15:15] 2026-03-03 16:15:15,564 [wrapper] pandaids: 7036136299
[2026-03-03 17:15:15] 2026-03-03 16:15:15,638 [wrapper] cleanup supervisor_pilot 1586669 1422864
[2026-03-03 17:15:15] 2026-03-03 16:15:15,641 [wrapper] Test setup, not cleaning
[2026-03-03 17:15:15] 2026-03-03 16:15:15,644 [wrapper] apfmon messages muted
[2026-03-03 17:15:15] 2026-03-03 16:15:15,647 [wrapper] ==== wrapper stdout END ====
[2026-03-03 17:15:15] 2026-03-03 16:15:15,649 [wrapper] ==== wrapper stderr END ====
[2026-03-03 17:15:15]  *** Error codes and diagnostics ***
[2026-03-03 17:15:15]     "exeErrorCode": 0,
[2026-03-03 17:15:15]     "exeErrorDiag": "",
[2026-03-03 17:15:15]     "pilotErrorCode": 0,
[2026-03-03 17:15:15]     "pilotErrorDiag": "",
[2026-03-03 17:15:15]  *** Listing of results directory ***
[2026-03-03 17:15:15] total 514696
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc    584627 Mar  3 00:56 pilot3.tar.gz
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc      5111 Mar  3 00:57 queuedata.json
[2026-03-03 17:15:15] -rwx------ 1 boinc boinc     36322 Mar  3 00:58 runpilot2-wrapper.sh
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc       100 Mar  3 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 17:15:15] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 13:23 run_atlas
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc       105 Mar  3 13:23 job.xml
[2026-03-03 17:15:15] -rw-r--r-- 2 boinc boinc 288657706 Mar  3 13:23 EVNT.48220205._000200.pool.root.1
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc      6638 Mar  3 13:23 init_data.xml
[2026-03-03 17:15:15] -rw-r--r-- 2 boinc boinc     15845 Mar  3 13:23 start_atlas.sh
[2026-03-03 17:15:15] drwxrwx--x 2 boinc boinc      4096 Mar  3 13:23 shared
[2026-03-03 17:15:15] -rw-r--r-- 2 boinc boinc    597954 Mar  3 13:23 input.tar.gz
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc         0 Mar  3 13:23 boinc_lockfile
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc      2588 Mar  3 13:23 pandaJob.out
[2026-03-03 17:15:15] -rw------- 1 boinc boinc    998442 Mar  3 13:23 agis_schedconf.cvmfs.json
[2026-03-03 17:15:15] -rw------- 1 boinc boinc       451 Mar  3 13:23 workernode_map.json
[2026-03-03 17:15:15] drwx------ 5 boinc boinc      4096 Mar  3 13:23 pilot3
[2026-03-03 17:15:15] -rw------- 1 boinc boinc 229795962 Mar  3 17:13 HITS.48838581._004760.pool.root.1
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc       529 Mar  3 17:13 boinc_task_state.xml
[2026-03-03 17:15:15] -rw------- 1 boinc boinc      1031 Mar  3 17:14 memory_monitor_summary.json
[2026-03-03 17:15:15] -rw------- 1 boinc boinc   1516092 Mar  3 17:14 agis_ddmendpoints.agis.ALL.json
[2026-03-03 17:15:15] -rw------- 1 boinc boinc    386978 Mar  3 17:14 log.48838581._004760.job.log.tgz.1
[2026-03-03 17:15:15] -rw------- 1 boinc boinc      6403 Mar  3 17:14 heartbeat.json
[2026-03-03 17:15:15] -rw------- 1 boinc boinc        95 Mar  3 17:14 pilot_heartbeat.json
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc      8192 Mar  3 17:15 boinc_mmap_file
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc        28 Mar  3 17:15 wrapper_checkpoint.txt
[2026-03-03 17:15:15] -rw------- 1 boinc boinc      6109 Mar  3 17:15 pilotlog.txt
[2026-03-03 17:15:15] -rw------- 1 boinc boinc   1941547 Mar  3 17:15 log.48838581._004760.job.log.1
[2026-03-03 17:15:15] -rw------- 1 boinc boinc       357 Mar  3 17:15 output.list
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc       620 Mar  3 17:15 runtime_log
[2026-03-03 17:15:15] -rw------- 1 boinc boinc   2344960 Mar  3 17:15 result.tar.gz
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc      9205 Mar  3 17:15 runtime_log.err
[2026-03-03 17:15:15] -rw------- 1 boinc boinc       665 Mar  3 17:15 boVLDmZKSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm33CLDmejXf5n.diag
[2026-03-03 17:15:15] -rw-r--r-- 1 boinc boinc     21236 Mar  3 17:15 stderr.txt
[2026-03-03 17:15:15] HITS file was successfully produced:
[2026-03-03 17:15:15] -rw------- 1 boinc boinc 229795962 Mar  3 17:13 shared/HITS.pool.root.1
[2026-03-03 17:15:15]  *** Contents of shared directory: ***
[2026-03-03 17:15:15] total 509208
[2026-03-03 17:15:15] -rw-r--r-- 2 boinc boinc 288657706 Mar  3 13:23 ATLAS.root_0
[2026-03-03 17:15:15] -rw-r--r-- 2 boinc boinc     15845 Mar  3 13:23 start_atlas.sh
[2026-03-03 17:15:15] -rw-r--r-- 2 boinc boinc    597954 Mar  3 13:23 input.tar.gz
[2026-03-03 17:15:15] -rw------- 1 boinc boinc 229795962 Mar  3 17:13 HITS.pool.root.1
[2026-03-03 17:15:15] -rw------- 1 boinc boinc   2344960 Mar  3 17:15 result.tar.gz
17:15:16 (1418792): run_atlas exited; CPU time 52870.941854
17:15:16 (1418792): called boinc_finish(0)

</stderr_txt>
]]>

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