Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:04:18 (1632546): wrapper (7.7.26015): starting
09:04:18 (1632546): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 09:04:18] Arguments: --nthreads 12
[2026-03-03 09:04:18] Threads: 12
[2026-03-03 09:04:18] Checking for CVMFS
[2026-03-03 09:04:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 09:04:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 09:04:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 09:04:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 09:04:20] 2.13.3.0 2136 2618 51280 156851 3 188 2915627 4096001 918 130560 0 4917497 99.992 230754 1207 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 09:04:20] CVMFS is ok
[2026-03-03 09:04:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 09:04:20] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 09:04:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 09:04:20] Further information can be found at the LHC@home message board.
[2026-03-03 09:04:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 09:04:20] Checking for apptainer binary...
[2026-03-03 09:04:20] apptainer is not installed, using version from CVMFS
[2026-03-03 09:04:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 09:04:20] boinc
[2026-03-03 09:04:20] apptainer works
[2026-03-03 09:04:20] Set ATHENA_PROC_NUMBER=12
[2026-03-03 09:04:20] Set ATHENA_CORE_NUMBER=12
[2026-03-03 09:04:20] Starting ATLAS job with PandaID=7036133855
[2026-03-03 09:04:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 09:42:45]  *** The last 200 lines of the pilot log: ***
[2026-03-03 09:42:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 09:42:45]  is_altstaged=None
[2026-03-03 09:42:45]  is_tar=False
[2026-03-03 09:42:45]  lfn=log.48838581._004171.job.log.tgz.1
[2026-03-03 09:42:45]  mtime=0
[2026-03-03 09:42:45]  protocol_id=None
[2026-03-03 09:42:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 09:42:45]  replicas=None
[2026-03-03 09:42:45]  scope=mc23_13p6TeV
[2026-03-03 09:42:45]  status=None
[2026-03-03 09:42:45]  status_code=0
[2026-03-03 09:42:45]  storage_token=
[2026-03-03 09:42:45]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7036133855/log.48838581._004171.job.log.tgz.1
[2026-03-03 09:42:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/fd/log.48838581._004171.job.log.tgz.1
[2026-03-03 09:42:45]  workdir=None
[2026-03-03 09:42:45] ]
[2026-03-03 09:42:45] 2026-03-03 17:41:48,194 | INFO     | transferring file log.48838581._004171.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7036133855/log.48838581._004171.job.log.tgz.1 to /var/lib/boinc
[2026-03-03 09:42:45] 2026-03-03 17:41:48,194 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7036133855/log.48838581._004171.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.488385
[2026-03-03 09:42:45] 2026-03-03 17:41:48,208 | INFO     | adding to output.list: log.48838581._004171.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/fd/log.48838581._004171.job.log.tg
[2026-03-03 09:42:45] 2026-03-03 17:41:48,208 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 09:42:45] 2026-03-03 17:41:48,208 | INFO     | summary of transferred files:
[2026-03-03 09:42:45] 2026-03-03 17:41:48,208 | INFO     |  -- lfn=log.48838581._004171.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 09:42:45] 2026-03-03 17:41:48,208 | INFO     | stage-out finished correctly
[2026-03-03 09:42:45] 2026-03-03 17:41:48,245 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 09:42:45] 2026-03-03 17:41:48,923 | INFO     | time since job start (2232s) is within the limit (349056.0s)
[2026-03-03 09:42:45] 2026-03-03 17:41:49,546 | INFO     | monitor loop #175: job 0:7036133855 is in state 'finished'
[2026-03-03 09:42:45] 2026-03-03 17:41:49,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,002 | INFO     | job 7036133855 has state=finished
[2026-03-03 09:42:45] 2026-03-03 17:41:50,002 | INFO     | preparing for final server update for job 7036133855 in state='finished'
[2026-03-03 09:42:45] 2026-03-03 17:41:50,002 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7036133855/jobReport.json
[2026-03-03 09:42:45] 2026-03-03 17:41:50,004 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-03 09:42:45] 2026-03-03 17:41:50,004 | INFO     | this job has now completed (state=finished)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,004 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,004 | INFO     | log transfer has been attempted: DONE
[2026-03-03 09:42:45] 2026-03-03 17:41:50,004 | INFO     | job 7036133855 has finished - writing final server update
[2026-03-03 09:42:45] 2026-03-03 17:41:50,005 | INFO     | total number of processed events: 400 (read)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,007 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7036133855/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,007 | INFO     | extracted standard info from prmon json
[2026-03-03 09:42:45] 2026-03-03 17:41:50,008 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 09:42:45] 2026-03-03 17:41:50,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 09:42:45] 2026-03-03 17:41:50,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 09:42:45] 2026-03-03 17:41:50,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | fitting pss+swap vs Time
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | sum of square deviations: 8362947.5
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | sum of deviations: -1336314647.5
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | mean x: 1772558683.5
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | mean y: 2811371.7
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | intersect: 283239807934.7379
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | chi2: 0.018389785125548733
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | current memory leak: -159.79 B/s (using 30 data points, chi2=0.02)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | could have reported an average CPU frequency of 2893 MHz (5 samples)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | ..............................
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | . Timing measurements:
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | . get job = 0 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | . initial setup = 5 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | . payload setup = 3 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | . stage-in = 0 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | . payload execution = 2213 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,009 | INFO     | . stage-out = 0 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,010 | INFO     | . log creation = 0 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,010 | INFO     | ..............................
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | 
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | job summary report
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | --------------------------------------------------
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | PanDA job id: 7036133855
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | task id: 48838581
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | errors: (none)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | pilot state: finished 
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | transexitcode: 0
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | exeerrorcode: 0
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | exeerrordiag: 
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | exitcode: 0
[2026-03-03 09:42:45] 2026-03-03 17:41:50,050 | INFO     | exitmsg: OK
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | cpuconsumptiontime: 24073 s
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | nevents: 400
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | neventsw: 0
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | pid: 1641229
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | pgrp: 1641229
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | corecount: 12
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | event service: False
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | sizes: {0: 2287106, 10: 2287106, 2219: 2312161, 2220: 2321229, 2222: 2321399}
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | --------------------------------------------------
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | 
[2026-03-03 09:42:45] 2026-03-03 17:41:50,051 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-03 09:42:45] 2026-03-03 17:41:50,068 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | job 7036133855 has completed (purged errors)
[2026-03-03 09:42:45] 2026-03-03 17:41:50,069 | INFO     | overall cleanup function is called
[2026-03-03 09:42:45] 2026-03-03 17:41:51,078 | INFO     | --- collectZombieJob: --- 10, [1641229]
[2026-03-03 09:42:45] 2026-03-03 17:41:51,078 | INFO     | zombie collector waiting for pid 1641229
[2026-03-03 09:42:45] 2026-03-03 17:41:51,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 09:42:45] 2026-03-03 17:41:51,078 | INFO     | collected zombie processes
[2026-03-03 09:42:45] 2026-03-03 17:41:51,079 | INFO     | will attempt to kill all subprocesses of pid=1641229
[2026-03-03 09:42:45] 2026-03-03 17:41:51,147 | INFO     | process IDs to be killed: [1641229] (in reverse order)
[2026-03-03 09:42:45] 2026-03-03 17:41:51,180 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 09:42:45] 2026-03-03 17:41:51,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 09:42:45] 2026-03-03 17:41:51,182 | INFO     | did not find any defunct processes belonging to 1641229
[2026-03-03 09:42:45] 2026-03-03 17:41:51,184 | INFO     | did not find any defunct processes belonging to 1641229
[2026-03-03 09:42:45] 2026-03-03 17:41:51,184 | INFO     | ready for new job
[2026-03-03 09:42:45] 2026-03-03 17:41:51,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 09:42:45] 2026-03-03 17:41:51,186 | INFO     | **************************************
[2026-03-03 09:42:45] 2026-03-03 17:41:51,186 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 09:42:45] 2026-03-03 17:41:51,186 | INFO     | **************************************
[2026-03-03 09:42:45] 2026-03-03 17:41:51,186 | INFO     | 
[2026-03-03 09:42:45] 2026-03-03 17:41:51,187 | INFO     | pilot is running in a VM
[2026-03-03 09:42:45] 2026-03-03 17:41:51,187 | INFO     | architecture information:
[2026-03-03 09:42:45] 2026-03-03 17:41:51,187 | INFO     | executing command: cat /etc/os-release
[2026-03-03 09:42:45] 2026-03-03 17:41:51,197 | INFO     | cat /etc/os-release:
[2026-03-03 09:42:45] NAME="CentOS Linux"
[2026-03-03 09:42:45] VERSION="7 (Core)"
[2026-03-03 09:42:45] ID="centos"
[2026-03-03 09:42:45] ID_LIKE="rhel fedora"
[2026-03-03 09:42:45] VERSION_ID="7"
[2026-03-03 09:42:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 09:42:45] ANSI_COLOR="0;31"
[2026-03-03 09:42:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 09:42:45] HOME_URL="https://www.centos.org/"
[2026-03-03 09:42:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 09:42:45] 
[2026-03-03 09:42:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 09:42:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 09:42:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 09:42:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 09:42:45] 
[2026-03-03 09:42:45] 2026-03-03 17:41:51,197 | INFO     | **************************************
[2026-03-03 09:42:45] 2026-03-03 17:41:51,700 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-03 09:42:45] 2026-03-03 17:41:51,712 | INFO     | sufficient remaining disk space (2023640530944 B)
[2026-03-03 09:42:45] 2026-03-03 17:41:51,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 09:42:45] 2026-03-03 17:41:51,713 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 09:42:45] 2026-03-03 17:41:51,713 | INFO     | update_server=False
[2026-03-03 09:42:45] 2026-03-03 17:41:51,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 09:42:45] 2026-03-03 17:41:51,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 09:42:45] 2026-03-03 17:41:51,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 09:42:45] 2026-03-03 17:41:52,016 | INFO     | all job control threads have been joined
[2026-03-03 09:42:45] 2026-03-03 17:41:52,050 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 09:42:45] 2026-03-03 17:41:52,050 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 09:42:45] 2026-03-03 17:41:52,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 09:42:45] 2026-03-03 17:41:52,050 | INFO     | will abort loop
[2026-03-03 09:42:45] 2026-03-03 17:41:52,216 | INFO     | all payload control threads have been joined
[2026-03-03 09:42:45] 2026-03-03 17:41:52,266 | INFO     | all data control threads have been joined
[2026-03-03 09:42:45] 2026-03-03 17:41:52,718 | INFO     | [job] retrieve thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:52,719 | INFO     | [job] queue monitor thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:52,942 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,022 | INFO     | [job] control thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,055 | INFO     | [job] job monitor thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,220 | INFO     | [payload] control thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,271 | INFO     | [data] control thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,310 | INFO     | [payload] validate_post thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,536 | INFO     | [payload] failed_post thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,588 | INFO     | [data] copytool_in thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,718 | INFO     | [data] copytool_out thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,847 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:53,847 | INFO     | [job] validate thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:54,032 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:41:54,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 09:42:45] 2026-03-03 17:41:58,299 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:42:02,743 | INFO     | job.realtimelogging is not enabled
[2026-03-03 09:42:45] 2026-03-03 17:42:03,749 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 09:42:45] 2026-03-03 17:42:22,026 | INFO     | PID=1636697 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 09:42:45] 2026-03-03 17:42:22,026 | INFO     | .. there are 2 such processes running
[2026-03-03 09:42:45] 2026-03-03 17:42:22,026 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 09:42:45] 2026-03-03 17:42:22,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 09:42:45] 2026-03-03 17:42:22,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 09:42:45] 2026-03-03 17:42:39,318 | INFO     | [monitor] cgroup control has ended
[2026-03-03 09:42:45] 2026-03-03 17:42:40,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138674104719168)>', '<ExcThread(monitor, started 138673767020288)>']
[2026-03-03 09:42:45] 2026-03-03 17:42:41,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 09:42:45] 2026-03-03 17:42:41,076 | INFO     | [monitor] control thread has ended
[2026-03-03 09:42:45] 2026-03-03 17:42:45,578 | INFO     | all workflow threads have been joined
[2026-03-03 09:42:45] 2026-03-03 17:42:45,578 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 09:42:45] 2026-03-03 17:42:45,579 | INFO     | traces error code: 0
[2026-03-03 09:42:45] 2026-03-03 17:42:45,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 09:42:45] 2026-03-03 17:42:45,670 [wrapper] ==== pilot stdout END ====
[2026-03-03 09:42:45] 2026-03-03 17:42:45,672 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 09:42:45] 2026-03-03 17:42:45,674 [wrapper] pilotpid: 1636697
[2026-03-03 09:42:45] 2026-03-03 17:42:45,676 [wrapper] Pilot exit status: 0
[2026-03-03 09:42:45] 2026-03-03 17:42:45,684 [wrapper] pandaids: 7036133855
[2026-03-03 09:42:45] 2026-03-03 17:42:45,704 [wrapper] cleanup supervisor_pilot 1659047 1636698
[2026-03-03 09:42:45] 2026-03-03 17:42:45,706 [wrapper] Test setup, not cleaning
[2026-03-03 09:42:45] 2026-03-03 17:42:45,708 [wrapper] apfmon messages muted
[2026-03-03 09:42:45] 2026-03-03 17:42:45,709 [wrapper] ==== wrapper stdout END ====
[2026-03-03 09:42:45] 2026-03-03 17:42:45,711 [wrapper] ==== wrapper stderr END ====
[2026-03-03 09:42:45]  *** Error codes and diagnostics ***
[2026-03-03 09:42:45]     "exeErrorCode": 0,
[2026-03-03 09:42:45]     "exeErrorDiag": "",
[2026-03-03 09:42:45]     "pilotErrorCode": 0,
[2026-03-03 09:42:45]     "pilotErrorDiag": "",
[2026-03-03 09:42:45]  *** Listing of results directory ***
[2026-03-03 09:42:45] total 504308
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc    584627 Mar  2 14:33 pilot3.tar.gz
[2026-03-03 09:42:45] -rwx------ 1 boinc boinc     36322 Mar  2 14:36 runpilot2-wrapper.sh
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc      5111 Mar  2 14:38 queuedata.json
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc       100 Mar  3 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 09:42:45] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 09:04 run_atlas
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc       105 Mar  3 09:04 job.xml
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc      6532 Mar  3 09:04 init_data.xml
[2026-03-03 09:42:45] -rw-r--r-- 2 boinc boinc 288001846 Mar  3 09:04 EVNT.48220205._000173.pool.root.1
[2026-03-03 09:42:45] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:04 start_atlas.sh
[2026-03-03 09:42:45] drwxrwx--x 2 boinc boinc      4096 Mar  3 09:04 shared
[2026-03-03 09:42:45] -rw-r--r-- 2 boinc boinc    597961 Mar  3 09:04 input.tar.gz
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc         0 Mar  3 09:04 boinc_lockfile
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc      2588 Mar  3 09:04 pandaJob.out
[2026-03-03 09:42:45] -rw------- 1 boinc boinc    998516 Mar  3 09:04 agis_schedconf.cvmfs.json
[2026-03-03 09:42:45] -rw------- 1 boinc boinc   1516092 Mar  3 09:04 agis_ddmendpoints.agis.ALL.json
[2026-03-03 09:42:45] -rw------- 1 boinc boinc       431 Mar  3 09:04 workernode_map.json
[2026-03-03 09:42:45] drwx------ 5 boinc boinc      4096 Mar  3 09:04 pilot3
[2026-03-03 09:42:45] -rw------- 1 boinc boinc 223041493 Mar  3 09:41 HITS.48838581._004171.pool.root.1
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc       529 Mar  3 09:41 boinc_task_state.xml
[2026-03-03 09:42:45] -rw------- 1 boinc boinc      1026 Mar  3 09:41 memory_monitor_summary.json
[2026-03-03 09:42:45] -rw------- 1 boinc boinc        95 Mar  3 09:41 pilot_heartbeat.json
[2026-03-03 09:42:45] -rw------- 1 boinc boinc    354287 Mar  3 09:41 log.48838581._004171.job.log.tgz.1
[2026-03-03 09:42:45] -rw------- 1 boinc boinc      6332 Mar  3 09:41 heartbeat.json
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc        27 Mar  3 09:42 wrapper_checkpoint.txt
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc      8192 Mar  3 09:42 boinc_mmap_file
[2026-03-03 09:42:45] -rw------- 1 boinc boinc      5148 Mar  3 09:42 pilotlog.txt
[2026-03-03 09:42:45] -rw------- 1 boinc boinc    365744 Mar  3 09:42 log.48838581._004171.job.log.1
[2026-03-03 09:42:45] -rw------- 1 boinc boinc       357 Mar  3 09:42 output.list
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc       620 Mar  3 09:42 runtime_log
[2026-03-03 09:42:45] -rw------- 1 boinc boinc    737280 Mar  3 09:42 result.tar.gz
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc      8862 Mar  3 09:42 runtime_log.err
[2026-03-03 09:42:45] -rw------- 1 boinc boinc       635 Mar  3 09:42 giNMDmO3QH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqvELDmWZDcxm.diag
[2026-03-03 09:42:45] -rw-r--r-- 1 boinc boinc     21459 Mar  3 09:42 stderr.txt
[2026-03-03 09:42:45] HITS file was successfully produced:
[2026-03-03 09:42:45] -rw------- 1 boinc boinc 223041493 Mar  3 09:41 shared/HITS.pool.root.1
[2026-03-03 09:42:45]  *** Contents of shared directory: ***
[2026-03-03 09:42:45] total 500392
[2026-03-03 09:42:45] -rw-r--r-- 2 boinc boinc 288001846 Mar  3 09:04 ATLAS.root_0
[2026-03-03 09:42:45] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:04 start_atlas.sh
[2026-03-03 09:42:45] -rw-r--r-- 2 boinc boinc    597961 Mar  3 09:04 input.tar.gz
[2026-03-03 09:42:45] -rw------- 1 boinc boinc 223041493 Mar  3 09:41 HITS.pool.root.1
[2026-03-03 09:42:45] -rw------- 1 boinc boinc    737280 Mar  3 09:42 result.tar.gz
09:42:46 (1632546): run_atlas exited; CPU time 24081.223195
09:42:46 (1632546): called boinc_finish(0)

</stderr_txt>
]]>

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