Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:41:42 (3902231): wrapper (7.7.26015): starting
15:41:42 (3902231): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 15:41:42] Arguments: --nthreads 4
[2026-03-04 15:41:42] Threads: 4
[2026-03-04 15:41:42] Checking for CVMFS
[2026-03-04 15:41:42] No cvmfs_config command found, will try listing directly
[2026-03-04 15:41:42] CVMFS is ok
[2026-03-04 15:41:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 15:41:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 15:41:42] Further information can be found at the LHC@home message board.
[2026-03-04 15:41:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 15:41:42] Checking for apptainer binary...
[2026-03-04 15:41:42] which: no apptainer in ((null))
[2026-03-04 15:41:42] apptainer is not installed, using version from CVMFS
[2026-03-04 15:41:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 15:41:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-04 15:41:42] apptainer works
[2026-03-04 15:41:42] Set ATHENA_PROC_NUMBER=4
[2026-03-04 15:41:42] Set ATHENA_CORE_NUMBER=4
[2026-03-04 15:41:42] Starting ATLAS job with PandaID=7036124962
[2026-03-04 15:41:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 18:30:17]  *** The last 200 lines of the pilot log: ***
[2026-03-04 18:30:17] 2026-03-04 17:29:11,932 | INFO     | total number of processed events: 400 (read)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,959 | INFO     | using path: /var/lib/boinc/var/slot72/slots/3/PanDA_Pilot-7036124962/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,960 | INFO     | extracted standard info from prmon json
[2026-03-04 18:30:17] 2026-03-04 17:29:11,960 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 18:30:17] 2026-03-04 17:29:11,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 18:30:17] 2026-03-04 17:29:11,960 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 18:30:17] 2026-03-04 17:29:11,960 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 18:30:17] 2026-03-04 17:29:11,962 | INFO     | fitting pss+swap vs Time
[2026-03-04 18:30:17] 2026-03-04 17:29:11,962 | INFO     | sum of square deviations: 1392881930.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,963 | INFO     | sum of deviations: 9787331782.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,963 | INFO     | mean x: 1772640337.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,963 | INFO     | mean y: 2315889.018181818
[2026-03-04 18:30:17] 2026-03-04 17:29:11,963 | INFO     | intersect: -12453455655.361958
[2026-03-04 18:30:17] 2026-03-04 17:29:11,963 | INFO     | chi2: 1.9313441602507035
[2026-03-04 18:30:17] 2026-03-04 17:29:11,963 | INFO     | sum of square deviations: 1270051720.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,964 | INFO     | sum of deviations: 19785862583.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,964 | INFO     | mean x: 1772640184.5
[2026-03-04 18:30:17] 2026-03-04 17:29:11,964 | INFO     | mean y: 2327981.2
[2026-03-04 18:30:17] 2026-03-04 17:29:11,964 | INFO     | intersect: -27613252193.456795
[2026-03-04 18:30:17] 2026-03-04 17:29:11,964 | INFO     | chi2: 1.106324664318396
[2026-03-04 18:30:17] 2026-03-04 17:29:11,964 | INFO     | current chi2=1.106324664318396 (change=42.71737336680655 %)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,964 | INFO     | sum of square deviations: 1154663510.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | sum of deviations: 19056129221.000004
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | mean x: 1772640032.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | mean y: 2327016.477419355
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | intersect: -29252652654.70798
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | chi2: 1.1069569062635691
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | current chi2=1.1069569062635691 (change=-0.05714795715620406 %)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | right removable region: 154
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | sum of square deviations: 1270051720.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | sum of deviations: -6613267755.5
[2026-03-04 18:30:17] 2026-03-04 17:29:11,965 | INFO     | mean x: 1772640489.5
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | mean y: 2335871.58125
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | intersect: 9232626265.821325
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | chi2: 0.8474288312229064
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | current chi2=0.8474288312229064 (change=56.12232927388232 %)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | sum of square deviations: 1154663510.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | sum of deviations: -7471911777.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | mean x: 1772640642.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | mean y: 2337003.664516129
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | intersect: 11473223867.793999
[2026-03-04 18:30:17] 2026-03-04 17:29:11,966 | INFO     | chi2: 0.8465576219061007
[2026-03-04 18:30:17] 2026-03-04 17:29:11,967 | INFO     | current chi2=0.8465576219061007 (change=0.10280619265082092 %)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,967 | INFO     | left removable region: 20
[2026-03-04 18:30:17] 2026-03-04 17:29:11,967 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 18:30:17] 2026-03-04 17:29:11,974 | INFO     | sum of deviations: 1287563112.0
[2026-03-04 18:30:17] 2026-03-04 17:29:11,974 | INFO     | mean x: 1772640611.5
[2026-03-04 18:30:17] 2026-03-04 17:29:11,974 | INFO     | mean y: 2351892.149253731
[2026-03-04 18:30:17] 2026-03-04 17:29:11,974 | INFO     | intersect: -3056937697.9603086
[2026-03-04 18:30:17] 2026-03-04 17:29:11,974 | INFO     | chi2: 5.654798715887009e-05
[2026-03-04 18:30:17] 2026-03-04 17:29:11,974 | INFO     | current memory leak: 1.73 B/s (using 134 data points, chi2=0.00)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | could have reported an average CPU frequency of 3658 MHz (9 samples)
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | ..............................
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . Timing measurements:
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . get job = 0 s
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . initial setup = 4 s
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . payload setup = 5 s
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . stage-in = 0 s
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . payload execution = 10015 s
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . stage-out = 0 s
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | . log creation = 0 s
[2026-03-04 18:30:17] 2026-03-04 17:29:11,975 | INFO     | ..............................
[2026-03-04 18:30:17] 2026-03-04 17:29:12,034 | INFO     | 
[2026-03-04 18:30:17] 2026-03-04 17:29:12,034 | INFO     | job summary report
[2026-03-04 18:30:17] 2026-03-04 17:29:12,034 | INFO     | --------------------------------------------------
[2026-03-04 18:30:17] 2026-03-04 17:29:12,034 | INFO     | PanDA job id: 7036124962
[2026-03-04 18:30:17] 2026-03-04 17:29:12,034 | INFO     | task id: 48849014
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | errors: (none)
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | pilot state: finished 
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | transexitcode: 0
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | exeerrorcode: 0
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | exeerrordiag: 
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | exitcode: 0
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | exitmsg: OK
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | cpuconsumptiontime: 36252 s
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | nevents: 400
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | neventsw: 0
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | pid: 3913058
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | pgrp: 3913058
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | corecount: 4
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | event service: False
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | sizes: {0: 2286881, 1: 2287171, 11: 2287171, 10024: 2316263, 10025: 2325283, 10027: 2325725}
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | --------------------------------------------------
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | 
[2026-03-04 18:30:17] 2026-03-04 17:29:12,035 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/3
[2026-03-04 18:30:17] 2026-03-04 17:29:12,084 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | job 7036124962 has completed (purged errors)
[2026-03-04 18:30:17] 2026-03-04 17:29:12,085 | INFO     | overall cleanup function is called
[2026-03-04 18:30:17] 2026-03-04 17:29:13,092 | INFO     | --- collectZombieJob: --- 10, [3913058]
[2026-03-04 18:30:17] 2026-03-04 17:29:13,092 | INFO     | zombie collector waiting for pid 3913058
[2026-03-04 18:30:17] 2026-03-04 17:29:13,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 18:30:17] 2026-03-04 17:29:13,092 | INFO     | collected zombie processes
[2026-03-04 18:30:17] 2026-03-04 17:29:13,092 | INFO     | will attempt to kill all subprocesses of pid=3913058
[2026-03-04 18:30:17] 2026-03-04 17:29:13,665 | INFO     | process IDs to be killed: [3913058] (in reverse order)
[2026-03-04 18:30:17] 2026-03-04 17:29:13,940 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 18:30:17] 2026-03-04 17:29:13,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 18:30:17] 2026-03-04 17:29:13,976 | INFO     | did not find any defunct processes belonging to 3913058
[2026-03-04 18:30:17] 2026-03-04 17:29:14,006 | INFO     | did not find any defunct processes belonging to 3913058
[2026-03-04 18:30:17] 2026-03-04 17:29:14,007 | INFO     | ready for new job
[2026-03-04 18:30:17] 2026-03-04 17:29:14,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 18:30:17] 2026-03-04 17:29:14,008 | INFO     | **************************************
[2026-03-04 18:30:17] 2026-03-04 17:29:14,008 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 18:30:17] 2026-03-04 17:29:14,008 | INFO     | **************************************
[2026-03-04 18:30:17] 2026-03-04 17:29:14,008 | INFO     | 
[2026-03-04 18:30:17] 2026-03-04 17:29:14,014 | INFO     | architecture information:
[2026-03-04 18:30:17] 2026-03-04 17:29:14,015 | INFO     | executing command: cat /etc/os-release
[2026-03-04 18:30:17] 2026-03-04 17:29:14,055 | INFO     | cat /etc/os-release:
[2026-03-04 18:30:17] NAME="CentOS Linux"
[2026-03-04 18:30:17] VERSION="7 (Core)"
[2026-03-04 18:30:17] ID="centos"
[2026-03-04 18:30:17] ID_LIKE="rhel fedora"
[2026-03-04 18:30:17] VERSION_ID="7"
[2026-03-04 18:30:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 18:30:17] ANSI_COLOR="0;31"
[2026-03-04 18:30:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 18:30:17] HOME_URL="https://www.centos.org/"
[2026-03-04 18:30:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 18:30:17] 
[2026-03-04 18:30:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 18:30:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 18:30:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 18:30:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 18:30:17] 
[2026-03-04 18:30:17] 2026-03-04 17:29:14,055 | INFO     | **************************************
[2026-03-04 18:30:17] 2026-03-04 17:29:14,559 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/3
[2026-03-04 18:30:17] 2026-03-04 17:29:14,601 | INFO     | sufficient remaining disk space (20620247040 B)
[2026-03-04 18:30:17] 2026-03-04 17:29:14,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 18:30:17] 2026-03-04 17:29:14,602 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 18:30:17] 2026-03-04 17:29:14,602 | INFO     | update_server=False
[2026-03-04 18:30:17] 2026-03-04 17:29:14,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 18:30:17] 2026-03-04 17:29:14,669 | INFO     | all data control threads have been joined
[2026-03-04 18:30:17] 2026-03-04 17:29:14,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 18:30:17] 2026-03-04 17:29:14,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 18:30:17] 2026-03-04 17:29:14,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 18:30:17] 2026-03-04 17:29:14,840 | INFO     | will abort loop
[2026-03-04 18:30:17] 2026-03-04 17:29:15,479 | INFO     | all job control threads have been joined
[2026-03-04 18:30:17] 2026-03-04 17:29:15,607 | INFO     | [job] retrieve thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:15,674 | INFO     | [data] control thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:15,674 | INFO     | all payload control threads have been joined
[2026-03-04 18:30:17] 2026-03-04 17:29:15,845 | INFO     | [job] job monitor thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,013 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 18:30:17] 2026-03-04 17:29:16,217 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,320 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,484 | INFO     | [job] control thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,547 | INFO     | [job] validate thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,601 | INFO     | [payload] failed_post thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,614 | INFO     | [data] copytool_in thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,679 | INFO     | [payload] control thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:16,736 | INFO     | [payload] validate_post thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:17,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 18:30:17] 2026-03-04 17:29:17,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 18:30:17] 2026-03-04 17:29:18,051 | INFO     | [job] queue monitor thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:18,086 | INFO     | [data] copytool_out thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:21,939 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:25,420 | INFO     | job.realtimelogging is not enabled
[2026-03-04 18:30:17] 2026-03-04 17:29:26,425 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 18:30:17] 2026-03-04 17:29:45,322 | INFO     | PID=3906890 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 18:30:17] 2026-03-04 17:29:45,323 | INFO     | .. there are 56 such processes running
[2026-03-04 18:30:17] 2026-03-04 17:29:45,323 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 18:30:17] 2026-03-04 17:29:45,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 18:30:17] 2026-03-04 17:29:45,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 18:30:17] 2026-03-04 17:30:10,914 | INFO     | [monitor] cgroup control has ended
[2026-03-04 18:30:17] 2026-03-04 17:30:11,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23029851686720)>', '<ExcThread(monitor, started 23029545428736)>']
[2026-03-04 18:30:17] 2026-03-04 17:30:12,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 18:30:17] 2026-03-04 17:30:12,468 | INFO     | [monitor] control thread has ended
[2026-03-04 18:30:17] 2026-03-04 17:30:16,751 | INFO     | all workflow threads have been joined
[2026-03-04 18:30:17] 2026-03-04 17:30:16,751 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 18:30:17] 2026-03-04 17:30:16,751 | INFO     | traces error code: 0
[2026-03-04 18:30:17] 2026-03-04 17:30:16,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 18:30:17] 2026-03-04 17:30:16,898 [wrapper] ==== pilot stdout END ====
[2026-03-04 18:30:17] 2026-03-04 17:30:16,926 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 18:30:17] 2026-03-04 17:30:16,933 [wrapper] pilotpid: 3906890
[2026-03-04 18:30:17] 2026-03-04 17:30:16,936 [wrapper] Pilot exit status: 0
[2026-03-04 18:30:17] 2026-03-04 17:30:17,031 [wrapper] pandaids: 7036124962
[2026-03-04 18:30:17] 2026-03-04 17:30:17,170 [wrapper] cleanup supervisor_pilot 1488556 3906891
[2026-03-04 18:30:17] 2026-03-04 17:30:17,173 [wrapper] Test setup, not cleaning
[2026-03-04 18:30:17] 2026-03-04 17:30:17,176 [wrapper] apfmon messages muted
[2026-03-04 18:30:17] 2026-03-04 17:30:17,201 [wrapper] ==== wrapper stdout END ====
[2026-03-04 18:30:17] 2026-03-04 17:30:17,225 [wrapper] ==== wrapper stderr END ====
[2026-03-04 18:30:17]  *** Error codes and diagnostics ***
[2026-03-04 18:30:17]     "exeErrorCode": 0,
[2026-03-04 18:30:17]     "exeErrorDiag": "",
[2026-03-04 18:30:17]     "pilotErrorCode": 0,
[2026-03-04 18:30:17]     "pilotErrorDiag": "",
[2026-03-04 18:30:17]  *** Listing of results directory ***
[2026-03-04 18:30:17] total 476220
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc    584627 Mar  2 21:01 pilot3.tar.gz
[2026-03-04 18:30:17] -rwx------. 1 boinc boinc     36322 Mar  2 21:02 runpilot2-wrapper.sh
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc      5111 Mar  2 21:03 queuedata.json
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc       100 Mar  4 15:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 18:30:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 15:41 run_atlas
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc       105 Mar  4 15:41 job.xml
[2026-03-04 18:30:17] -rw-r--r--. 2 boinc boinc 260727702 Mar  4 15:41 EVNT.48456453._000001.pool.root.1
[2026-03-04 18:30:17] -rw-r--r--. 2 boinc boinc     15845 Mar  4 15:41 start_atlas.sh
[2026-03-04 18:30:17] drwxrwx--x. 2 boinc boinc      4096 Mar  4 15:41 shared
[2026-03-04 18:30:17] -rw-r--r--. 2 boinc boinc    597957 Mar  4 15:41 input.tar.gz
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc      6703 Mar  4 15:41 init_data.xml
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc         0 Mar  4 15:41 boinc_lockfile
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc      2608 Mar  4 15:41 pandaJob.out
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc    997352 Mar  4 15:41 agis_schedconf.cvmfs.json
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc   1516092 Mar  4 15:41 agis_ddmendpoints.agis.ALL.json
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc       444 Mar  4 15:41 workernode_map.json
[2026-03-04 18:30:17] drwx------. 5 boinc boinc      4096 Mar  4 15:41 pilot3
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc 219464728 Mar  4 18:28 HITS.48849014._000025.pool.root.1
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc       529 Mar  4 18:28 boinc_task_state.xml
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc        95 Mar  4 18:28 pilot_heartbeat.json
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc      1032 Mar  4 18:29 memory_monitor_summary.json
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc    357603 Mar  4 18:29 log.48849014._000025.job.log.tgz.1
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc      6347 Mar  4 18:29 heartbeat.json
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc        27 Mar  4 18:30 wrapper_checkpoint.txt
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc      5087 Mar  4 18:30 pilotlog.txt
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc      8192 Mar  4 18:30 boinc_mmap_file
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc   1403856 Mar  4 18:30 log.48849014._000025.job.log.1
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc       357 Mar  4 18:30 output.list
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc       620 Mar  4 18:30 runtime_log
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc   1781760 Mar  4 18:30 result.tar.gz
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc       663 Mar  4 18:30 v5SMDmdeOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmEpCLDmJtz4wm.diag
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc      9205 Mar  4 18:30 runtime_log.err
[2026-03-04 18:30:17] -rw-r--r--. 1 boinc boinc     20784 Mar  4 18:30 stderr.txt
[2026-03-04 18:30:17] HITS file was successfully produced:
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc 219464728 Mar  4 18:28 shared/HITS.pool.root.1
[2026-03-04 18:30:17]  *** Contents of shared directory: ***
[2026-03-04 18:30:17] total 471288
[2026-03-04 18:30:17] -rw-r--r--. 2 boinc boinc 260727702 Mar  4 15:41 ATLAS.root_0
[2026-03-04 18:30:17] -rw-r--r--. 2 boinc boinc     15845 Mar  4 15:41 start_atlas.sh
[2026-03-04 18:30:17] -rw-r--r--. 2 boinc boinc    597957 Mar  4 15:41 input.tar.gz
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc 219464728 Mar  4 18:28 HITS.pool.root.1
[2026-03-04 18:30:17] -rw-------. 1 boinc boinc   1781760 Mar  4 18:30 result.tar.gz
18:30:19 (3902231): run_atlas exited; CPU time 36721.822085
18:30:19 (3902231): called boinc_finish(0)

</stderr_txt>
]]>

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