Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:41:05 (3895483): wrapper (7.7.26015): starting
13:41:05 (3895483): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 13:41:05] Arguments: --nthreads 4
[2026-03-03 13:41:05] Threads: 4
[2026-03-03 13:41:05] Checking for CVMFS
[2026-03-03 13:41:05] No cvmfs_config command found, will try listing directly
[2026-03-03 13:41:05] CVMFS is ok
[2026-03-03 13:41:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 13:41:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 13:41:05] Further information can be found at the LHC@home message board.
[2026-03-03 13:41:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 13:41:05] Checking for apptainer binary...
[2026-03-03 13:41:05] which: no apptainer in ((null))
[2026-03-03 13:41:05] apptainer is not installed, using version from CVMFS
[2026-03-03 13:41:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 13:41:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-03 13:41:05] apptainer works
[2026-03-03 13:41:05] Set ATHENA_PROC_NUMBER=4
[2026-03-03 13:41:05] Set ATHENA_CORE_NUMBER=4
[2026-03-03 13:41:05] Starting ATLAS job with PandaID=7036184109
[2026-03-03 13:41:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 17:37:48]  *** The last 200 lines of the pilot log: ***
[2026-03-03 17:37:48] 2026-03-03 16:05:10,888 | INFO     | job 7036184109 has state=finished
[2026-03-03 17:37:48] 2026-03-03 16:05:10,889 | INFO     | preparing for final server update for job 7036184109 in state='finished'
[2026-03-03 17:37:48] 2026-03-03 16:05:10,889 | INFO     | reading metadata from: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7036184109/jobReport.json
[2026-03-03 17:37:48] 2026-03-03 16:05:10,892 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot68/slots/0/workernode_map.json
[2026-03-03 17:37:48] 2026-03-03 16:05:10,892 | INFO     | this job has now completed (state=finished)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,892 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,892 | INFO     | log transfer has been attempted: DONE
[2026-03-03 17:37:48] 2026-03-03 16:05:10,892 | INFO     | job 7036184109 has finished - writing final server update
[2026-03-03 17:37:48] 2026-03-03 16:05:10,893 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2389361/.job.ad'
[2026-03-03 17:37:48] 2026-03-03 16:05:10,893 | INFO     | total number of processed events: 400 (read)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,918 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7036184109/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,918 | INFO     | extracted standard info from prmon json
[2026-03-03 17:37:48] 2026-03-03 16:05:10,918 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 17:37:48] 2026-03-03 16:05:10,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 17:37:48] 2026-03-03 16:05:10,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 17:37:48] 2026-03-03 16:05:10,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 17:37:48] 2026-03-03 16:05:10,923 | INFO     | fitting pss+swap vs Time
[2026-03-03 17:37:48] 2026-03-03 16:05:10,923 | INFO     | sum of square deviations: 2480604650.0
[2026-03-03 17:37:48] 2026-03-03 16:05:10,924 | INFO     | sum of deviations: 26391556304.000004
[2026-03-03 17:37:48] 2026-03-03 16:05:10,925 | INFO     | mean x: 1772547782.5
[2026-03-03 17:37:48] 2026-03-03 16:05:10,925 | INFO     | mean y: 2335938.98
[2026-03-03 17:37:48] 2026-03-03 16:05:10,925 | INFO     | intersect: -18856088196.997936
[2026-03-03 17:37:48] 2026-03-03 16:05:10,925 | INFO     | chi2: 1.203396818469837
[2026-03-03 17:37:48] 2026-03-03 16:05:10,926 | INFO     | sum of square deviations: 2299168690.0
[2026-03-03 17:37:48] 2026-03-03 16:05:10,927 | INFO     | sum of deviations: 25617571833.999996
[2026-03-03 17:37:48] 2026-03-03 16:05:10,927 | INFO     | mean x: 1772547630.0
[2026-03-03 17:37:48] 2026-03-03 16:05:10,927 | INFO     | mean y: 2335288.2769230767
[2026-03-03 17:37:48] 2026-03-03 16:05:10,927 | INFO     | intersect: -19747571031.433548
[2026-03-03 17:37:48] 2026-03-03 16:05:10,927 | INFO     | chi2: 1.2039113575103781
[2026-03-03 17:37:48] 2026-03-03 16:05:10,928 | INFO     | current chi2=1.2039113575103781 (change=-0.0427572212793011 %)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,928 | INFO     | right removable region: 194
[2026-03-03 17:37:48] 2026-03-03 16:05:10,928 | INFO     | sum of square deviations: 2299168690.0
[2026-03-03 17:37:48] 2026-03-03 16:05:10,929 | INFO     | sum of deviations: 2227882382.0000005
[2026-03-03 17:37:48] 2026-03-03 16:05:10,929 | INFO     | mean x: 1772547935.0
[2026-03-03 17:37:48] 2026-03-03 16:05:10,930 | INFO     | mean y: 2355992.9435897437
[2026-03-03 17:37:48] 2026-03-03 16:05:10,930 | INFO     | intersect: -1715233644.0468924
[2026-03-03 17:37:48] 2026-03-03 16:05:10,930 | INFO     | chi2: 0.0022906068763133445
[2026-03-03 17:37:48] 2026-03-03 16:05:10,930 | INFO     | current chi2=0.0022906068763133445 (change=99.80965490009972 %)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,930 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 17:37:48] 2026-03-03 16:05:10,932 | INFO     | sum of deviations: 1601171431.9999998
[2026-03-03 17:37:48] 2026-03-03 16:05:10,932 | INFO     | mean x: 1772548087.5
[2026-03-03 17:37:48] 2026-03-03 16:05:10,932 | INFO     | mean y: 2356545.2210526317
[2026-03-03 17:37:48] 2026-03-03 16:05:10,932 | INFO     | intersect: -1332112986.40099
[2026-03-03 17:37:48] 2026-03-03 16:05:10,932 | INFO     | chi2: 0.002002848147814007
[2026-03-03 17:37:48] 2026-03-03 16:05:10,932 | INFO     | current chi2=0.002002848147814007 (change=12.562554119390215 %)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,933 | INFO     | left removable region: 20
[2026-03-03 17:37:48] 2026-03-03 16:05:10,933 | INFO     | sum of square deviations: 1633472487.5
[2026-03-03 17:37:48] 2026-03-03 16:05:10,934 | INFO     | sum of deviations: 1368071186.5000002
[2026-03-03 17:37:48] 2026-03-03 16:05:10,934 | INFO     | mean x: 1772548209.5
[2026-03-03 17:37:48] 2026-03-03 16:05:10,934 | INFO     | mean y: 2356449.293103448
[2026-03-03 17:37:48] 2026-03-03 16:05:10,934 | INFO     | intersect: -1482193887.8910213
[2026-03-03 17:37:48] 2026-03-03 16:05:10,935 | INFO     | chi2: 0.0019488009411841355
[2026-03-03 17:37:48] 2026-03-03 16:05:10,935 | INFO     | current memory leak: 0.84 B/s (using 174 data points, chi2=0.00)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,935 | INFO     | could have reported an average CPU frequency of 2736 MHz (10 samples)
[2026-03-03 17:37:48] 2026-03-03 16:05:10,935 | INFO     | ..............................
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . Timing measurements:
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . get job = 0 s
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . initial setup = 8 s
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . payload setup = 8 s
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . stage-in = 0 s
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . payload execution = 12196 s
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . stage-out = 1 s
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | . log creation = 0 s
[2026-03-03 17:37:48] 2026-03-03 16:05:10,936 | INFO     | ..............................
[2026-03-03 17:37:48] 2026-03-03 16:05:11,030 | INFO     | 
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | job summary report
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | --------------------------------------------------
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | PanDA job id: 7036184109
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | task id: 48838586
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | errors: (none)
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | pilot state: finished 
[2026-03-03 17:37:48] 2026-03-03 16:05:11,031 | INFO     | transexitcode: 0
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | exeerrorcode: 0
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | exeerrordiag: 
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | exitcode: 0
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | exitmsg: OK
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | cpuconsumptiontime: 45996 s
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | nevents: 400
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | neventsw: 0
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | pid: 3910897
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | pgrp: 3910897
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | corecount: 4
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | event service: False
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | sizes: {0: 2287032, 11: 2287032, 12209: 2317147, 12210: 2326167, 12213: 2326223, 12214: 2326417}
[2026-03-03 17:37:48] 2026-03-03 16:05:11,032 | INFO     | --------------------------------------------------
[2026-03-03 17:37:48] 2026-03-03 16:05:11,033 | INFO     | 
[2026-03-03 17:37:48] 2026-03-03 16:05:11,033 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2026-03-03 17:37:48] 2026-03-03 16:05:11,070 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,070 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,070 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,070 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,072 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 17:37:48] 2026-03-03 16:05:11,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,072 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 17:37:48] 2026-03-03 16:05:11,072 | INFO     | job 7036184109 has completed (purged errors)
[2026-03-03 17:37:48] 2026-03-03 16:05:11,072 | INFO     | overall cleanup function is called
[2026-03-03 17:37:48] 2026-03-03 16:05:12,082 | INFO     | --- collectZombieJob: --- 10, [3910897]
[2026-03-03 17:37:48] 2026-03-03 16:05:12,082 | INFO     | zombie collector waiting for pid 3910897
[2026-03-03 17:37:48] 2026-03-03 16:05:12,082 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 17:37:48] 2026-03-03 16:05:12,082 | INFO     | collected zombie processes
[2026-03-03 17:37:48] 2026-03-03 16:05:12,083 | INFO     | will attempt to kill all subprocesses of pid=3910897
[2026-03-03 17:37:48] 2026-03-03 16:05:12,917 | INFO     | process IDs to be killed: [3910897] (in reverse order)
[2026-03-03 17:37:48] 2026-03-03 16:05:13,250 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 17:37:48] 2026-03-03 16:05:13,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 17:37:48] 2026-03-03 16:05:13,282 | INFO     | did not find any defunct processes belonging to 3910897
[2026-03-03 17:37:48] 2026-03-03 16:05:13,311 | INFO     | did not find any defunct processes belonging to 3910897
[2026-03-03 17:37:48] 2026-03-03 16:05:13,311 | INFO     | ready for new job
[2026-03-03 17:37:48] 2026-03-03 16:05:13,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 17:37:48] 2026-03-03 16:05:13,314 | INFO     | **************************************
[2026-03-03 17:37:48] 2026-03-03 16:05:13,314 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 17:37:48] 2026-03-03 16:05:13,314 | INFO     | **************************************
[2026-03-03 17:37:48] 2026-03-03 16:05:13,314 | INFO     | 
[2026-03-03 17:37:48] 2026-03-03 16:05:13,323 | INFO     | architecture information:
[2026-03-03 17:37:48] 2026-03-03 16:05:13,324 | INFO     | executing command: cat /etc/os-release
[2026-03-03 17:37:48] 2026-03-03 16:05:13,350 | INFO     | cat /etc/os-release:
[2026-03-03 17:37:48] NAME="CentOS Linux"
[2026-03-03 17:37:48] VERSION="7 (Core)"
[2026-03-03 17:37:48] ID="centos"
[2026-03-03 17:37:48] ID_LIKE="rhel fedora"
[2026-03-03 17:37:48] VERSION_ID="7"
[2026-03-03 17:37:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 17:37:48] ANSI_COLOR="0;31"
[2026-03-03 17:37:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 17:37:48] HOME_URL="https://www.centos.org/"
[2026-03-03 17:37:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 17:37:48] 
[2026-03-03 17:37:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 17:37:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 17:37:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 17:37:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 17:37:48] 
[2026-03-03 17:37:48] 2026-03-03 16:05:13,351 | INFO     | **************************************
[2026-03-03 17:37:48] 2026-03-03 16:05:13,854 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2026-03-03 17:37:48] 2026-03-03 16:05:13,882 | INFO     | sufficient remaining disk space (3318599385088 B)
[2026-03-03 17:37:48] 2026-03-03 16:05:13,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 17:37:48] 2026-03-03 16:05:13,883 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 17:37:48] 2026-03-03 16:05:13,883 | INFO     | update_server=False
[2026-03-03 17:37:48] 2026-03-03 16:05:13,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 17:37:48] 2026-03-03 16:05:14,146 | INFO     | all data control threads have been joined
[2026-03-03 17:37:48] 2026-03-03 16:05:14,158 | INFO     | all job control threads have been joined
[2026-03-03 17:37:48] 2026-03-03 16:05:14,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:37:48] 2026-03-03 16:05:14,707 | INFO     | aborting loop
[2026-03-03 17:37:48] 2026-03-03 16:05:14,888 | INFO     | [job] retrieve thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:14,901 | INFO     | [payload] validate_post thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:14,909 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:14,937 | INFO     | all payload control threads have been joined
[2026-03-03 17:37:48] 2026-03-03 16:05:15,064 | INFO     | [data] copytool_in thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,153 | INFO     | [data] control thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,164 | INFO     | [job] control thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 17:37:48] 2026-03-03 16:05:15,399 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,515 | INFO     | [job] validate thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,560 | INFO     | [payload] failed_post thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,711 | INFO     | [job] job monitor thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,801 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:15,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 17:37:48] 2026-03-03 16:05:15,942 | INFO     | [payload] control thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:16,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:37:48] 2026-03-03 16:05:17,041 | INFO     | [job] queue monitor thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:17,276 | INFO     | [data] copytool_out thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:19,909 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:24,625 | INFO     | job.realtimelogging is not enabled
[2026-03-03 17:37:48] 2026-03-03 16:05:25,630 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 17:37:48] 2026-03-03 16:05:43,329 | INFO     | PID=3899891 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 17:37:48] 2026-03-03 16:05:43,329 | INFO     | .. there are 17 such processes running
[2026-03-03 17:37:48] 2026-03-03 16:05:43,329 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 17:37:48] 2026-03-03 16:05:43,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 17:37:48] 2026-03-03 16:05:43,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 17:37:48] 2026-03-03 16:05:45,775 | INFO     | [monitor] cgroup control has ended
[2026-03-03 17:37:48] 2026-03-03 16:05:45,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22869507315520)>', '<ExcThread(monitor, started 22869259314944)>']
[2026-03-03 17:37:48] 2026-03-03 16:05:46,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 17:37:48] 2026-03-03 16:05:46,345 | INFO     | [monitor] control thread has ended
[2026-03-03 17:37:48] 2026-03-03 16:05:50,805 | INFO     | all workflow threads have been joined
[2026-03-03 17:37:48] 2026-03-03 16:05:50,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 17:37:48] 2026-03-03 16:05:50,809 | INFO     | traces error code: 0
[2026-03-03 17:37:48] 2026-03-03 16:05:50,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 17:37:48] 2026-03-03 16:05:51,067 [wrapper] ==== pilot stdout END ====
[2026-03-03 17:37:48] 2026-03-03 16:05:51,080 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 17:37:48] 2026-03-03 16:05:51,087 [wrapper] pilotpid: 3899891
[2026-03-03 17:37:48] 2026-03-03 16:05:51,090 [wrapper] Pilot exit status: 0
[2026-03-03 17:37:48] 2026-03-03 16:05:51,106 [wrapper] pandaids: 7036184109
[2026-03-03 17:37:48] 2026-03-03 16:05:51,305 [wrapper] cleanup supervisor_pilot 4165372 3899892
[2026-03-03 17:37:48] 2026-03-03 16:05:51,310 [wrapper] Test setup, not cleaning
[2026-03-03 17:37:48] 2026-03-03 16:05:51,314 [wrapper] apfmon messages muted
[2026-03-03 17:37:48] 2026-03-03 16:05:51,317 [wrapper] ==== wrapper stdout END ====
[2026-03-03 17:37:48] 2026-03-03 16:05:51,321 [wrapper] ==== wrapper stderr END ====
[2026-03-03 17:37:48]  *** Error codes and diagnostics ***
[2026-03-03 17:37:48]     "exeErrorCode": 0,
[2026-03-03 17:37:48]     "exeErrorDiag": "",
[2026-03-03 17:37:48]     "pilotErrorCode": 0,
[2026-03-03 17:37:48]     "pilotErrorDiag": "",
[2026-03-03 17:37:48]  *** Listing of results directory ***
[2026-03-03 17:37:48] total 485544
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc    584627 Mar  3 04:05 pilot3.tar.gz
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc      5111 Mar  3 04:05 queuedata.json
[2026-03-03 17:37:48] -rwx------ 1 boinc boinc     36322 Mar  3 04:05 runpilot2-wrapper.sh
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc       100 Mar  3 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 17:37:48] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 13:40 run_atlas
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc       105 Mar  3 13:40 job.xml
[2026-03-03 17:37:48] -rw-r--r-- 2 boinc boinc 277577594 Mar  3 13:41 EVNT.48220221._000090.pool.root.1
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc      6697 Mar  3 13:41 init_data.xml
[2026-03-03 17:37:48] -rw-r--r-- 2 boinc boinc     15845 Mar  3 13:41 start_atlas.sh
[2026-03-03 17:37:48] drwxrwx--x 2 boinc boinc      4096 Mar  3 13:41 shared
[2026-03-03 17:37:48] -rw-r--r-- 2 boinc boinc    597958 Mar  3 13:41 input.tar.gz
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc         0 Mar  3 13:41 boinc_lockfile
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc      2561 Mar  3 13:41 pandaJob.out
[2026-03-03 17:37:48] -rw------- 1 boinc boinc    998442 Mar  3 13:41 agis_schedconf.cvmfs.json
[2026-03-03 17:37:48] -rw------- 1 boinc boinc       443 Mar  3 13:41 workernode_map.json
[2026-03-03 17:37:48] drwx------ 5 boinc boinc      4096 Mar  3 13:41 pilot3
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc       528 Mar  3 17:04 boinc_task_state.xml
[2026-03-03 17:37:48] -rw------- 1 boinc boinc 211583683 Mar  3 17:04 HITS.48838586._002315.pool.root.1
[2026-03-03 17:37:48] -rw------- 1 boinc boinc        95 Mar  3 17:04 pilot_heartbeat.json
[2026-03-03 17:37:48] -rw------- 1 boinc boinc      1025 Mar  3 17:05 memory_monitor_summary.json
[2026-03-03 17:37:48] -rw------- 1 boinc boinc   1516092 Mar  3 17:05 agis_ddmendpoints.agis.ALL.json
[2026-03-03 17:37:48] -rw------- 1 boinc boinc    379567 Mar  3 17:05 log.48838586._002315.job.log.tgz.1
[2026-03-03 17:37:48] -rw------- 1 boinc boinc      6348 Mar  3 17:05 heartbeat.json
[2026-03-03 17:37:48] -rw------- 1 boinc boinc      4903 Mar  3 17:05 pilotlog.txt
[2026-03-03 17:37:48] -rw------- 1 boinc boinc   1671844 Mar  3 17:05 log.48838586._002315.job.log.1
[2026-03-03 17:37:48] -rw------- 1 boinc boinc       357 Mar  3 17:05 output.list
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc       620 Mar  3 17:05 runtime_log
[2026-03-03 17:37:48] -rw------- 1 boinc boinc   2068480 Mar  3 17:05 result.tar.gz
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc      9205 Mar  3 17:05 runtime_log.err
[2026-03-03 17:37:48] -rw------- 1 boinc boinc       666 Mar  3 17:05 QtLNDmFGVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLQFLDm5aimRm.diag
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc        26 Mar  3 17:37 wrapper_checkpoint.txt
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc      8192 Mar  3 17:37 boinc_mmap_file
[2026-03-03 17:37:48] -rw-r--r-- 1 boinc boinc     21113 Mar  3 17:37 stderr.txt
[2026-03-03 17:37:48] HITS file was successfully produced:
[2026-03-03 17:37:48] -rw------- 1 boinc boinc 211583683 Mar  3 17:04 shared/HITS.pool.root.1
[2026-03-03 17:37:48]  *** Contents of shared directory: ***
[2026-03-03 17:37:48] total 480328
[2026-03-03 17:37:48] -rw-r--r-- 2 boinc boinc 277577594 Mar  3 13:41 ATLAS.root_0
[2026-03-03 17:37:48] -rw-r--r-- 2 boinc boinc     15845 Mar  3 13:41 start_atlas.sh
[2026-03-03 17:37:48] -rw-r--r-- 2 boinc boinc    597958 Mar  3 13:41 input.tar.gz
[2026-03-03 17:37:48] -rw------- 1 boinc boinc 211583683 Mar  3 17:04 HITS.pool.root.1
[2026-03-03 17:37:48] -rw------- 1 boinc boinc   2068480 Mar  3 17:05 result.tar.gz
17:37:50 (3895483): run_atlas exited; CPU time 46774.733347
17:37:50 (3895483): called boinc_finish(0)

</stderr_txt>
]]>

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