Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:14:44 (1615216): wrapper (7.7.26015): starting
00:14:44 (1615216): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 00:14:44] Arguments: --nthreads 4
[2026-03-04 00:14:44] Threads: 4
[2026-03-04 00:14:44] Checking for CVMFS
[2026-03-04 00:14:44] No cvmfs_config command found, will try listing directly
[2026-03-04 00:14:44] CVMFS is ok
[2026-03-04 00:14:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 00:14:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 00:14:44] Further information can be found at the LHC@home message board.
[2026-03-04 00:14:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 00:14:44] Checking for apptainer binary...
[2026-03-04 00:14:44] which: no apptainer in ((null))
[2026-03-04 00:14:44] apptainer is not installed, using version from CVMFS
[2026-03-04 00:14:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 00:14:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-04 00:14:45] apptainer works
[2026-03-04 00:14:45] Set ATHENA_PROC_NUMBER=4
[2026-03-04 00:14:45] Set ATHENA_CORE_NUMBER=4
[2026-03-04 00:14:45] Starting ATLAS job with PandaID=7036184081
[2026-03-04 00:14:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 03:38:27]  *** The last 200 lines of the pilot log: ***
[2026-03-04 03:38:27] 2026-03-04 02:37:42,749 | INFO     | time since job start (12161s) is within the limit (349056.0s)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,245 | INFO     | job 7036184081 has state=finished
[2026-03-04 03:38:27] 2026-03-04 02:37:43,245 | INFO     | preparing for final server update for job 7036184081 in state='finished'
[2026-03-04 03:38:27] 2026-03-04 02:37:43,245 | INFO     | reading metadata from: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7036184081/jobReport.json
[2026-03-04 03:38:27] 2026-03-04 02:37:43,248 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot28/slots/0/workernode_map.json
[2026-03-04 03:38:27] 2026-03-04 02:37:43,248 | INFO     | this job has now completed (state=finished)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,248 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,248 | INFO     | log transfer has been attempted: DONE
[2026-03-04 03:38:27] 2026-03-04 02:37:43,249 | INFO     | job 7036184081 has finished - writing final server update
[2026-03-04 03:38:27] 2026-03-04 02:37:43,249 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1720862/.job.ad'
[2026-03-04 03:38:27] 2026-03-04 02:37:43,249 | INFO     | total number of processed events: 400 (read)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,261 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7036184081/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,262 | INFO     | extracted standard info from prmon json
[2026-03-04 03:38:27] 2026-03-04 02:37:43,262 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 03:38:27] 2026-03-04 02:37:43,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 03:38:27] 2026-03-04 02:37:43,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 03:38:27] 2026-03-04 02:37:43,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 03:38:27] 2026-03-04 02:37:43,266 | INFO     | fitting pss+swap vs Time
[2026-03-04 03:38:27] 2026-03-04 02:37:43,266 | INFO     | sum of square deviations: 2443580700.0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,268 | INFO     | sum of deviations: 8055502497.999991
[2026-03-04 03:38:27] 2026-03-04 02:37:43,268 | INFO     | mean x: 1772585763.0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,268 | INFO     | mean y: 2350337.7989949747
[2026-03-04 03:38:27] 2026-03-04 02:37:43,268 | INFO     | intersect: -5841151798.94882
[2026-03-04 03:38:27] 2026-03-04 02:37:43,268 | INFO     | chi2: 1.227781089152623
[2026-03-04 03:38:27] 2026-03-04 02:37:43,269 | INFO     | sum of square deviations: 2263977332.5
[2026-03-04 03:38:27] 2026-03-04 02:37:43,270 | INFO     | sum of deviations: 7928563083.999999
[2026-03-04 03:38:27] 2026-03-04 02:37:43,270 | INFO     | mean x: 1772585610.5
[2026-03-04 03:38:27] 2026-03-04 02:37:43,270 | INFO     | mean y: 2350230.567010309
[2026-03-04 03:38:27] 2026-03-04 02:37:43,270 | INFO     | intersect: -6205334198.464216
[2026-03-04 03:38:27] 2026-03-04 02:37:43,270 | INFO     | chi2: 1.2283703895192837
[2026-03-04 03:38:27] 2026-03-04 02:37:43,271 | INFO     | current chi2=1.2283703895192837 (change=-0.04799718548094943 %)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,271 | INFO     | right removable region: 193
[2026-03-04 03:38:27] 2026-03-04 02:37:43,271 | INFO     | sum of square deviations: 2263977332.5
[2026-03-04 03:38:27] 2026-03-04 02:37:43,272 | INFO     | sum of deviations: -15182873892.0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,272 | INFO     | mean x: 1772585915.5
[2026-03-04 03:38:27] 2026-03-04 02:37:43,272 | INFO     | mean y: 2369812.144329897
[2026-03-04 03:38:27] 2026-03-04 02:37:43,273 | INFO     | intersect: 11889833538.670782
[2026-03-04 03:38:27] 2026-03-04 02:37:43,273 | INFO     | chi2: 0.0176706281887009
[2026-03-04 03:38:27] 2026-03-04 02:37:43,273 | INFO     | current chi2=0.0176706281887009 (change=98.56076719662651 %)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,273 | INFO     | sum of square deviations: 2093397390.0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,274 | INFO     | sum of deviations: -12892638163.999979
[2026-03-04 03:38:27] 2026-03-04 02:37:43,275 | INFO     | mean x: 1772586068.0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,275 | INFO     | mean y: 2367760.253968254
[2026-03-04 03:38:27] 2026-03-04 02:37:43,275 | INFO     | intersect: 10919220383.859974
[2026-03-04 03:38:27] 2026-03-04 02:37:43,275 | INFO     | chi2: 0.01611047936091825
[2026-03-04 03:38:27] 2026-03-04 02:37:43,275 | INFO     | current chi2=0.01611047936091825 (change=8.829051299830146 %)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,275 | INFO     | left removable region: 20
[2026-03-04 03:38:27] 2026-03-04 02:37:43,276 | INFO     | sum of square deviations: 1605470102.0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,277 | INFO     | sum of deviations: -7056850208.999999
[2026-03-04 03:38:27] 2026-03-04 02:37:43,277 | INFO     | mean x: 1772586190.0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,277 | INFO     | mean y: 2362631.1849710983
[2026-03-04 03:38:27] 2026-03-04 02:37:43,277 | INFO     | intersect: 7793772268.642058
[2026-03-04 03:38:27] 2026-03-04 02:37:43,277 | INFO     | chi2: 0.007196453781559547
[2026-03-04 03:38:27] 2026-03-04 02:37:43,277 | INFO     | current memory leak: -4.40 B/s (using 173 data points, chi2=0.01)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | could have reported an average CPU frequency of 2632 MHz (10 samples)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | ..............................
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . Timing measurements:
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . get job = 0 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . initial setup = 5 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . payload setup = 6 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . stage-in = 0 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . payload execution = 12135 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . stage-out = 1 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,278 | INFO     | . log creation = 0 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,279 | INFO     | ..............................
[2026-03-04 03:38:27] 2026-03-04 02:37:43,370 | INFO     | 
[2026-03-04 03:38:27] 2026-03-04 02:37:43,370 | INFO     | job summary report
[2026-03-04 03:38:27] 2026-03-04 02:37:43,370 | INFO     | --------------------------------------------------
[2026-03-04 03:38:27] 2026-03-04 02:37:43,370 | INFO     | PanDA job id: 7036184081
[2026-03-04 03:38:27] 2026-03-04 02:37:43,370 | INFO     | task id: 48838586
[2026-03-04 03:38:27] 2026-03-04 02:37:43,370 | INFO     | errors: (none)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | pilot state: finished 
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | transexitcode: 0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | exeerrorcode: 0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | exeerrordiag: 
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | exitcode: 0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | exitmsg: OK
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | cpuconsumptiontime: 47061 s
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | nevents: 400
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | neventsw: 0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | pid: 1624302
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | pgrp: 1624302
[2026-03-04 03:38:27] 2026-03-04 02:37:43,371 | INFO     | corecount: 4
[2026-03-04 03:38:27] 2026-03-04 02:37:43,372 | INFO     | event service: False
[2026-03-04 03:38:27] 2026-03-04 02:37:43,372 | INFO     | sizes: {0: 2286770, 1: 2287032, 11: 2287060, 12145: 2316702, 12147: 2325722, 12148: 2325778, 12150: 2326100}
[2026-03-04 03:38:27] 2026-03-04 02:37:43,372 | INFO     | --------------------------------------------------
[2026-03-04 03:38:27] 2026-03-04 02:37:43,372 | INFO     | 
[2026-03-04 03:38:27] 2026-03-04 02:37:43,372 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-03-04 03:38:27] 2026-03-04 02:37:43,394 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,394 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,394 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,394 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 03:38:27] 2026-03-04 02:37:43,396 | INFO     | job 7036184081 has completed (purged errors)
[2026-03-04 03:38:27] 2026-03-04 02:37:43,396 | INFO     | overall cleanup function is called
[2026-03-04 03:38:27] 2026-03-04 02:37:44,404 | INFO     | --- collectZombieJob: --- 10, [1624302]
[2026-03-04 03:38:27] 2026-03-04 02:37:44,404 | INFO     | zombie collector waiting for pid 1624302
[2026-03-04 03:38:27] 2026-03-04 02:37:44,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 03:38:27] 2026-03-04 02:37:44,404 | INFO     | collected zombie processes
[2026-03-04 03:38:27] 2026-03-04 02:37:44,404 | INFO     | will attempt to kill all subprocesses of pid=1624302
[2026-03-04 03:38:27] 2026-03-04 02:37:44,726 | INFO     | process IDs to be killed: [1624302] (in reverse order)
[2026-03-04 03:38:27] 2026-03-04 02:37:44,837 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 03:38:27] 2026-03-04 02:37:44,838 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 03:38:27] 2026-03-04 02:37:44,847 | INFO     | did not find any defunct processes belonging to 1624302
[2026-03-04 03:38:27] 2026-03-04 02:37:44,855 | INFO     | did not find any defunct processes belonging to 1624302
[2026-03-04 03:38:27] 2026-03-04 02:37:44,856 | INFO     | ready for new job
[2026-03-04 03:38:27] 2026-03-04 02:37:44,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 03:38:27] 2026-03-04 02:37:44,858 | INFO     | **************************************
[2026-03-04 03:38:27] 2026-03-04 02:37:44,858 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 03:38:27] 2026-03-04 02:37:44,858 | INFO     | **************************************
[2026-03-04 03:38:27] 2026-03-04 02:37:44,858 | INFO     | 
[2026-03-04 03:38:27] 2026-03-04 02:37:44,862 | INFO     | architecture information:
[2026-03-04 03:38:27] 2026-03-04 02:37:44,863 | INFO     | executing command: cat /etc/os-release
[2026-03-04 03:38:27] 2026-03-04 02:37:44,879 | INFO     | cat /etc/os-release:
[2026-03-04 03:38:27] NAME="CentOS Linux"
[2026-03-04 03:38:27] VERSION="7 (Core)"
[2026-03-04 03:38:27] ID="centos"
[2026-03-04 03:38:27] ID_LIKE="rhel fedora"
[2026-03-04 03:38:27] VERSION_ID="7"
[2026-03-04 03:38:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 03:38:27] ANSI_COLOR="0;31"
[2026-03-04 03:38:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 03:38:27] HOME_URL="https://www.centos.org/"
[2026-03-04 03:38:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 03:38:27] 
[2026-03-04 03:38:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 03:38:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 03:38:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 03:38:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 03:38:27] 
[2026-03-04 03:38:27] 2026-03-04 02:37:44,879 | INFO     | **************************************
[2026-03-04 03:38:27] 2026-03-04 02:37:45,382 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-03-04 03:38:27] 2026-03-04 02:37:45,397 | INFO     | sufficient remaining disk space (668593029120 B)
[2026-03-04 03:38:27] 2026-03-04 02:37:45,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 03:38:27] 2026-03-04 02:37:45,398 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 03:38:27] 2026-03-04 02:37:45,398 | INFO     | update_server=False
[2026-03-04 03:38:27] 2026-03-04 02:37:45,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 03:38:27] 2026-03-04 02:37:45,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 03:38:27] 2026-03-04 02:37:45,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 03:38:27] 2026-03-04 02:37:45,399 | INFO     | aborting loop
[2026-03-04 03:38:27] 2026-03-04 02:37:45,874 | INFO     | all payload control threads have been joined
[2026-03-04 03:38:27] 2026-03-04 02:37:46,247 | INFO     | all data control threads have been joined
[2026-03-04 03:38:27] 2026-03-04 02:37:46,404 | INFO     | [job] retrieve thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:46,404 | INFO     | [job] job monitor thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:46,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:46,584 | INFO     | all job control threads have been joined
[2026-03-04 03:38:27] 2026-03-04 02:37:46,831 | INFO     | [job] validate thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:46,838 | INFO     | [payload] failed_post thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:46,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 03:38:27] 2026-03-04 02:37:46,876 | INFO     | [payload] control thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:46,996 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:47,041 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:47,252 | INFO     | [data] control thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:47,400 | INFO     | [data] copytool_out thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:47,480 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:47,590 | INFO     | [job] control thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:47,667 | INFO     | [payload] validate_post thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:47,691 | INFO     | [data] copytool_in thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:48,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 03:38:27] 2026-03-04 02:37:49,378 | INFO     | [job] queue monitor thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:37:50,879 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 03:38:27] 2026-03-04 02:38:16,186 | INFO     | PID=1619289 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 03:38:27] 2026-03-04 02:38:16,186 | INFO     | .. there are 12 such processes running
[2026-03-04 03:38:27] 2026-03-04 02:38:16,187 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 03:38:27] 2026-03-04 02:38:16,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 03:38:27] 2026-03-04 02:38:16,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 03:38:27] 2026-03-04 02:38:21,335 | INFO     | [monitor] cgroup control has ended
[2026-03-04 03:38:27] 2026-03-04 02:38:22,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22750506780480)>', '<ExcThread(monitor, started 22750266926848)>']
[2026-03-04 03:38:27] 2026-03-04 02:38:23,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 03:38:27] 2026-03-04 02:38:23,222 | INFO     | [monitor] control thread has ended
[2026-03-04 03:38:27] 2026-03-04 02:38:27,376 | INFO     | all workflow threads have been joined
[2026-03-04 03:38:27] 2026-03-04 02:38:27,376 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 03:38:27] 2026-03-04 02:38:27,377 | INFO     | traces error code: 0
[2026-03-04 03:38:27] 2026-03-04 02:38:27,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 03:38:27] 2026-03-04 02:38:27,519 [wrapper] ==== pilot stdout END ====
[2026-03-04 03:38:27] 2026-03-04 02:38:27,522 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 03:38:27] 2026-03-04 02:38:27,524 [wrapper] pilotpid: 1619289
[2026-03-04 03:38:27] 2026-03-04 02:38:27,527 [wrapper] Pilot exit status: 0
[2026-03-04 03:38:27] 2026-03-04 02:38:27,536 [wrapper] pandaids: 7036184081
[2026-03-04 03:38:27] 2026-03-04 02:38:27,598 [wrapper] cleanup supervisor_pilot 1811233 1619290
[2026-03-04 03:38:27] 2026-03-04 02:38:27,600 [wrapper] Test setup, not cleaning
[2026-03-04 03:38:27] 2026-03-04 02:38:27,603 [wrapper] apfmon messages muted
[2026-03-04 03:38:27] 2026-03-04 02:38:27,605 [wrapper] ==== wrapper stdout END ====
[2026-03-04 03:38:27] 2026-03-04 02:38:27,607 [wrapper] ==== wrapper stderr END ====
[2026-03-04 03:38:27]  *** Error codes and diagnostics ***
[2026-03-04 03:38:27]     "exeErrorCode": 0,
[2026-03-04 03:38:27]     "exeErrorDiag": "",
[2026-03-04 03:38:27]     "pilotErrorCode": 0,
[2026-03-04 03:38:27]     "pilotErrorDiag": "",
[2026-03-04 03:38:27]  *** Listing of results directory ***
[2026-03-04 03:38:27] total 487084
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc    584627 Mar  3 04:05 pilot3.tar.gz
[2026-03-04 03:38:27] -rwx------ 1 boinc boinc     36322 Mar  3 04:08 runpilot2-wrapper.sh
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc      5111 Mar  3 04:10 queuedata.json
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc       100 Mar  4 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 03:38:27] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 00:14 run_atlas
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc       105 Mar  4 00:14 job.xml
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc      6639 Mar  4 00:14 init_data.xml
[2026-03-04 03:38:27] -rw-r--r-- 2 boinc boinc 277376796 Mar  4 00:14 EVNT.48220221._000089.pool.root.1
[2026-03-04 03:38:27] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:14 start_atlas.sh
[2026-03-04 03:38:27] drwxrwx--x 2 boinc boinc      4096 Mar  4 00:14 shared
[2026-03-04 03:38:27] -rw-r--r-- 2 boinc boinc    597962 Mar  4 00:14 input.tar.gz
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc         0 Mar  4 00:14 boinc_lockfile
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc      2561 Mar  4 00:14 pandaJob.out
[2026-03-04 03:38:27] -rw------- 1 boinc boinc    998484 Mar  4 00:14 agis_schedconf.cvmfs.json
[2026-03-04 03:38:27] -rw------- 1 boinc boinc       447 Mar  4 00:15 workernode_map.json
[2026-03-04 03:38:27] drwx------ 5 boinc boinc      4096 Mar  4 00:15 pilot3
[2026-03-04 03:38:27] -rw------- 1 boinc boinc 213241484 Mar  4 03:36 HITS.48838586._002287.pool.root.1
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc       530 Mar  4 03:37 boinc_task_state.xml
[2026-03-04 03:38:27] -rw------- 1 boinc boinc      1033 Mar  4 03:37 memory_monitor_summary.json
[2026-03-04 03:38:27] -rw------- 1 boinc boinc   1516092 Mar  4 03:37 agis_ddmendpoints.agis.ALL.json
[2026-03-04 03:38:27] -rw------- 1 boinc boinc    383403 Mar  4 03:37 log.48838586._002287.job.log.tgz.1
[2026-03-04 03:38:27] -rw------- 1 boinc boinc      6398 Mar  4 03:37 heartbeat.json
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc      8192 Mar  4 03:37 boinc_mmap_file
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc        28 Mar  4 03:38 wrapper_checkpoint.txt
[2026-03-04 03:38:27] -rw------- 1 boinc boinc        95 Mar  4 03:38 pilot_heartbeat.json
[2026-03-04 03:38:27] -rw------- 1 boinc boinc      4830 Mar  4 03:38 pilotlog.txt
[2026-03-04 03:38:27] -rw------- 1 boinc boinc   1732455 Mar  4 03:38 log.48838586._002287.job.log.1
[2026-03-04 03:38:27] -rw------- 1 boinc boinc       357 Mar  4 03:38 output.list
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc       620 Mar  4 03:38 runtime_log
[2026-03-04 03:38:27] -rw------- 1 boinc boinc   2129920 Mar  4 03:38 result.tar.gz
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc      9205 Mar  4 03:38 runtime_log.err
[2026-03-04 03:38:27] -rw------- 1 boinc boinc       665 Mar  4 03:38 fgtNDmsIVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFUFLDmEnngfm.diag
[2026-03-04 03:38:27] -rw-r--r-- 1 boinc boinc     21139 Mar  4 03:38 stderr.txt
[2026-03-04 03:38:27] HITS file was successfully produced:
[2026-03-04 03:38:27] -rw------- 1 boinc boinc 213241484 Mar  4 03:36 shared/HITS.pool.root.1
[2026-03-04 03:38:27]  *** Contents of shared directory: ***
[2026-03-04 03:38:27] total 481808
[2026-03-04 03:38:27] -rw-r--r-- 2 boinc boinc 277376796 Mar  4 00:14 ATLAS.root_0
[2026-03-04 03:38:27] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:14 start_atlas.sh
[2026-03-04 03:38:27] -rw-r--r-- 2 boinc boinc    597962 Mar  4 00:14 input.tar.gz
[2026-03-04 03:38:27] -rw------- 1 boinc boinc 213241484 Mar  4 03:36 HITS.pool.root.1
[2026-03-04 03:38:27] -rw------- 1 boinc boinc   2129920 Mar  4 03:38 result.tar.gz
03:38:29 (1615216): run_atlas exited; CPU time 47506.922901
03:38:29 (1615216): called boinc_finish(0)

</stderr_txt>
]]>

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