Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:17:51 (2258280): wrapper (7.7.26015): starting
13:17:51 (2258280): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 13:17:51] Arguments: --nthreads 4
[2026-03-03 13:17:51] Threads: 4
[2026-03-03 13:17:51] Checking for CVMFS
[2026-03-03 13:17:51] No cvmfs_config command found, will try listing directly
[2026-03-03 13:17:51] CVMFS is ok
[2026-03-03 13:17:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 13:17:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 13:17:51] Further information can be found at the LHC@home message board.
[2026-03-03 13:17:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 13:17:51] Checking for apptainer binary...
[2026-03-03 13:17:51] which: no apptainer in ((null))
[2026-03-03 13:17:51] apptainer is not installed, using version from CVMFS
[2026-03-03 13:17:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 13:17:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-03 13:17:52] apptainer works
[2026-03-03 13:17:52] Set ATHENA_PROC_NUMBER=4
[2026-03-03 13:17:52] Set ATHENA_CORE_NUMBER=4
[2026-03-03 13:17:52] Starting ATLAS job with PandaID=7036113868
[2026-03-03 13:17:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 20:20:10]  *** The last 200 lines of the pilot log: ***
[2026-03-03 20:20:10] 2026-03-03 19:13:18,241 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot60/slots/0/workernode_map.json
[2026-03-03 20:20:10] 2026-03-03 19:13:18,241 | INFO     | this job has now completed (state=finished)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,241 | INFO     | log transfer has been attempted: DONE
[2026-03-03 20:20:10] 2026-03-03 19:13:18,242 | INFO     | job 7036113868 has finished - writing final server update
[2026-03-03 20:20:10] 2026-03-03 19:13:18,242 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_609392/.job.ad'
[2026-03-03 20:20:10] 2026-03-03 19:13:18,242 | INFO     | total number of processed events: 400 (read)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,276 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7036113868/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,277 | INFO     | extracted standard info from prmon json
[2026-03-03 20:20:10] 2026-03-03 19:13:18,277 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 20:20:10] 2026-03-03 19:13:18,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 20:20:10] 2026-03-03 19:13:18,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 20:20:10] 2026-03-03 19:13:18,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 20:20:10] 2026-03-03 19:13:18,285 | INFO     | fitting pss+swap vs Time
[2026-03-03 20:20:10] 2026-03-03 19:13:18,286 | INFO     | sum of square deviations: 21059899982.0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,290 | INFO     | sum of deviations: -45873223538.0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,290 | INFO     | mean x: 1772552739.5
[2026-03-03 20:20:10] 2026-03-03 19:13:18,290 | INFO     | mean y: 2351291.9607843137
[2026-03-03 20:20:10] 2026-03-03 19:13:18,290 | INFO     | intersect: 3863371910.362399
[2026-03-03 20:20:10] 2026-03-03 19:13:18,291 | INFO     | chi2: 1.4756036940980655
[2026-03-03 20:20:10] 2026-03-03 19:13:18,291 | INFO     | sum of square deviations: 20295085642.0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,296 | INFO     | sum of deviations: -45755095757.0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,296 | INFO     | mean x: 1772552587.0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,296 | INFO     | mean y: 2351315.8833746896
[2026-03-03 20:20:10] 2026-03-03 19:13:18,296 | INFO     | intersect: 3998555854.417693
[2026-03-03 20:20:10] 2026-03-03 19:13:18,297 | INFO     | chi2: 1.4742399376884079
[2026-03-03 20:20:10] 2026-03-03 19:13:18,297 | INFO     | current chi2=1.4742399376884079 (change=0.092420235535609 %)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,297 | INFO     | right removable region: 402
[2026-03-03 20:20:10] 2026-03-03 19:13:18,297 | INFO     | sum of square deviations: 20295085642.0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,301 | INFO     | sum of deviations: -84834877456.00002
[2026-03-03 20:20:10] 2026-03-03 19:13:18,301 | INFO     | mean x: 1772552892.0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,302 | INFO     | mean y: 2358986.6774193547
[2026-03-03 20:20:10] 2026-03-03 19:13:18,302 | INFO     | intersect: 7411754050.569333
[2026-03-03 20:20:10] 2026-03-03 19:13:18,302 | INFO     | chi2: 0.2872037554122539
[2026-03-03 20:20:10] 2026-03-03 19:13:18,302 | INFO     | current chi2=0.2872037554122539 (change=80.53652504659784 %)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,303 | INFO     | sum of square deviations: 19549015839.5
[2026-03-03 20:20:10] 2026-03-03 19:13:18,307 | INFO     | sum of deviations: -66331871225.000015
[2026-03-03 20:20:10] 2026-03-03 19:13:18,307 | INFO     | mean x: 1772553044.5
[2026-03-03 20:20:10] 2026-03-03 19:13:18,307 | INFO     | mean y: 2355200.5477386937
[2026-03-03 20:20:10] 2026-03-03 19:13:18,307 | INFO     | intersect: 6016814509.015053
[2026-03-03 20:20:10] 2026-03-03 19:13:18,308 | INFO     | chi2: 0.22904136551023918
[2026-03-03 20:20:10] 2026-03-03 19:13:18,308 | INFO     | current chi2=0.22904136551023918 (change=20.251263712944176 %)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,308 | INFO     | left removable region: 20
[2026-03-03 20:20:10] 2026-03-03 19:13:18,309 | INFO     | sum of square deviations: 17284846875.5
[2026-03-03 20:20:10] 2026-03-03 19:13:18,312 | INFO     | sum of deviations: -24817515567.499996
[2026-03-03 20:20:10] 2026-03-03 19:13:18,312 | INFO     | mean x: 1772553166.5
[2026-03-03 20:20:10] 2026-03-03 19:13:18,313 | INFO     | mean y: 2346307.0287958113
[2026-03-03 20:20:10] 2026-03-03 19:13:18,313 | INFO     | intersect: 2547371213.5663404
[2026-03-03 20:20:10] 2026-03-03 19:13:18,313 | INFO     | chi2: 0.048772063598639746
[2026-03-03 20:20:10] 2026-03-03 19:13:18,313 | INFO     | current memory leak: -1.44 B/s (using 382 data points, chi2=0.05)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | could have reported an average CPU frequency of 2733 MHz (17 samples)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | ..............................
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | . Timing measurements:
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | . get job = 0 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | . initial setup = 8 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | . payload setup = 9 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | . stage-in = 0 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,315 | INFO     | . payload execution = 24870 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,316 | INFO     | . stage-out = 1 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,316 | INFO     | . log creation = 0 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,316 | INFO     | ..............................
[2026-03-03 20:20:10] 2026-03-03 19:13:18,418 | INFO     | 
[2026-03-03 20:20:10] 2026-03-03 19:13:18,418 | INFO     | job summary report
[2026-03-03 20:20:10] 2026-03-03 19:13:18,418 | INFO     | --------------------------------------------------
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | PanDA job id: 7036113868
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | task id: 48847560
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | errors: (none)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | pilot state: finished 
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | transexitcode: 0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | exeerrorcode: 0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | exeerrordiag: 
[2026-03-03 20:20:10] 2026-03-03 19:13:18,419 | INFO     | exitcode: 0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | exitmsg: OK
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | cpuconsumptiontime: 97441 s
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | nevents: 400
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | neventsw: 0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | pid: 2267886
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | pgrp: 2267886
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | corecount: 4
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | event service: False
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | sizes: {0: 2287158, 11: 2287158, 24884: 2323729, 24886: 2332749, 24888: 2332805, 24890: 2333063}
[2026-03-03 20:20:10] 2026-03-03 19:13:18,420 | INFO     | --------------------------------------------------
[2026-03-03 20:20:10] 2026-03-03 19:13:18,421 | INFO     | 
[2026-03-03 20:20:10] 2026-03-03 19:13:18,421 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-03-03 20:20:10] 2026-03-03 19:13:18,451 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,451 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,453 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 20:20:10] 2026-03-03 19:13:18,454 | INFO     | job 7036113868 has completed (purged errors)
[2026-03-03 20:20:10] 2026-03-03 19:13:18,454 | INFO     | overall cleanup function is called
[2026-03-03 20:20:10] 2026-03-03 19:13:18,593 | INFO     | PID=2262766 has CPU usage=25.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 20:20:10] 2026-03-03 19:13:18,593 | INFO     | .. there are 18 such processes running
[2026-03-03 20:20:10] 2026-03-03 19:13:19,466 | INFO     | --- collectZombieJob: --- 10, [2267886]
[2026-03-03 20:20:10] 2026-03-03 19:13:19,466 | INFO     | zombie collector waiting for pid 2267886
[2026-03-03 20:20:10] 2026-03-03 19:13:19,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 20:20:10] 2026-03-03 19:13:19,466 | INFO     | collected zombie processes
[2026-03-03 20:20:10] 2026-03-03 19:13:19,466 | INFO     | will attempt to kill all subprocesses of pid=2267886
[2026-03-03 20:20:10] 2026-03-03 19:13:20,266 | INFO     | process IDs to be killed: [2267886] (in reverse order)
[2026-03-03 20:20:10] 2026-03-03 19:13:20,557 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 20:20:10] 2026-03-03 19:13:20,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 20:20:10] 2026-03-03 19:13:20,585 | INFO     | did not find any defunct processes belonging to 2267886
[2026-03-03 20:20:10] 2026-03-03 19:13:20,611 | INFO     | did not find any defunct processes belonging to 2267886
[2026-03-03 20:20:10] 2026-03-03 19:13:20,611 | INFO     | ready for new job
[2026-03-03 20:20:10] 2026-03-03 19:13:20,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 20:20:10] 2026-03-03 19:13:20,615 | INFO     | **************************************
[2026-03-03 20:20:10] 2026-03-03 19:13:20,615 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 20:20:10] 2026-03-03 19:13:20,615 | INFO     | **************************************
[2026-03-03 20:20:10] 2026-03-03 19:13:20,615 | INFO     | 
[2026-03-03 20:20:10] 2026-03-03 19:13:20,624 | INFO     | architecture information:
[2026-03-03 20:20:10] 2026-03-03 19:13:20,624 | INFO     | executing command: cat /etc/os-release
[2026-03-03 20:20:10] 2026-03-03 19:13:20,646 | INFO     | cat /etc/os-release:
[2026-03-03 20:20:10] NAME="CentOS Linux"
[2026-03-03 20:20:10] VERSION="7 (Core)"
[2026-03-03 20:20:10] ID="centos"
[2026-03-03 20:20:10] ID_LIKE="rhel fedora"
[2026-03-03 20:20:10] VERSION_ID="7"
[2026-03-03 20:20:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 20:20:10] ANSI_COLOR="0;31"
[2026-03-03 20:20:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 20:20:10] HOME_URL="https://www.centos.org/"
[2026-03-03 20:20:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 20:20:10] 
[2026-03-03 20:20:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 20:20:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 20:20:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 20:20:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 20:20:10] 
[2026-03-03 20:20:10] 2026-03-03 19:13:20,647 | INFO     | **************************************
[2026-03-03 20:20:10] 2026-03-03 19:13:21,150 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-03 20:20:10] 2026-03-03 19:13:21,173 | INFO     | sufficient remaining disk space (3319292493824 B)
[2026-03-03 20:20:10] 2026-03-03 19:13:21,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 20:20:10] 2026-03-03 19:13:21,173 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 20:20:10] 2026-03-03 19:13:21,173 | INFO     | update_server=False
[2026-03-03 20:20:10] 2026-03-03 19:13:21,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 20:20:10] 2026-03-03 19:13:21,241 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 20:20:10] 2026-03-03 19:13:21,241 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 20:20:10] 2026-03-03 19:13:21,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 20:20:10] 2026-03-03 19:13:21,241 | INFO     | will abort loop
[2026-03-03 20:20:10] 2026-03-03 19:13:21,286 | INFO     | all payload control threads have been joined
[2026-03-03 20:20:10] 2026-03-03 19:13:21,981 | INFO     | all data control threads have been joined
[2026-03-03 20:20:10] 2026-03-03 19:13:22,179 | INFO     | [job] retrieve thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,243 | INFO     | [job] job monitor thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,291 | INFO     | [payload] control thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,302 | INFO     | [data] copytool_in thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,308 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,397 | INFO     | [job] validate thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 20:20:10] 2026-03-03 19:13:22,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 20:20:10] 2026-03-03 19:13:22,746 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,838 | INFO     | all job control threads have been joined
[2026-03-03 20:20:10] 2026-03-03 19:13:22,868 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,983 | INFO     | [payload] validate_post thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:22,987 | INFO     | [data] control thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:23,227 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:23,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 20:20:10] 2026-03-03 19:13:23,660 | INFO     | [payload] failed_post thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:23,843 | INFO     | [job] control thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:24,433 | INFO     | [job] queue monitor thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:24,474 | INFO     | [data] copytool_out thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:26,415 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 20:20:10] 2026-03-03 19:13:51,626 | INFO     | PID=2262766 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 20:20:10] 2026-03-03 19:13:51,626 | INFO     | .. there are 17 such processes running
[2026-03-03 20:20:10] 2026-03-03 19:13:51,627 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 20:20:10] 2026-03-03 19:13:51,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 20:20:10] 2026-03-03 19:13:51,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 20:20:10] 2026-03-03 19:13:57,398 | INFO     | [monitor] cgroup control has ended
[2026-03-03 20:20:10] 2026-03-03 19:13:58,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23428796622656)>', '<ExcThread(monitor, started 23428559288064)>']
[2026-03-03 20:20:10] 2026-03-03 19:13:59,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 20:20:10] 2026-03-03 19:13:59,659 | INFO     | [monitor] control thread has ended
[2026-03-03 20:20:10] 2026-03-03 19:14:03,698 | INFO     | all workflow threads have been joined
[2026-03-03 20:20:10] 2026-03-03 19:14:03,699 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 20:20:10] 2026-03-03 19:14:03,699 | INFO     | traces error code: 0
[2026-03-03 20:20:10] 2026-03-03 19:14:03,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 20:20:10] 2026-03-03 19:14:03,875 [wrapper] ==== pilot stdout END ====
[2026-03-03 20:20:10] 2026-03-03 19:14:03,879 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 20:20:10] 2026-03-03 19:14:03,883 [wrapper] pilotpid: 2262766
[2026-03-03 20:20:10] 2026-03-03 19:14:03,887 [wrapper] Pilot exit status: 0
[2026-03-03 20:20:10] 2026-03-03 19:14:03,899 [wrapper] pandaids: 7036113868
[2026-03-03 20:20:10] 2026-03-03 19:14:04,084 [wrapper] cleanup supervisor_pilot 2758912 2262767
[2026-03-03 20:20:10] 2026-03-03 19:14:04,087 [wrapper] Test setup, not cleaning
[2026-03-03 20:20:10] 2026-03-03 19:14:04,092 [wrapper] apfmon messages muted
[2026-03-03 20:20:10] 2026-03-03 19:14:04,095 [wrapper] ==== wrapper stdout END ====
[2026-03-03 20:20:10] 2026-03-03 19:14:04,100 [wrapper] ==== wrapper stderr END ====
[2026-03-03 20:20:10]  *** Error codes and diagnostics ***
[2026-03-03 20:20:10]     "exeErrorCode": 0,
[2026-03-03 20:20:10]     "exeErrorDiag": "",
[2026-03-03 20:20:10]     "pilotErrorCode": 0,
[2026-03-03 20:20:10]     "pilotErrorDiag": "",
[2026-03-03 20:20:10]  *** Listing of results directory ***
[2026-03-03 20:20:10] total 470204
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc    584627 Mar  2 21:01 pilot3.tar.gz
[2026-03-03 20:20:10] -rwx------ 1 boinc boinc     36322 Mar  2 21:01 runpilot2-wrapper.sh
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc      5111 Mar  2 21:03 queuedata.json
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc       100 Mar  3 13:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 20:20:10] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 13:17 run_atlas
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc       105 Mar  3 13:17 job.xml
[2026-03-03 20:20:10] -rw-r--r-- 2 boinc boinc 242852771 Mar  3 13:17 EVNT.48453937._000001.pool.root.1
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc      6696 Mar  3 13:17 init_data.xml
[2026-03-03 20:20:10] -rw-r--r-- 2 boinc boinc     15845 Mar  3 13:17 start_atlas.sh
[2026-03-03 20:20:10] drwxrwx--x 2 boinc boinc      4096 Mar  3 13:17 shared
[2026-03-03 20:20:10] -rw-r--r-- 2 boinc boinc    597965 Mar  3 13:17 input.tar.gz
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc         0 Mar  3 13:17 boinc_lockfile
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc      2623 Mar  3 13:17 pandaJob.out
[2026-03-03 20:20:10] -rw------- 1 boinc boinc    998442 Mar  3 13:18 agis_schedconf.cvmfs.json
[2026-03-03 20:20:10] -rw------- 1 boinc boinc       443 Mar  3 13:18 workernode_map.json
[2026-03-03 20:20:10] drwx------ 5 boinc boinc      4096 Mar  3 13:18 pilot3
[2026-03-03 20:20:10] -rw------- 1 boinc boinc 226787568 Mar  3 20:12 HITS.48847560._000023.pool.root.1
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc       529 Mar  3 20:12 boinc_task_state.xml
[2026-03-03 20:20:10] -rw------- 1 boinc boinc      1028 Mar  3 20:13 memory_monitor_summary.json
[2026-03-03 20:20:10] -rw------- 1 boinc boinc   1516092 Mar  3 20:13 agis_ddmendpoints.agis.ALL.json
[2026-03-03 20:20:10] -rw------- 1 boinc boinc    557162 Mar  3 20:13 log.48847560._000023.job.log.tgz.1
[2026-03-03 20:20:10] -rw------- 1 boinc boinc      6341 Mar  3 20:13 heartbeat.json
[2026-03-03 20:20:10] -rw------- 1 boinc boinc        95 Mar  3 20:13 pilot_heartbeat.json
[2026-03-03 20:20:10] -rw------- 1 boinc boinc      5017 Mar  3 20:14 pilotlog.txt
[2026-03-03 20:20:10] -rw------- 1 boinc boinc   3399456 Mar  3 20:14 log.48847560._000023.job.log.1
[2026-03-03 20:20:10] -rw------- 1 boinc boinc       357 Mar  3 20:14 output.list
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc       620 Mar  3 20:14 runtime_log
[2026-03-03 20:20:10] -rw------- 1 boinc boinc   3973120 Mar  3 20:14 result.tar.gz
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc      9205 Mar  3 20:14 runtime_log.err
[2026-03-03 20:20:10] -rw------- 1 boinc boinc       667 Mar  3 20:14 6RvKDmgdOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvmCLDmpSPlQm.diag
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc        27 Mar  3 20:19 wrapper_checkpoint.txt
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc      8192 Mar  3 20:20 boinc_mmap_file
[2026-03-03 20:20:10] -rw-r--r-- 1 boinc boinc     21182 Mar  3 20:20 stderr.txt
[2026-03-03 20:20:10] HITS file was successfully produced:
[2026-03-03 20:20:10] -rw------- 1 boinc boinc 226787568 Mar  3 20:12 shared/HITS.pool.root.1
[2026-03-03 20:20:10]  *** Contents of shared directory: ***
[2026-03-03 20:20:10] total 463128
[2026-03-03 20:20:10] -rw-r--r-- 2 boinc boinc 242852771 Mar  3 13:17 ATLAS.root_0
[2026-03-03 20:20:10] -rw-r--r-- 2 boinc boinc     15845 Mar  3 13:17 start_atlas.sh
[2026-03-03 20:20:10] -rw-r--r-- 2 boinc boinc    597965 Mar  3 13:17 input.tar.gz
[2026-03-03 20:20:10] -rw------- 1 boinc boinc 226787568 Mar  3 20:12 HITS.pool.root.1
[2026-03-03 20:20:10] -rw------- 1 boinc boinc   3973120 Mar  3 20:14 result.tar.gz
20:20:11 (2258280): run_atlas exited; CPU time 99274.213477
20:20:11 (2258280): called boinc_finish(0)

</stderr_txt>
]]>

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