Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:22:50 (2514309): wrapper (7.7.26015): starting
12:22:50 (2514309): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 12:22:50] Arguments: --nthreads 4
[2026-03-04 12:22:50] Threads: 4
[2026-03-04 12:22:50] Checking for CVMFS
[2026-03-04 12:22:50] No cvmfs_config command found, will try listing directly
[2026-03-04 12:22:50] CVMFS is ok
[2026-03-04 12:22:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 12:22:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 12:22:50] Further information can be found at the LHC@home message board.
[2026-03-04 12:22:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 12:22:50] Checking for apptainer binary...
[2026-03-04 12:22:50] which: no apptainer in ((null))
[2026-03-04 12:22:50] apptainer is not installed, using version from CVMFS
[2026-03-04 12:22:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 12:22:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-04 12:22:50] apptainer works
[2026-03-04 12:22:50] Set ATHENA_PROC_NUMBER=4
[2026-03-04 12:22:50] Set ATHENA_CORE_NUMBER=4
[2026-03-04 12:22:50] Starting ATLAS job with PandaID=7036183407
[2026-03-04 12:22:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 14:14:25]  *** The last 200 lines of the pilot log: ***
[2026-03-04 14:14:25] 2026-03-04 13:13:35,257 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_546643/.job.ad'
[2026-03-04 14:14:25] 2026-03-04 13:13:35,257 | INFO     | total number of processed events: 400 (read)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,275 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7036183407/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,276 | INFO     | extracted standard info from prmon json
[2026-03-04 14:14:25] 2026-03-04 13:13:35,276 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 14:14:25] 2026-03-04 13:13:35,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 14:14:25] 2026-03-04 13:13:35,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 14:14:25] 2026-03-04 13:13:35,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 14:14:25] 2026-03-04 13:13:35,277 | INFO     | fitting pss+swap vs Time
[2026-03-04 14:14:25] 2026-03-04 13:13:35,277 | INFO     | sum of square deviations: 401533110.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | sum of deviations: 1852304406.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | mean x: 1772626702.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | mean y: 2325408.899082569
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | intersect: -8174943584.703585
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | chi2: 1.921249993422935
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | sum of square deviations: 348769330.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | sum of deviations: 8533688970.5
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | mean x: 1772626549.5
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | mean y: 2343971.3365384615
[2026-03-04 14:14:25] 2026-03-04 13:13:35,278 | INFO     | intersect: -43370287544.98292
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | chi2: 1.099342334131385
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | current chi2=1.099342334131385 (change=42.77983927678375 %)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | sum of square deviations: 300842850.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | sum of deviations: 8123312781.999999
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | mean x: 1772626397.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | mean y: 2342665.505050505
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | intersect: -47861845127.093994
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | chi2: 1.1013435623112364
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | current chi2=1.1013435623112364 (change=-0.1820386714601137 %)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | right removable region: 98
[2026-03-04 14:14:25] 2026-03-04 13:13:35,279 | INFO     | sum of square deviations: 348769330.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | sum of deviations: -7848783196.999999
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | mean x: 1772626854.5
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | mean y: 2352531.653846154
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | intersect: 39893944691.29289
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | chi2: 0.8548728280149993
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | current chi2=0.8548728280149993 (change=55.504341915861666 %)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | sum of square deviations: 300842850.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | sum of deviations: -7454227572.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | mean x: 1772627007.0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | mean y: 2351273.4545454546
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | intersect: 43924169958.695816
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | chi2: 0.8561141977291573
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | current chi2=0.8561141977291573 (change=-0.14521103882087852 %)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | left removable region: 20
[2026-03-04 14:14:25] 2026-03-04 13:13:35,280 | INFO     | sum of square deviations: 147126479.5
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | sum of deviations: -628100499.5
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | mean x: 1772626976.5
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | mean y: 2372057.935897436
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | intersect: 7569928171.224293
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | chi2: 0.00022384619816899124
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | current memory leak: -4.27 B/s (using 78 data points, chi2=0.00)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | could have reported an average CPU frequency of 3558 MHz (7 samples)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | ..............................
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . Timing measurements:
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . get job = 0 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . initial setup = 6 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . payload setup = 6 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . stage-in = 0 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . payload execution = 6603 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . stage-out = 0 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | . log creation = 0 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,281 | INFO     | ..............................
[2026-03-04 14:14:25] 2026-03-04 13:13:35,282 | INFO     | monitor loop #473: job 0:7036183407 is in state 'finished'
[2026-03-04 14:14:25] 2026-03-04 13:13:35,292 | WARNING  | exception caught: deque index out of range
[2026-03-04 14:14:25] 2026-03-04 13:13:35,614 | INFO     | 
[2026-03-04 14:14:25] 2026-03-04 13:13:35,614 | INFO     | job summary report
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | --------------------------------------------------
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | PanDA job id: 7036183407
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | task id: 48787024
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | errors: (none)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | pilot state: finished 
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | transexitcode: 0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | exeerrorcode: 0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | exeerrordiag: 
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | exitcode: 0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | exitmsg: OK
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | cpuconsumptiontime: 25432 s
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | nevents: 400
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | neventsw: 0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | pid: 2537162
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | pgrp: 2537162
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | corecount: 4
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | event service: False
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | sizes: {0: 2286618, 1: 2287079, 11: 2287079, 6614: 2323251, 6617: 2323251, 6619: 2323445}
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | --------------------------------------------------
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | 
[2026-03-04 14:14:25] 2026-03-04 13:13:35,615 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,637 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,637 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 14:14:25] 2026-03-04 13:13:35,637 | INFO     | job 7036183407 has completed (purged errors)
[2026-03-04 14:14:25] 2026-03-04 13:13:35,637 | INFO     | overall cleanup function is called
[2026-03-04 14:14:25] 2026-03-04 13:13:36,644 | INFO     | --- collectZombieJob: --- 10, [2537162]
[2026-03-04 14:14:25] 2026-03-04 13:13:36,644 | INFO     | zombie collector waiting for pid 2537162
[2026-03-04 14:14:25] 2026-03-04 13:13:36,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 14:14:25] 2026-03-04 13:13:36,644 | INFO     | collected zombie processes
[2026-03-04 14:14:25] 2026-03-04 13:13:36,644 | INFO     | will attempt to kill all subprocesses of pid=2537162
[2026-03-04 14:14:25] 2026-03-04 13:13:37,159 | INFO     | process IDs to be killed: [2537162] (in reverse order)
[2026-03-04 14:14:25] 2026-03-04 13:13:37,388 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 14:14:25] 2026-03-04 13:13:37,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 14:14:25] 2026-03-04 13:13:37,431 | INFO     | did not find any defunct processes belonging to 2537162
[2026-03-04 14:14:25] 2026-03-04 13:13:37,471 | INFO     | did not find any defunct processes belonging to 2537162
[2026-03-04 14:14:25] 2026-03-04 13:13:37,471 | INFO     | ready for new job
[2026-03-04 14:14:25] 2026-03-04 13:13:37,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 14:14:25] 2026-03-04 13:13:37,473 | INFO     | **************************************
[2026-03-04 14:14:25] 2026-03-04 13:13:37,473 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 14:14:25] 2026-03-04 13:13:37,473 | INFO     | **************************************
[2026-03-04 14:14:25] 2026-03-04 13:13:37,473 | INFO     | 
[2026-03-04 14:14:25] 2026-03-04 13:13:37,480 | INFO     | architecture information:
[2026-03-04 14:14:25] 2026-03-04 13:13:37,481 | INFO     | executing command: cat /etc/os-release
[2026-03-04 14:14:25] 2026-03-04 13:13:37,497 | INFO     | cat /etc/os-release:
[2026-03-04 14:14:25] NAME="CentOS Linux"
[2026-03-04 14:14:25] VERSION="7 (Core)"
[2026-03-04 14:14:25] ID="centos"
[2026-03-04 14:14:25] ID_LIKE="rhel fedora"
[2026-03-04 14:14:25] VERSION_ID="7"
[2026-03-04 14:14:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 14:14:25] ANSI_COLOR="0;31"
[2026-03-04 14:14:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 14:14:25] HOME_URL="https://www.centos.org/"
[2026-03-04 14:14:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 14:14:25] 
[2026-03-04 14:14:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 14:14:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 14:14:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 14:14:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 14:14:25] 
[2026-03-04 14:14:25] 2026-03-04 13:13:37,497 | INFO     | **************************************
[2026-03-04 14:14:25] 2026-03-04 13:13:37,999 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-03-04 14:14:25] 2026-03-04 13:13:38,013 | INFO     | sufficient remaining disk space (22254977024 B)
[2026-03-04 14:14:25] 2026-03-04 13:13:38,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 14:14:25] 2026-03-04 13:13:38,013 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 14:14:25] 2026-03-04 13:13:38,013 | INFO     | update_server=False
[2026-03-04 14:14:25] 2026-03-04 13:13:38,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 14:14:25] 2026-03-04 13:13:38,582 | INFO     | all job control threads have been joined
[2026-03-04 14:14:25] 2026-03-04 13:13:38,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 14:14:25] 2026-03-04 13:13:38,810 | INFO     | aborting loop
[2026-03-04 14:14:25] 2026-03-04 13:13:38,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 14:14:25] 2026-03-04 13:13:38,882 | INFO     | all data control threads have been joined
[2026-03-04 14:14:25] 2026-03-04 13:13:39,018 | INFO     | [data] copytool_in thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:39,018 | INFO     | [job] retrieve thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:39,111 | INFO     | [payload] validate_post thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:39,286 | INFO     | all payload control threads have been joined
[2026-03-04 14:14:25] 2026-03-04 13:13:39,467 | INFO     | [payload] failed_post thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:39,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 14:14:25] 2026-03-04 13:13:39,587 | INFO     | [job] control thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:39,815 | INFO     | [job] job monitor thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:39,886 | INFO     | [data] control thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:39,963 | INFO     | [job] validate thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:40,060 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:40,066 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:40,181 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:40,243 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:40,291 | INFO     | [payload] control thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:40,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 14:14:25] 2026-03-04 13:13:40,822 | INFO     | [data] copytool_out thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:41,344 | INFO     | [job] queue monitor thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:13:43,538 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 14:14:25] 2026-03-04 13:14:07,434 | INFO     | PID=2522190 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 14:14:25] 2026-03-04 13:14:07,434 | INFO     | .. there are 33 such processes running
[2026-03-04 14:14:25] 2026-03-04 13:14:07,435 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 14:14:25] 2026-03-04 13:14:07,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 14:14:25] 2026-03-04 13:14:07,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 14:14:25] 2026-03-04 13:14:16,291 | INFO     | [monitor] cgroup control has ended
[2026-03-04 14:14:25] 2026-03-04 13:14:17,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22934333908800)>', '<ExcThread(monitor, started 22934088578816)>']
[2026-03-04 14:14:25] 2026-03-04 13:14:18,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 14:14:25] 2026-03-04 13:14:18,489 | INFO     | [monitor] control thread has ended
[2026-03-04 14:14:25] 2026-03-04 13:14:22,528 | INFO     | all workflow threads have been joined
[2026-03-04 14:14:25] 2026-03-04 13:14:22,528 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 14:14:25] 2026-03-04 13:14:22,528 | INFO     | traces error code: 0
[2026-03-04 14:14:25] 2026-03-04 13:14:22,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 14:14:25] 2026-03-04 13:14:22,689 [wrapper] ==== pilot stdout END ====
[2026-03-04 14:14:25] 2026-03-04 13:14:22,692 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 14:14:25] 2026-03-04 13:14:22,696 [wrapper] pilotpid: 2522190
[2026-03-04 14:14:25] 2026-03-04 13:14:22,698 [wrapper] Pilot exit status: 0
[2026-03-04 14:14:25] 2026-03-04 13:14:22,706 [wrapper] pandaids: 7036183407
[2026-03-04 14:14:25] 2026-03-04 13:14:22,849 [wrapper] cleanup supervisor_pilot 3173670 2522191
[2026-03-04 14:14:25] 2026-03-04 13:14:22,852 [wrapper] Test setup, not cleaning
[2026-03-04 14:14:25] 2026-03-04 13:14:22,854 [wrapper] apfmon messages muted
[2026-03-04 14:14:25] 2026-03-04 13:14:22,857 [wrapper] ==== wrapper stdout END ====
[2026-03-04 14:14:25] 2026-03-04 13:14:22,859 [wrapper] ==== wrapper stderr END ====
[2026-03-04 14:14:25]  *** Error codes and diagnostics ***
[2026-03-04 14:14:25]     "exeErrorCode": 0,
[2026-03-04 14:14:25]     "exeErrorDiag": "",
[2026-03-04 14:14:25]     "pilotErrorCode": 0,
[2026-03-04 14:14:25]     "pilotErrorDiag": "",
[2026-03-04 14:14:25]  *** Listing of results directory ***
[2026-03-04 14:14:25] total 498128
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc    584627 Mar  3 04:05 pilot3.tar.gz
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc      5111 Mar  3 04:05 queuedata.json
[2026-03-04 14:14:25] -rwx------. 1 boinc boinc     36322 Mar  3 04:05 runpilot2-wrapper.sh
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc       100 Mar  4 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 14:14:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 12:22 run_atlas
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc       105 Mar  4 12:22 job.xml
[2026-03-04 14:14:25] -rw-r--r--. 2 boinc boinc 298414226 Mar  4 12:22 EVNT.48787020._000014.pool.root.1
[2026-03-04 14:14:25] -rw-r--r--. 2 boinc boinc     15845 Mar  4 12:22 start_atlas.sh
[2026-03-04 14:14:25] drwxrwx--x. 2 boinc boinc      4096 Mar  4 12:22 shared
[2026-03-04 14:14:25] -rw-r--r--. 2 boinc boinc    597981 Mar  4 12:22 input.tar.gz
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc      6708 Mar  4 12:22 init_data.xml
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc         0 Mar  4 12:22 boinc_lockfile
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc      2596 Mar  4 12:22 pandaJob.out
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc    997352 Mar  4 12:22 agis_schedconf.cvmfs.json
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc   1516092 Mar  4 12:22 agis_ddmendpoints.agis.ALL.json
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc       445 Mar  4 12:23 workernode_map.json
[2026-03-04 14:14:25] drwx------. 5 boinc boinc      4096 Mar  4 12:23 pilot3
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc 205273875 Mar  4 14:13 HITS.48787024._000613.pool.root.1
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc      1033 Mar  4 14:13 memory_monitor_summary.json
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc        95 Mar  4 14:13 pilot_heartbeat.json
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc    280591 Mar  4 14:13 log.48787024._000613.job.log.tgz.1
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc      6349 Mar  4 14:13 heartbeat.json
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc       529 Mar  4 14:13 boinc_task_state.xml
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc        27 Mar  4 14:14 wrapper_checkpoint.txt
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc      4830 Mar  4 14:14 pilotlog.txt
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc    949270 Mar  4 14:14 log.48787024._000613.job.log.1
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc       357 Mar  4 14:14 output.list
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc       620 Mar  4 14:14 runtime_log
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc   1249280 Mar  4 14:14 result.tar.gz
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc       660 Mar  4 14:14 yvFODmxFVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfNFLDmuSYE0m.diag
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc      9221 Mar  4 14:14 runtime_log.err
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc      8192 Mar  4 14:14 boinc_mmap_file
[2026-03-04 14:14:25] -rw-r--r--. 1 boinc boinc     20868 Mar  4 14:14 stderr.txt
[2026-03-04 14:14:25] HITS file was successfully produced:
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc 205273875 Mar  4 14:13 shared/HITS.pool.root.1
[2026-03-04 14:14:25]  *** Contents of shared directory: ***
[2026-03-04 14:14:25] total 493716
[2026-03-04 14:14:25] -rw-r--r--. 2 boinc boinc 298414226 Mar  4 12:22 ATLAS.root_0
[2026-03-04 14:14:25] -rw-r--r--. 2 boinc boinc     15845 Mar  4 12:22 start_atlas.sh
[2026-03-04 14:14:25] -rw-r--r--. 2 boinc boinc    597981 Mar  4 12:22 input.tar.gz
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc 205273875 Mar  4 14:13 HITS.pool.root.1
[2026-03-04 14:14:25] -rw-------. 1 boinc boinc   1249280 Mar  4 14:14 result.tar.gz
14:14:26 (2514309): run_atlas exited; CPU time 25747.005729
14:14:26 (2514309): called boinc_finish(0)

</stderr_txt>
]]>

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