Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:39:43 (1605566): wrapper (7.7.26015): starting
07:39:43 (1605566): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 07:39:43] Arguments: --nthreads 12
[2026-03-03 07:39:43] Threads: 12
[2026-03-03 07:39:43] Checking for CVMFS
[2026-03-03 07:39:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 07:39:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 07:39:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 07:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 07:39:45] 2.13.3.0 2136 2534 50660 156849 3 50 2903054 4096000 918 130560 0 4835414 99.992 227763 1255 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 07:39:45] CVMFS is ok
[2026-03-03 07:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 07:39:45] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 07:39:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 07:39:45] Further information can be found at the LHC@home message board.
[2026-03-03 07:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 07:39:45] Checking for apptainer binary...
[2026-03-03 07:39:45] apptainer is not installed, using version from CVMFS
[2026-03-03 07:39:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 07:39:45] boinc
[2026-03-03 07:39:45] apptainer works
[2026-03-03 07:39:45] Set ATHENA_PROC_NUMBER=12
[2026-03-03 07:39:45] Set ATHENA_CORE_NUMBER=12
[2026-03-03 07:39:45] Starting ATLAS job with PandaID=7032738737
[2026-03-03 07:39:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 09:04:12]  *** The last 200 lines of the pilot log: ***
[2026-03-03 09:04:12]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/log.48843758._000009.job.log.tgz.1
[2026-03-03 09:04:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/e2/log.48843758._000009.job.log.tgz.1
[2026-03-03 09:04:12]  workdir=None
[2026-03-03 09:04:12] ]
[2026-03-03 09:04:12] 2026-03-03 17:03:07,578 | INFO     | transferring file log.48843758._000009.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/log.48843758._000009.job.log.tgz.1 to /var/lib/boinc
[2026-03-03 09:04:12] 2026-03-03 17:03:07,578 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/log.48843758._000009.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.488437
[2026-03-03 09:04:12] 2026-03-03 17:03:07,596 | INFO     | adding to output.list: log.48843758._000009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/e2/log.48843758._000009.job.log.tg
[2026-03-03 09:04:12] 2026-03-03 17:03:07,596 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 09:04:12] 2026-03-03 17:03:07,596 | INFO     | summary of transferred files:
[2026-03-03 09:04:12] 2026-03-03 17:03:07,596 | INFO     |  -- lfn=log.48843758._000009.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 09:04:12] 2026-03-03 17:03:07,596 | INFO     | stage-out finished correctly
[2026-03-03 09:04:12] 2026-03-03 17:03:07,634 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 09:04:12] 2026-03-03 17:03:07,867 | INFO     | time since job start (4987s) is within the limit (349056.0s)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,701 | WARNING  | process 1614252 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 09:04:12] 2026-03-03 17:03:08,701 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,702 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,702 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 09:04:12] 2026-03-03 17:03:08,702 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 09:04:12] 2026-03-03 17:03:08,703 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4040414 B
[2026-03-03 09:04:12] 2026-03-03 17:03:08,703 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 17281 B
[2026-03-03 09:04:12] 2026-03-03 17:03:08,703 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-03 09:04:12] 2026-03-03 17:03:08,719 | INFO     | sufficient remaining disk space (2023673036800 B)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,719 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,720 | INFO     | size of work directory /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737: 4340773 B (within 5033164800 B limit)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,720 | INFO     | pfn file=/var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/HITS.48843758._000009.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,720 | INFO     | total size of present files: 0 B (workdir size: 4340773 B)
[2026-03-03 09:04:12] 2026-03-03 17:03:08,720 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/HITS.48843758._000009.pool.root.1 since it does not exist
[2026-03-03 09:04:12] 2026-03-03 17:03:08,787 | INFO     | number of running child processes to parent process 1614252: 1
[2026-03-03 09:04:12] 2026-03-03 17:03:08,788 | INFO     | maximum number of monitored processes: 6
[2026-03-03 09:04:12] 2026-03-03 17:03:09,196 | INFO     | job 7032738737 has state=finished
[2026-03-03 09:04:12] 2026-03-03 17:03:09,196 | INFO     | preparing for final server update for job 7032738737 in state='finished'
[2026-03-03 09:04:12] 2026-03-03 17:03:09,196 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/jobReport.json
[2026-03-03 09:04:12] 2026-03-03 17:03:09,198 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-03 09:04:12] 2026-03-03 17:03:09,198 | INFO     | this job has now completed (state=finished)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,198 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,198 | INFO     | log transfer has been attempted: DONE
[2026-03-03 09:04:12] 2026-03-03 17:03:09,198 | INFO     | job 7032738737 has finished - writing final server update
[2026-03-03 09:04:12] 2026-03-03 17:03:09,198 | INFO     | total number of processed events: 400 (read)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,201 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7032738737/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,201 | INFO     | extracted standard info from prmon json
[2026-03-03 09:04:12] 2026-03-03 17:03:09,201 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 09:04:12] 2026-03-03 17:03:09,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 09:04:12] 2026-03-03 17:03:09,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 09:04:12] 2026-03-03 17:03:09,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 09:04:12] 2026-03-03 17:03:09,202 | INFO     | fitting pss+swap vs Time
[2026-03-03 09:04:12] 2026-03-03 17:03:09,202 | INFO     | sum of square deviations: 130793150.0
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | sum of deviations: -14879340087.999994
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | mean x: 1772554980.0
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | mean y: 2846840.7866666666
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | intersect: 201652920809.4771
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | chi2: 0.08965661584605882
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | current memory leak: -113.76 B/s (using 75 data points, chi2=0.09)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | could have reported an average CPU frequency of 2893 MHz (6 samples)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | ..............................
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . Timing measurements:
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . get job = 0 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . initial setup = 6 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . payload setup = 3 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . stage-in = 0 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . payload execution = 4968 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . stage-out = 0 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | . log creation = 0 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,203 | INFO     | ..............................
[2026-03-03 09:04:12] 2026-03-03 17:03:09,734 | INFO     | 
[2026-03-03 09:04:12] 2026-03-03 17:03:09,734 | INFO     | job summary report
[2026-03-03 09:04:12] 2026-03-03 17:03:09,734 | INFO     | --------------------------------------------------
[2026-03-03 09:04:12] 2026-03-03 17:03:09,734 | INFO     | PanDA job id: 7032738737
[2026-03-03 09:04:12] 2026-03-03 17:03:09,734 | INFO     | task id: 48843758
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | errors: (none)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | pilot state: finished 
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | transexitcode: 0
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | exeerrorcode: 0
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | exeerrordiag: 
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | exitcode: 0
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | exitmsg: OK
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | cpuconsumptiontime: 54816 s
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | nevents: 400
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | neventsw: 0
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | pid: 1614252
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | pgrp: 1614252
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | corecount: 12
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | event service: False
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | sizes: {0: 2286717, 1: 2287178, 11: 2287178, 4976: 2313552, 4977: 2322620, 4978: 2322786}
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | --------------------------------------------------
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | 
[2026-03-03 09:04:12] 2026-03-03 17:03:09,735 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | job 7032738737 has completed (purged errors)
[2026-03-03 09:04:12] 2026-03-03 17:03:09,753 | INFO     | overall cleanup function is called
[2026-03-03 09:04:12] 2026-03-03 17:03:10,761 | INFO     | --- collectZombieJob: --- 10, [1614252]
[2026-03-03 09:04:12] 2026-03-03 17:03:10,762 | INFO     | zombie collector waiting for pid 1614252
[2026-03-03 09:04:12] 2026-03-03 17:03:10,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 09:04:12] 2026-03-03 17:03:10,762 | INFO     | collected zombie processes
[2026-03-03 09:04:12] 2026-03-03 17:03:10,762 | INFO     | will attempt to kill all subprocesses of pid=1614252
[2026-03-03 09:04:12] 2026-03-03 17:03:10,832 | INFO     | process IDs to be killed: [1614252] (in reverse order)
[2026-03-03 09:04:12] 2026-03-03 17:03:10,867 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 09:04:12] 2026-03-03 17:03:10,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 09:04:12] 2026-03-03 17:03:10,870 | INFO     | did not find any defunct processes belonging to 1614252
[2026-03-03 09:04:12] 2026-03-03 17:03:10,871 | INFO     | did not find any defunct processes belonging to 1614252
[2026-03-03 09:04:12] 2026-03-03 17:03:10,872 | INFO     | ready for new job
[2026-03-03 09:04:12] 2026-03-03 17:03:10,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 09:04:12] 2026-03-03 17:03:10,873 | INFO     | **************************************
[2026-03-03 09:04:12] 2026-03-03 17:03:10,873 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 09:04:12] 2026-03-03 17:03:10,873 | INFO     | **************************************
[2026-03-03 09:04:12] 2026-03-03 17:03:10,873 | INFO     | 
[2026-03-03 09:04:12] 2026-03-03 17:03:10,874 | INFO     | pilot is running in a VM
[2026-03-03 09:04:12] 2026-03-03 17:03:10,874 | INFO     | architecture information:
[2026-03-03 09:04:12] 2026-03-03 17:03:10,874 | INFO     | executing command: cat /etc/os-release
[2026-03-03 09:04:12] 2026-03-03 17:03:10,889 | INFO     | cat /etc/os-release:
[2026-03-03 09:04:12] NAME="CentOS Linux"
[2026-03-03 09:04:12] VERSION="7 (Core)"
[2026-03-03 09:04:12] ID="centos"
[2026-03-03 09:04:12] ID_LIKE="rhel fedora"
[2026-03-03 09:04:12] VERSION_ID="7"
[2026-03-03 09:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 09:04:12] ANSI_COLOR="0;31"
[2026-03-03 09:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 09:04:12] HOME_URL="https://www.centos.org/"
[2026-03-03 09:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 09:04:12] 
[2026-03-03 09:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 09:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 09:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 09:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 09:04:12] 
[2026-03-03 09:04:12] 2026-03-03 17:03:10,889 | INFO     | **************************************
[2026-03-03 09:04:12] 2026-03-03 17:03:11,392 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-03 09:04:12] 2026-03-03 17:03:11,405 | INFO     | sufficient remaining disk space (2023678279680 B)
[2026-03-03 09:04:12] 2026-03-03 17:03:11,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 09:04:12] 2026-03-03 17:03:11,406 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 09:04:12] 2026-03-03 17:03:11,406 | INFO     | update_server=False
[2026-03-03 09:04:12] 2026-03-03 17:03:11,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 09:04:12] 2026-03-03 17:03:11,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 09:04:12] 2026-03-03 17:03:11,804 | INFO     | all job control threads have been joined
[2026-03-03 09:04:12] 2026-03-03 17:03:12,195 | INFO     | all payload control threads have been joined
[2026-03-03 09:04:12] 2026-03-03 17:03:12,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 09:04:12] 2026-03-03 17:03:12,292 | INFO     | aborting loop
[2026-03-03 09:04:12] 2026-03-03 17:03:12,293 | INFO     | all data control threads have been joined
[2026-03-03 09:04:12] 2026-03-03 17:03:12,387 | INFO     | job.realtimelogging is not enabled
[2026-03-03 09:04:12] 2026-03-03 17:03:12,406 | INFO     | [job] retrieve thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:12,553 | INFO     | [payload] validate_post thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:12,631 | INFO     | [payload] failed_post thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:12,804 | INFO     | [job] control thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,200 | INFO     | [payload] control thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,297 | INFO     | [job] job monitor thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,298 | INFO     | [data] control thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,393 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,412 | INFO     | [data] copytool_out thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,430 | INFO     | [data] copytool_in thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,430 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,430 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,655 | INFO     | [job] validate thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:13,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 09:04:12] 2026-03-03 17:03:13,719 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:14,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 09:04:12] 2026-03-03 17:03:15,258 | INFO     | [job] queue monitor thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:17,683 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 09:04:12] 2026-03-03 17:03:41,062 | INFO     | PID=1609719 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 09:04:12] 2026-03-03 17:03:41,062 | INFO     | .. there are 2 such processes running
[2026-03-03 09:04:12] 2026-03-03 17:03:41,062 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 09:04:12] 2026-03-03 17:03:41,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 09:04:12] 2026-03-03 17:03:41,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 09:04:12] 2026-03-03 17:04:06,410 | INFO     | [monitor] cgroup control has ended
[2026-03-03 09:04:12] 2026-03-03 17:04:07,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137165838837568)>', '<ExcThread(monitor, started 137165073803008)>']
[2026-03-03 09:04:12] 2026-03-03 17:04:08,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 09:04:12] 2026-03-03 17:04:08,176 | INFO     | [monitor] control thread has ended
[2026-03-03 09:04:12] 2026-03-03 17:04:12,442 | INFO     | all workflow threads have been joined
[2026-03-03 09:04:12] 2026-03-03 17:04:12,442 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 09:04:12] 2026-03-03 17:04:12,442 | INFO     | traces error code: 0
[2026-03-03 09:04:12] 2026-03-03 17:04:12,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 09:04:12] 2026-03-03 17:04:12,528 [wrapper] ==== pilot stdout END ====
[2026-03-03 09:04:12] 2026-03-03 17:04:12,530 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 09:04:12] 2026-03-03 17:04:12,532 [wrapper] pilotpid: 1609719
[2026-03-03 09:04:12] 2026-03-03 17:04:12,534 [wrapper] Pilot exit status: 0
[2026-03-03 09:04:12] 2026-03-03 17:04:12,542 [wrapper] pandaids: 7032738737
[2026-03-03 09:04:12] 2026-03-03 17:04:12,564 [wrapper] cleanup supervisor_pilot 1632415 1609720
[2026-03-03 09:04:12] 2026-03-03 17:04:12,565 [wrapper] Test setup, not cleaning
[2026-03-03 09:04:12] 2026-03-03 17:04:12,567 [wrapper] apfmon messages muted
[2026-03-03 09:04:12] 2026-03-03 17:04:12,569 [wrapper] ==== wrapper stdout END ====
[2026-03-03 09:04:12] 2026-03-03 17:04:12,571 [wrapper] ==== wrapper stderr END ====
[2026-03-03 09:04:12]  *** Error codes and diagnostics ***
[2026-03-03 09:04:12]     "exeErrorCode": 0,
[2026-03-03 09:04:12]     "exeErrorDiag": "",
[2026-03-03 09:04:12]     "pilotErrorCode": 0,
[2026-03-03 09:04:12]     "pilotErrorDiag": "",
[2026-03-03 09:04:12]  *** Listing of results directory ***
[2026-03-03 09:04:12] total 412052
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc    584627 Feb 27 21:38 pilot3.tar.gz
[2026-03-03 09:04:12] -rwx------ 1 boinc boinc     36322 Feb 27 21:40 runpilot2-wrapper.sh
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc      5111 Feb 27 21:41 queuedata.json
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc       100 Mar  3 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 09:04:12] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 07:39 run_atlas
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc       105 Mar  3 07:39 job.xml
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc      6532 Mar  3 07:39 init_data.xml
[2026-03-03 09:04:12] -rw-r--r-- 2 boinc boinc 208103596 Mar  3 07:39 EVNT.48451723._000001.pool.root.1
[2026-03-03 09:04:12] -rw-r--r-- 2 boinc boinc     15845 Mar  3 07:39 start_atlas.sh
[2026-03-03 09:04:12] drwxrwx--x 2 boinc boinc      4096 Mar  3 07:39 shared
[2026-03-03 09:04:12] -rw-r--r-- 2 boinc boinc    597974 Mar  3 07:39 input.tar.gz
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc         0 Mar  3 07:39 boinc_lockfile
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc      2621 Mar  3 07:39 pandaJob.out
[2026-03-03 09:04:12] -rw------- 1 boinc boinc    998508 Mar  3 07:39 agis_schedconf.cvmfs.json
[2026-03-03 09:04:12] -rw------- 1 boinc boinc   1516104 Mar  3 07:39 agis_ddmendpoints.agis.ALL.json
[2026-03-03 09:04:12] -rw------- 1 boinc boinc       431 Mar  3 07:39 workernode_map.json
[2026-03-03 09:04:12] drwx------ 5 boinc boinc      4096 Mar  3 07:40 pilot3
[2026-03-03 09:04:12] -rw------- 1 boinc boinc 207629737 Mar  3 09:02 HITS.48843758._000009.pool.root.1
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc       529 Mar  3 09:02 boinc_task_state.xml
[2026-03-03 09:04:12] -rw------- 1 boinc boinc      1027 Mar  3 09:03 memory_monitor_summary.json
[2026-03-03 09:04:12] -rw------- 1 boinc boinc    386531 Mar  3 09:03 log.48843758._000009.job.log.tgz.1
[2026-03-03 09:04:12] -rw------- 1 boinc boinc      6338 Mar  3 09:03 heartbeat.json
[2026-03-03 09:04:12] -rw------- 1 boinc boinc        95 Mar  3 09:03 pilot_heartbeat.json
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc      8192 Mar  3 09:04 boinc_mmap_file
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc        27 Mar  3 09:04 wrapper_checkpoint.txt
[2026-03-03 09:04:12] -rw------- 1 boinc boinc      4962 Mar  3 09:04 pilotlog.txt
[2026-03-03 09:04:12] -rw------- 1 boinc boinc    751723 Mar  3 09:04 log.48843758._000009.job.log.1
[2026-03-03 09:04:12] -rw------- 1 boinc boinc       357 Mar  3 09:04 output.list
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc       620 Mar  3 09:04 runtime_log
[2026-03-03 09:04:12] -rw------- 1 boinc boinc   1157120 Mar  3 09:04 result.tar.gz
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc      8862 Mar  3 09:04 runtime_log.err
[2026-03-03 09:04:12] -rw------- 1 boinc boinc       635 Mar  3 09:04 jrMODmXFSG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqn4KDmsBYoBn.diag
[2026-03-03 09:04:12] -rw-r--r-- 1 boinc boinc     22692 Mar  3 09:04 stderr.txt
[2026-03-03 09:04:12] HITS file was successfully produced:
[2026-03-03 09:04:12] -rw------- 1 boinc boinc 207629737 Mar  3 09:02 shared/HITS.pool.root.1
[2026-03-03 09:04:12]  *** Contents of shared directory: ***
[2026-03-03 09:04:12] total 407728
[2026-03-03 09:04:12] -rw-r--r-- 2 boinc boinc 208103596 Mar  3 07:39 ATLAS.root_0
[2026-03-03 09:04:12] -rw-r--r-- 2 boinc boinc     15845 Mar  3 07:39 start_atlas.sh
[2026-03-03 09:04:12] -rw-r--r-- 2 boinc boinc    597974 Mar  3 07:39 input.tar.gz
[2026-03-03 09:04:12] -rw------- 1 boinc boinc 207629737 Mar  3 09:02 HITS.pool.root.1
[2026-03-03 09:04:12] -rw------- 1 boinc boinc   1157120 Mar  3 09:04 result.tar.gz
09:04:14 (1605566): run_atlas exited; CPU time 54854.671963
09:04:14 (1605566): called boinc_finish(0)

</stderr_txt>
]]>

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