Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:32:57 (1815603): wrapper (7.7.26015): starting
21:32:57 (1815603): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 21:32:57] Arguments: --nthreads 8
[2026-03-02 21:32:57] Threads: 8
[2026-03-02 21:32:57] Checking for CVMFS
[2026-03-02 21:32:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 21:32:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 21:32:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 21:32:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 21:32:59] 2.13.3.0 12460 169134 514612 156828 3 416 26113744 32935936 54612 16776704 0 1671234249 99.664 1468571390 34652 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-02 21:32:59] CVMFS is ok
[2026-03-02 21:32:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 21:32:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 21:32:59] Further information can be found at the LHC@home message board.
[2026-03-02 21:32:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 21:32:59] Checking for apptainer binary...
[2026-03-02 21:32:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 21:32:59] Running /usr/bin/apptainer --version
[2026-03-02 21:32:59] apptainer version 1.4.5-2.el9
[2026-03-02 21:32:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 21:33:00] c7-6-31.aglt2.org
[2026-03-02 21:33:00] apptainer works
[2026-03-02 21:33:00] Set ATHENA_PROC_NUMBER=8
[2026-03-02 21:33:00] Set ATHENA_CORE_NUMBER=8
[2026-03-02 21:33:00] Starting ATLAS job with PandaID=7031090371
[2026-03-02 21:33:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:40:13 (1815603): BOINC client no longer exists - exiting
10:40:13 (1815603): timer handler: client dead, exiting
10:45:45 (3292438): wrapper (7.7.26015): starting
10:45:45 (3292438): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 10:45:45] Arguments: --nthreads 8
[2026-03-03 10:45:45] Threads: 8
[2026-03-03 10:45:45] This job has been restarted, cleaning up previous attempt
[2026-03-03 10:45:45] Checking for CVMFS
[2026-03-03 10:45:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 10:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 10:45:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 10:45:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 10:45:46] 2.13.3.0 12460 169927 521348 156849 0 546 27042494 32935936 47071 16776704 0 1680220906 99.665 1471855576 34637 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-03 10:45:46] CVMFS is ok
[2026-03-03 10:45:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 10:45:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 10:45:46] Further information can be found at the LHC@home message board.
[2026-03-03 10:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 10:45:46] Checking for apptainer binary...
[2026-03-03 10:45:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 10:45:46] Running /usr/bin/apptainer --version
[2026-03-03 10:45:46] apptainer version 1.4.5-2.el9
[2026-03-03 10:45:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 10:45:47] c7-6-31.aglt2.org
[2026-03-03 10:45:47] apptainer works
[2026-03-03 10:45:47] Set ATHENA_PROC_NUMBER=8
[2026-03-03 10:45:47] Set ATHENA_CORE_NUMBER=8
[2026-03-03 10:45:47] Starting ATLAS job with PandaID=7031090371
[2026-03-03 10:45:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 17:18:58]  *** The last 200 lines of the pilot log: ***
[2026-03-03 17:18:58] 2026-03-03 22:17:54,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 17:18:58] 2026-03-03 22:17:54,912 | INFO     | log transfer has been attempted: DONE
[2026-03-03 17:18:58] 2026-03-03 22:17:54,912 | INFO     | job 7031090371 has finished - writing final server update
[2026-03-03 17:18:58] 2026-03-03 22:17:54,913 | INFO     | total number of processed events: 400 (read)
[2026-03-03 17:18:58] 2026-03-03 22:17:54,940 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7031090371/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 17:18:58] 2026-03-03 22:17:54,944 | INFO     | extracted standard info from prmon json
[2026-03-03 17:18:58] 2026-03-03 22:17:54,944 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 17:18:58] 2026-03-03 22:17:54,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 17:18:58] 2026-03-03 22:17:54,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 17:18:58] 2026-03-03 22:17:54,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 17:18:58] 2026-03-03 22:17:54,954 | INFO     | fitting pss+swap vs Time
[2026-03-03 17:18:58] 2026-03-03 22:17:54,954 | INFO     | sum of square deviations: 17557806723.87241
[2026-03-03 17:18:58] 2026-03-03 22:17:54,961 | INFO     | sum of deviations: 107343577127.7056
[2026-03-03 17:18:58] 2026-03-03 22:17:54,962 | INFO     | mean x: 1772564530.5182292
[2026-03-03 17:18:58] 2026-03-03 22:17:54,962 | INFO     | mean y: 2523925.6848958335
[2026-03-03 17:18:58] 2026-03-03 22:17:54,962 | INFO     | intersect: -10834445656.444872
[2026-03-03 17:18:58] 2026-03-03 22:17:54,962 | INFO     | chi2: 2.2097609889769174
[2026-03-03 17:18:58] 2026-03-03 22:17:54,962 | INFO     | sum of square deviations: 16880824025.904999
[2026-03-03 17:18:58] 2026-03-03 22:17:54,970 | INFO     | sum of deviations: 105567571927.32709
[2026-03-03 17:18:58] 2026-03-03 22:17:54,970 | INFO     | mean x: 1772564378.0158312
[2026-03-03 17:18:58] 2026-03-03 22:17:54,970 | INFO     | mean y: 2523525.612137203
[2026-03-03 17:18:58] 2026-03-03 22:17:54,970 | INFO     | intersect: -11082558410.248638
[2026-03-03 17:18:58] 2026-03-03 22:17:54,971 | INFO     | chi2: 2.210201503253149
[2026-03-03 17:18:58] 2026-03-03 22:17:54,971 | INFO     | current chi2=2.210201503253149 (change=-0.01993492863839301 %)
[2026-03-03 17:18:58] 2026-03-03 22:17:54,971 | INFO     | right removable region: 378
[2026-03-03 17:18:58] 2026-03-03 22:17:54,971 | INFO     | sum of square deviations: 16880843058.87073
[2026-03-03 17:18:58] 2026-03-03 22:17:54,978 | INFO     | sum of deviations: 21809531001.92614
[2026-03-03 17:18:58] 2026-03-03 22:17:54,978 | INFO     | mean x: 1772564683.0184696
[2026-03-03 17:18:58] 2026-03-03 22:17:54,978 | INFO     | mean y: 2543123.0105540897
[2026-03-03 17:18:58] 2026-03-03 22:17:54,978 | INFO     | intersect: -2287556030.9470344
[2026-03-03 17:18:58] 2026-03-03 22:17:54,979 | INFO     | chi2: 0.06321085956542596
[2026-03-03 17:18:58] 2026-03-03 22:17:54,979 | INFO     | current chi2=0.06321085956542596 (change=97.13947074454003 %)
[2026-03-03 17:18:58] 2026-03-03 22:17:54,979 | INFO     | sum of square deviations: 16221507631.369036
[2026-03-03 17:18:58] 2026-03-03 22:17:54,986 | INFO     | sum of deviations: 8513662469.497321
[2026-03-03 17:18:58] 2026-03-03 22:17:54,986 | INFO     | mean x: 1772564835.5187166
[2026-03-03 17:18:58] 2026-03-03 22:17:54,986 | INFO     | mean y: 2546185.2860962567
[2026-03-03 17:18:58] 2026-03-03 22:17:54,986 | INFO     | intersect: -927763071.8956151
[2026-03-03 17:18:58] 2026-03-03 22:17:54,986 | INFO     | chi2: 0.009556962780081777
[2026-03-03 17:18:58] 2026-03-03 22:17:54,987 | INFO     | current chi2=0.009556962780081777 (change=84.88082135603628 %)
[2026-03-03 17:18:58] 2026-03-03 22:17:54,987 | INFO     | sum of square deviations: 15579567878.86718
[2026-03-03 17:18:58] 2026-03-03 22:17:54,994 | INFO     | sum of deviations: 8419561681.132791
[2026-03-03 17:18:58] 2026-03-03 22:17:54,994 | INFO     | mean x: 1772564988.0189703
[2026-03-03 17:18:58] 2026-03-03 22:17:54,994 | INFO     | mean y: 2546205.9810298104
[2026-03-03 17:18:58] 2026-03-03 22:17:54,994 | INFO     | intersect: -955389236.5472577
[2026-03-03 17:18:58] 2026-03-03 22:17:54,994 | INFO     | chi2: 0.009337903038691989
[2026-03-03 17:18:58] 2026-03-03 22:17:54,995 | INFO     | current chi2=0.009337903038691989 (change=2.2921481063664273 %)
[2026-03-03 17:18:58] 2026-03-03 22:17:54,995 | INFO     | left removable region: 30
[2026-03-03 17:18:58] 2026-03-03 22:17:54,995 | INFO     | sum of square deviations: 13068116808.896576
[2026-03-03 17:18:58] 2026-03-03 22:17:55,002 | INFO     | sum of deviations: 15052288308.758623
[2026-03-03 17:18:58] 2026-03-03 22:17:55,002 | INFO     | mean x: 1772565262.5172415
[2026-03-03 17:18:58] 2026-03-03 22:17:55,002 | INFO     | mean y: 2544204.6235632184
[2026-03-03 17:18:58] 2026-03-03 22:17:55,002 | INFO     | intersect: -2039154975.7308547
[2026-03-03 17:18:58] 2026-03-03 22:17:55,006 | INFO     | chi2: 0.002585044852594589
[2026-03-03 17:18:58] 2026-03-03 22:17:55,006 | INFO     | current memory leak: 1.15 B/s (using 348 data points, chi2=0.00)
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | could have reported an average CPU frequency of 3473 MHz (16 samples)
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | ..............................
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | . Timing measurements:
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | . get job = 0 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | . initial setup = 4 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | . payload setup = 26 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | . stage-in = 0 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,007 | INFO     | . payload execution = 23442 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,008 | INFO     | . stage-out = 3 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,008 | INFO     | . log creation = 0 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,008 | INFO     | ..............................
[2026-03-03 17:18:58] 2026-03-03 22:17:55,388 | INFO     | 
[2026-03-03 17:18:58] 2026-03-03 22:17:55,388 | INFO     | job summary report
[2026-03-03 17:18:58] 2026-03-03 22:17:55,388 | INFO     | --------------------------------------------------
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | PanDA job id: 7031090371
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | task id: 48838432
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | errors: (none)
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | pilot state: finished 
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | transexitcode: 0
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | exeerrorcode: 0
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | exeerrordiag: 
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | exitcode: 0
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | exitmsg: OK
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | cpuconsumptiontime: 37784 s
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | nevents: 400
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | neventsw: 0
[2026-03-03 17:18:58] 2026-03-03 22:17:55,389 | INFO     | pid: 3359506
[2026-03-03 17:18:58] 2026-03-03 22:17:55,390 | INFO     | pgrp: 3359506
[2026-03-03 17:18:58] 2026-03-03 22:17:55,390 | INFO     | corecount: 8
[2026-03-03 17:18:58] 2026-03-03 22:17:55,390 | INFO     | event service: False
[2026-03-03 17:18:58] 2026-03-03 22:17:55,390 | INFO     | sizes: {0: 2286603, 1: 2287120, 12: 2287120, 23472: 2321761, 23473: 2321760, 23477: 2330814, 23479: 2330998, 23480: 2331192}
[2026-03-03 17:18:58] 2026-03-03 22:17:55,390 | INFO     | --------------------------------------------------
[2026-03-03 17:18:58] 2026-03-03 22:17:55,390 | INFO     | 
[2026-03-03 17:18:58] 2026-03-03 22:17:55,400 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 17:18:58] 2026-03-03 22:17:55,502 | INFO     | job 7031090371 has completed (purged errors)
[2026-03-03 17:18:58] 2026-03-03 22:17:55,503 | INFO     | overall cleanup function is called
[2026-03-03 17:18:58] 2026-03-03 22:17:56,530 | INFO     | --- collectZombieJob: --- 10, [3359506]
[2026-03-03 17:18:58] 2026-03-03 22:17:56,530 | INFO     | zombie collector waiting for pid 3359506
[2026-03-03 17:18:58] 2026-03-03 22:17:56,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 17:18:58] 2026-03-03 22:17:56,531 | INFO     | collected zombie processes
[2026-03-03 17:18:58] 2026-03-03 22:17:56,531 | INFO     | will attempt to kill all subprocesses of pid=3359506
[2026-03-03 17:18:58] 2026-03-03 22:17:58,030 | INFO     | process IDs to be killed: [3359506] (in reverse order)
[2026-03-03 17:18:58] 2026-03-03 22:17:58,287 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 17:18:58] 2026-03-03 22:17:58,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 17:18:58] 2026-03-03 22:17:58,319 | INFO     | did not find any defunct processes belonging to 3359506
[2026-03-03 17:18:58] 2026-03-03 22:17:58,359 | INFO     | did not find any defunct processes belonging to 3359506
[2026-03-03 17:18:58] 2026-03-03 22:17:58,359 | INFO     | ready for new job
[2026-03-03 17:18:58] 2026-03-03 22:17:58,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 17:18:58] 2026-03-03 22:17:58,364 | INFO     | **************************************
[2026-03-03 17:18:58] 2026-03-03 22:17:58,364 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 17:18:58] 2026-03-03 22:17:58,364 | INFO     | **************************************
[2026-03-03 17:18:58] 2026-03-03 22:17:58,364 | INFO     | 
[2026-03-03 17:18:58] 2026-03-03 22:17:58,377 | INFO     | architecture information:
[2026-03-03 17:18:58] 2026-03-03 22:17:58,385 | INFO     | executing command: cat /etc/os-release
[2026-03-03 17:18:58] 2026-03-03 22:17:58,431 | INFO     | cat /etc/os-release:
[2026-03-03 17:18:58] NAME="CentOS Linux"
[2026-03-03 17:18:58] VERSION="7 (Core)"
[2026-03-03 17:18:58] ID="centos"
[2026-03-03 17:18:58] ID_LIKE="rhel fedora"
[2026-03-03 17:18:58] VERSION_ID="7"
[2026-03-03 17:18:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 17:18:58] ANSI_COLOR="0;31"
[2026-03-03 17:18:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 17:18:58] HOME_URL="https://www.centos.org/"
[2026-03-03 17:18:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 17:18:58] 
[2026-03-03 17:18:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 17:18:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 17:18:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 17:18:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 17:18:58] 
[2026-03-03 17:18:58] 2026-03-03 22:17:58,432 | INFO     | **************************************
[2026-03-03 17:18:58] 2026-03-03 22:17:58,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-03 17:18:58] 2026-03-03 22:17:59,048 | INFO     | sufficient remaining disk space (72715599872 B)
[2026-03-03 17:18:58] 2026-03-03 22:17:59,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 17:18:58] 2026-03-03 22:17:59,049 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 17:18:58] 2026-03-03 22:17:59,049 | INFO     | update_server=False
[2026-03-03 17:18:58] 2026-03-03 22:17:59,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 17:18:58] 2026-03-03 22:17:59,326 | INFO     | all payload control threads have been joined
[2026-03-03 17:18:58] 2026-03-03 22:17:59,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:18:58] 2026-03-03 22:17:59,513 | INFO     | aborting loop
[2026-03-03 17:18:58] 2026-03-03 22:17:59,625 | INFO     | all data control threads have been joined
[2026-03-03 17:18:58] 2026-03-03 22:17:59,665 | INFO     | all job control threads have been joined
[2026-03-03 17:18:58] 2026-03-03 22:18:00,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 17:18:58] 2026-03-03 22:18:00,054 | INFO     | [job] retrieve thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,091 | INFO     | [payload] failed_post thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:18:58] 2026-03-03 22:18:00,331 | INFO     | [payload] control thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,350 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,441 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,445 | INFO     | [payload] validate_post thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,519 | INFO     | [job] job monitor thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 17:18:58] 2026-03-03 22:18:00,632 | INFO     | [data] control thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,659 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,670 | INFO     | [job] control thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:00,995 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:01,242 | INFO     | [job] queue monitor thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:01,384 | INFO     | [data] copytool_in thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:01,411 | INFO     | [job] validate thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:02,034 | INFO     | [data] copytool_out thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:04,627 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 17:18:58] 2026-03-03 22:18:05,765 | INFO     | [monitor] cgroup control has ended
[2026-03-03 17:18:58] 2026-03-03 22:18:07,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633060009792)>', '<ExcThread(monitor, started 139632717055744)>']
[2026-03-03 17:18:58] 2026-03-03 22:18:12,814 | INFO     | all workflow threads have been joined
[2026-03-03 17:18:58] 2026-03-03 22:18:12,814 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 17:18:58] 2026-03-03 22:18:12,814 | INFO     | traces error code: 0
[2026-03-03 17:18:58] 2026-03-03 22:18:12,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 17:18:58] 2026-03-03 22:18:29,891 | INFO     | PID=3336436 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 17:18:58] 2026-03-03 22:18:29,892 | INFO     | .. there are 64 such processes running
[2026-03-03 17:18:58] 2026-03-03 22:18:29,892 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 17:18:58] 2026-03-03 22:18:29,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 17:18:58] 2026-03-03 22:18:29,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 17:18:58] 2026-03-03 22:18:29,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 17:18:58] 2026-03-03 22:18:29,906 | INFO     | [monitor] control thread has ended
[2026-03-03 17:18:58] 2026-03-03 22:18:30,230 [wrapper] ==== pilot stdout END ====
[2026-03-03 17:18:58] 2026-03-03 22:18:30,234 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 17:18:58] 2026-03-03 22:18:30,250 [wrapper] pilotpid: 3336436
[2026-03-03 17:18:58] 2026-03-03 22:18:30,273 [wrapper] Pilot exit status: 0
[2026-03-03 17:18:58] 2026-03-03 22:18:30,316 [wrapper] pandaids: 7031090371 7031090371
[2026-03-03 17:18:58] 2026-03-03 22:18:30,467 [wrapper] cleanup supervisor_pilot  123992 3336437
[2026-03-03 17:18:58] 2026-03-03 22:18:30,508 [wrapper] Test setup, not cleaning
[2026-03-03 17:18:58] 2026-03-03 22:18:30,523 [wrapper] apfmon messages muted
[2026-03-03 17:18:58] 2026-03-03 22:18:30,527 [wrapper] ==== wrapper stdout END ====
[2026-03-03 17:18:58] 2026-03-03 22:18:30,530 [wrapper] ==== wrapper stderr END ====
[2026-03-03 17:18:58]  *** Error codes and diagnostics ***
[2026-03-03 17:18:58]     "exeErrorCode": 0,
[2026-03-03 17:18:58]     "exeErrorDiag": "",
[2026-03-03 17:18:58]     "pilotErrorCode": 0,
[2026-03-03 17:18:58]     "pilotErrorDiag": "",
[2026-03-03 17:18:58]  *** Listing of results directory ***
[2026-03-03 17:18:58] total 786272
[2026-03-03 17:18:58] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas    584627 Feb 26 19:16 pilot3.tar.gz
[2026-03-03 17:18:58] -rwx------. 1 boincer umatlas     36322 Feb 26 19:20 runpilot2-wrapper.sh
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas      5111 Feb 26 19:23 queuedata.json
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas       100 Mar  2 21:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 17:18:58] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  2 21:32 run_atlas
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas       105 Mar  2 21:32 job.xml
[2026-03-03 17:18:58] -rw-r--r--. 3 boincer umatlas 284963638 Mar  2 21:32 EVNT.48220101._000121.pool.root.1
[2026-03-03 17:18:58] -rw-r--r--. 3 boincer umatlas 284963638 Mar  2 21:32 ATLAS.root_0
[2026-03-03 17:18:58] -rw-r--r--. 2 boincer umatlas     15845 Mar  2 21:32 start_atlas.sh
[2026-03-03 17:18:58] drwxrwx--x. 2 boincer umatlas      4096 Mar  2 21:32 shared
[2026-03-03 17:18:58] -rw-r--r--. 2 boincer umatlas    597983 Mar  2 21:32 input.tar.gz
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas         0 Mar  2 21:32 boinc_lockfile
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas      2581 Mar  3 10:45 pandaJob.out
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas        57 Mar  3 10:45 setup.sh.local
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas    998508 Mar  3 10:46 agis_schedconf.cvmfs.json
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas       429 Mar  3 10:46 workernode_map.json
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas      6944 Mar  3 17:11 init_data.xml
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas 224756206 Mar  3 17:17 HITS.48838432._003112.pool.root.1
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas       532 Mar  3 17:17 boinc_task_state.xml
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas      1046 Mar  3 17:17 memory_monitor_summary.json
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas   1516092 Mar  3 17:17 agis_ddmendpoints.agis.ALL.json
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas        96 Mar  3 17:17 pilot_heartbeat.json
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas    561378 Mar  3 17:17 log.48838432._003112.job.log.tgz.1
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas      6350 Mar  3 17:17 heartbeat.json
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas       823 Mar  3 17:18 pilotlog.txt
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas   2693435 Mar  3 17:18 log.48838432._003112.job.log.1
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas       357 Mar  3 17:18 output.list
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas       620 Mar  3 17:18 runtime_log
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas   3276800 Mar  3 17:18 result.tar.gz
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas      9422 Mar  3 17:18 runtime_log.err
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas       784 Mar  3 17:18 qsLNDmil0F9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxI2KDmh7Ybum.diag
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas        28 Mar  3 17:18 wrapper_checkpoint.txt
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 17:18 boinc_mmap_file
[2026-03-03 17:18:58] -rw-r--r--. 1 boincer umatlas     23471 Mar  3 17:18 stderr.txt
[2026-03-03 17:18:58] HITS file was successfully produced:
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas 224756206 Mar  3 17:17 shared/HITS.pool.root.1
[2026-03-03 17:18:58]  *** Contents of shared directory: ***
[2026-03-03 17:18:58] total 501588
[2026-03-03 17:18:58] -rw-r--r--. 3 boincer umatlas 284963638 Mar  2 21:32 ATLAS.root_0
[2026-03-03 17:18:58] -rw-r--r--. 2 boincer umatlas     15845 Mar  2 21:32 start_atlas.sh
[2026-03-03 17:18:58] -rw-r--r--. 2 boincer umatlas    597983 Mar  2 21:32 input.tar.gz
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas 224756206 Mar  3 17:17 HITS.pool.root.1
[2026-03-03 17:18:58] -rw-------. 1 boincer umatlas   3276800 Mar  3 17:18 result.tar.gz
17:19:00 (3292438): run_atlas exited; CPU time 39163.534279
17:19:00 (3292438): called boinc_finish(0)

</stderr_txt>
]]>

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