Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:07:21 (2616327): wrapper (7.7.26015): starting
07:07:21 (2616327): wrapper: running run_atlas (--nthreads 5)
[2026-03-03 07:07:21] Arguments: --nthreads 5
[2026-03-03 07:07:21] Threads: 5
[2026-03-03 07:07:21] Checking for CVMFS
[2026-03-03 07:07:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 07:07:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 07:07:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 07:07:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 07:07:22] 2.11.0.0 919232 8433 96772 156843 1 188 3715536 4096001 6410 130560 0 18098263 99.996 314345 1251 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 07:07:22] CVMFS is ok
[2026-03-03 07:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 07:07:22] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 07:07:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 07:07:22] Further information can be found at the LHC@home message board.
[2026-03-03 07:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 07:07:22] Checking for apptainer binary...
[2026-03-03 07:07:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 07:07:22] Running /usr/bin/apptainer --version
[2026-03-03 07:07:22] apptainer version 1.4.5
[2026-03-03 07:07:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 07:07:22] x32-linux4
[2026-03-03 07:07:22] apptainer works
[2026-03-03 07:07:22] Set ATHENA_PROC_NUMBER=5
[2026-03-03 07:07:22] Set ATHENA_CORE_NUMBER=5
[2026-03-03 07:07:22] Starting ATLAS job with PandaID=7032466299
[2026-03-03 07:07:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 08:38:04]  *** The last 200 lines of the pilot log: ***
[2026-03-03 08:38:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 08:38:04]  is_altstaged=None
[2026-03-03 08:38:04]  is_tar=False
[2026-03-03 08:38:04]  lfn=log.48700922._001072.job.log.tgz.1
[2026-03-03 08:38:04]  mtime=0
[2026-03-03 08:38:04]  protocol_id=None
[2026-03-03 08:38:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 08:38:04]  replicas=None
[2026-03-03 08:38:04]  scope=mc23_13p6TeV
[2026-03-03 08:38:04]  status=None
[2026-03-03 08:38:04]  status_code=0
[2026-03-03 08:38:04]  storage_token=
[2026-03-03 08:38:04]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-7032466299/log.48700922._001072.job.log.tgz.1
[2026-03-03 08:38:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/75/log.48700922._001072.job.log.tgz.1
[2026-03-03 08:38:04]  workdir=None
[2026-03-03 08:38:04] ]
[2026-03-03 08:38:04] 2026-03-03 13:37:26,728 | INFO     | monitor loop #402: job 0:7032466299 is in state 'stageout'
[2026-03-03 08:38:04] 2026-03-03 13:37:26,738 | WARNING  | aborting job monitor tasks since payload process 2624736 is not running
[2026-03-03 08:38:04] 2026-03-03 13:37:26,738 | INFO     | transferring file log.48700922._001072.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-7032466299/log.48700922._001072.job.log.tgz.1 to /var/lib/boinc
[2026-03-03 08:38:04] 2026-03-03 13:37:26,738 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-7032466299/log.48700922._001072.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.487009
[2026-03-03 08:38:04] 2026-03-03 13:37:26,767 | INFO     | adding to output.list: log.48700922._001072.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/75/log.48700922._001072.job.log.tg
[2026-03-03 08:38:04] 2026-03-03 13:37:26,768 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 08:38:04] 2026-03-03 13:37:26,768 | INFO     | summary of transferred files:
[2026-03-03 08:38:04] 2026-03-03 13:37:26,768 | INFO     |  -- lfn=log.48700922._001072.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 08:38:04] 2026-03-03 13:37:26,768 | INFO     | stage-out finished correctly
[2026-03-03 08:38:04] 2026-03-03 13:37:28,442 | INFO     | time since job start (5391s) is within the limit (349056.0s)
[2026-03-03 08:38:04] 2026-03-03 13:37:29,244 | INFO     | monitor loop #403: job 0:7032466299 is in state 'finished'
[2026-03-03 08:38:04] 2026-03-03 13:37:29,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 08:38:04] 2026-03-03 13:37:29,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 08:38:04] 2026-03-03 13:37:30,362 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-03-03 08:38:04] 2026-03-03 13:37:30,447 | INFO     | time since job start (5393s) is within the limit (349056.0s)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,413 | INFO     | job 7032466299 has state=finished
[2026-03-03 08:38:04] 2026-03-03 13:37:31,413 | INFO     | preparing for final server update for job 7032466299 in state='finished'
[2026-03-03 08:38:04] 2026-03-03 13:37:31,413 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-7032466299/jobReport.json
[2026-03-03 08:38:04] 2026-03-03 13:37:31,415 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-03-03 08:38:04] 2026-03-03 13:37:31,415 | INFO     | this job has now completed (state=finished)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,415 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,415 | INFO     | log transfer has been attempted: DONE
[2026-03-03 08:38:04] 2026-03-03 13:37:31,415 | INFO     | job 7032466299 has finished - writing final server update
[2026-03-03 08:38:04] 2026-03-03 13:37:31,416 | INFO     | total number of processed events: 400 (read)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,428 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-7032466299/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,429 | INFO     | extracted standard info from prmon json
[2026-03-03 08:38:04] 2026-03-03 13:37:31,429 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 08:38:04] 2026-03-03 13:37:31,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 08:38:04] 2026-03-03 13:37:31,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 08:38:04] 2026-03-03 13:37:31,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 08:38:04] 2026-03-03 13:37:31,430 | INFO     | fitting pss+swap vs Time
[2026-03-03 08:38:04] 2026-03-03 13:37:31,430 | INFO     | sum of square deviations: 164765880.0
[2026-03-03 08:38:04] 2026-03-03 13:37:31,431 | INFO     | sum of deviations: 898597832.0
[2026-03-03 08:38:04] 2026-03-03 13:37:31,431 | INFO     | mean x: 1772542425.0
[2026-03-03 08:38:04] 2026-03-03 13:37:31,431 | INFO     | mean y: 2337200.7283950616
[2026-03-03 08:38:04] 2026-03-03 13:37:31,431 | INFO     | intersect: -9664729671.569574
[2026-03-03 08:38:04] 2026-03-03 13:37:31,431 | INFO     | chi2: 0.0006710202255060635
[2026-03-03 08:38:04] 2026-03-03 13:37:31,431 | INFO     | current memory leak: 5.45 B/s (using 81 data points, chi2=0.00)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,431 | INFO     | could have reported an average CPU frequency of 3883 MHz (6 samples)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,432 | INFO     | ..............................
[2026-03-03 08:38:04] 2026-03-03 13:37:31,432 | INFO     | . Timing measurements:
[2026-03-03 08:38:04] 2026-03-03 13:37:31,432 | INFO     | . get job = 0 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,432 | INFO     | . initial setup = 6 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,432 | INFO     | . payload setup = 5 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,433 | INFO     | . stage-in = 0 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,433 | INFO     | . payload execution = 5367 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,433 | INFO     | . stage-out = 0 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,433 | INFO     | . log creation = 0 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,433 | INFO     | ..............................
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | 
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | job summary report
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | --------------------------------------------------
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | PanDA job id: 7032466299
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | task id: 48700922
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | errors: (none)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | pilot state: finished 
[2026-03-03 08:38:04] 2026-03-03 13:37:31,542 | INFO     | transexitcode: 0
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | exeerrorcode: 0
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | exeerrordiag: 
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | exitcode: 0
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | exitmsg: OK
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | cpuconsumptiontime: 21393 s
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | nevents: 400
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | neventsw: 0
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | pid: 2624736
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | pgrp: 2624736
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | corecount: 5
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | event service: False
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | sizes: {0: 2287046, 11: 2287046, 5376: 2313632, 5378: 2322644, 5381: 2322700, 5383: 2322894}
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | --------------------------------------------------
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | 
[2026-03-03 08:38:04] 2026-03-03 13:37:31,543 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-03 08:38:04] 2026-03-03 13:37:31,575 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | job 7032466299 has completed (purged errors)
[2026-03-03 08:38:04] 2026-03-03 13:37:31,577 | INFO     | overall cleanup function is called
[2026-03-03 08:38:04] 2026-03-03 13:37:32,588 | INFO     | --- collectZombieJob: --- 10, [2624736]
[2026-03-03 08:38:04] 2026-03-03 13:37:32,588 | INFO     | zombie collector waiting for pid 2624736
[2026-03-03 08:38:04] 2026-03-03 13:37:32,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 08:38:04] 2026-03-03 13:37:32,588 | INFO     | collected zombie processes
[2026-03-03 08:38:04] 2026-03-03 13:37:32,588 | INFO     | will attempt to kill all subprocesses of pid=2624736
[2026-03-03 08:38:04] 2026-03-03 13:37:32,883 | INFO     | process IDs to be killed: [2624736] (in reverse order)
[2026-03-03 08:38:04] 2026-03-03 13:37:33,001 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 08:38:04] 2026-03-03 13:37:33,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 08:38:04] 2026-03-03 13:37:33,010 | INFO     | did not find any defunct processes belonging to 2624736
[2026-03-03 08:38:04] 2026-03-03 13:37:33,020 | INFO     | did not find any defunct processes belonging to 2624736
[2026-03-03 08:38:04] 2026-03-03 13:37:33,020 | INFO     | ready for new job
[2026-03-03 08:38:04] 2026-03-03 13:37:33,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 08:38:04] 2026-03-03 13:37:33,021 | INFO     | **************************************
[2026-03-03 08:38:04] 2026-03-03 13:37:33,021 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 08:38:04] 2026-03-03 13:37:33,021 | INFO     | **************************************
[2026-03-03 08:38:04] 2026-03-03 13:37:33,021 | INFO     | 
[2026-03-03 08:38:04] 2026-03-03 13:37:33,027 | INFO     | architecture information:
[2026-03-03 08:38:04] 2026-03-03 13:37:33,031 | INFO     | executing command: cat /etc/os-release
[2026-03-03 08:38:04] 2026-03-03 13:37:33,053 | INFO     | cat /etc/os-release:
[2026-03-03 08:38:04] NAME="CentOS Linux"
[2026-03-03 08:38:04] VERSION="7 (Core)"
[2026-03-03 08:38:04] ID="centos"
[2026-03-03 08:38:04] ID_LIKE="rhel fedora"
[2026-03-03 08:38:04] VERSION_ID="7"
[2026-03-03 08:38:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 08:38:04] ANSI_COLOR="0;31"
[2026-03-03 08:38:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 08:38:04] HOME_URL="https://www.centos.org/"
[2026-03-03 08:38:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 08:38:04] 
[2026-03-03 08:38:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 08:38:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 08:38:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 08:38:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 08:38:04] 
[2026-03-03 08:38:04] 2026-03-03 13:37:33,053 | INFO     | **************************************
[2026-03-03 08:38:04] 2026-03-03 13:37:33,555 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-03 08:38:04] 2026-03-03 13:37:33,577 | INFO     | sufficient remaining disk space (137022668800 B)
[2026-03-03 08:38:04] 2026-03-03 13:37:33,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 08:38:04] 2026-03-03 13:37:33,578 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 08:38:04] 2026-03-03 13:37:33,578 | INFO     | update_server=False
[2026-03-03 08:38:04] 2026-03-03 13:37:33,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 08:38:04] 2026-03-03 13:37:33,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 08:38:04] 2026-03-03 13:37:33,578 | INFO     | aborting loop
[2026-03-03 08:38:04] 2026-03-03 13:37:33,871 | INFO     | all payload control threads have been joined
[2026-03-03 08:38:04] 2026-03-03 13:37:33,967 | INFO     | all data control threads have been joined
[2026-03-03 08:38:04] 2026-03-03 13:37:34,070 | INFO     | all job control threads have been joined
[2026-03-03 08:38:04] 2026-03-03 13:37:34,583 | INFO     | [job] job monitor thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:34,584 | INFO     | [job] retrieve thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:34,645 | INFO     | [job] validate thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:34,645 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:34,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 08:38:04] 2026-03-03 13:37:34,876 | INFO     | [payload] control thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:34,935 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:34,972 | INFO     | [data] control thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:35,075 | INFO     | [job] control thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:35,147 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:35,225 | INFO     | [data] copytool_in thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:35,246 | INFO     | [payload] validate_post thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:35,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 08:38:04] 2026-03-03 13:37:35,973 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:36,024 | INFO     | [payload] failed_post thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:36,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 08:38:04] 2026-03-03 13:37:36,871 | INFO     | [data] copytool_out thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:37,557 | INFO     | [job] queue monitor thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:39,413 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 08:38:04] 2026-03-03 13:37:45,708 | INFO     | [monitor] cgroup control has ended
[2026-03-03 08:38:04] 2026-03-03 13:37:45,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138836129761088)>', '<ExcThread(monitor, started 138835774117632)>']
[2026-03-03 08:38:04] 2026-03-03 13:37:50,783 | INFO     | all workflow threads have been joined
[2026-03-03 08:38:04] 2026-03-03 13:37:50,783 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 08:38:04] 2026-03-03 13:37:50,783 | INFO     | traces error code: 0
[2026-03-03 08:38:04] 2026-03-03 13:37:50,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 08:38:04] 2026-03-03 13:38:03,777 | INFO     | PID=2620168 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 08:38:04] 2026-03-03 13:38:03,778 | INFO     | .. there are 8 such processes running
[2026-03-03 08:38:04] 2026-03-03 13:38:03,778 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 08:38:04] 2026-03-03 13:38:03,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 08:38:04] 2026-03-03 13:38:03,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 08:38:04] 2026-03-03 13:38:03,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 08:38:04] 2026-03-03 13:38:03,778 | INFO     | [monitor] control thread has ended
[2026-03-03 08:38:04] 2026-03-03 13:38:03,855 [wrapper] ==== pilot stdout END ====
[2026-03-03 08:38:04] 2026-03-03 13:38:03,862 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 08:38:04] 2026-03-03 13:38:03,867 [wrapper] pilotpid: 2620168
[2026-03-03 08:38:04] 2026-03-03 13:38:03,870 [wrapper] Pilot exit status: 0
[2026-03-03 08:38:04] 2026-03-03 13:38:03,892 [wrapper] pandaids: 7032466299
[2026-03-03 08:38:04] 2026-03-03 13:38:03,967 [wrapper] cleanup supervisor_pilot 2697826 2620169
[2026-03-03 08:38:04] 2026-03-03 13:38:03,974 [wrapper] Test setup, not cleaning
[2026-03-03 08:38:04] 2026-03-03 13:38:03,978 [wrapper] apfmon messages muted
[2026-03-03 08:38:04] 2026-03-03 13:38:03,984 [wrapper] ==== wrapper stdout END ====
[2026-03-03 08:38:04] 2026-03-03 13:38:03,989 [wrapper] ==== wrapper stderr END ====
[2026-03-03 08:38:04]  *** Error codes and diagnostics ***
[2026-03-03 08:38:04]     "exeErrorCode": 0,
[2026-03-03 08:38:04]     "exeErrorDiag": "",
[2026-03-03 08:38:04]     "pilotErrorCode": 0,
[2026-03-03 08:38:04]     "pilotErrorDiag": "",
[2026-03-03 08:38:04]  *** Listing of results directory ***
[2026-03-03 08:38:04] total 335060
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc      5111 Feb 27 23:15 queuedata.json
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc    584627 Feb 27 23:15 pilot3.tar.gz
[2026-03-03 08:38:04] -rwx------ 1 boinc boinc     36322 Feb 27 23:15 runpilot2-wrapper.sh
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc       100 Mar  3 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 08:38:04] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 07:07 run_atlas
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc       105 Mar  3 07:07 job.xml
[2026-03-03 08:38:04] -rw-r--r-- 2 boinc boinc 187321656 Mar  3 07:07 EVNT.48700920._000043.pool.root.1
[2026-03-03 08:38:04] -rw-r--r-- 2 boinc boinc     15845 Mar  3 07:07 start_atlas.sh
[2026-03-03 08:38:04] drwxrwx--x 2 boinc boinc      4096 Mar  3 07:07 shared
[2026-03-03 08:38:04] -rw-r--r-- 2 boinc boinc    597933 Mar  3 07:07 input.tar.gz
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc      9742 Mar  3 07:07 init_data.xml
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc         0 Mar  3 07:07 boinc_setup_complete
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc         0 Mar  3 07:07 boinc_lockfile
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc      2517 Mar  3 07:07 pandaJob.out
[2026-03-03 08:38:04] -rw------- 1 boinc boinc    998442 Mar  3 07:07 agis_schedconf.cvmfs.json
[2026-03-03 08:38:04] -rw------- 1 boinc boinc   1516104 Mar  3 07:07 agis_ddmendpoints.agis.ALL.json
[2026-03-03 08:38:04] -rw------- 1 boinc boinc       424 Mar  3 07:07 workernode_map.json
[2026-03-03 08:38:04] drwx------ 5 boinc boinc      4096 Mar  3 07:07 pilot3
[2026-03-03 08:38:04] -rw------- 1 boinc boinc 149652457 Mar  3 08:37 HITS.48700922._001072.pool.root.1
[2026-03-03 08:38:04] -rw------- 1 boinc boinc        95 Mar  3 08:37 pilot_heartbeat.json
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc       529 Mar  3 08:37 boinc_task_state.xml
[2026-03-03 08:38:04] -rw------- 1 boinc boinc      1024 Mar  3 08:37 memory_monitor_summary.json
[2026-03-03 08:38:04] -rw------- 1 boinc boinc    302356 Mar  3 08:37 log.48700922._001072.job.log.tgz.1
[2026-03-03 08:38:04] -rw------- 1 boinc boinc      6283 Mar  3 08:37 heartbeat.json
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc        27 Mar  3 08:38 wrapper_checkpoint.txt
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc      8192 Mar  3 08:38 boinc_mmap_file
[2026-03-03 08:38:04] -rw------- 1 boinc boinc       822 Mar  3 08:38 pilotlog.txt
[2026-03-03 08:38:04] -rw------- 1 boinc boinc    791052 Mar  3 08:38 log.48700922._001072.job.log.1
[2026-03-03 08:38:04] -rw------- 1 boinc boinc       357 Mar  3 08:38 output.list
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc       620 Mar  3 08:38 runtime_log
[2026-03-03 08:38:04] -rw------- 1 boinc boinc   1116160 Mar  3 08:38 result.tar.gz
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc      8891 Mar  3 08:38 runtime_log.err
[2026-03-03 08:38:04] -rw------- 1 boinc boinc       644 Mar  3 08:38 qxRNDmluQG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOV4KDmtw6Bzn.diag
[2026-03-03 08:38:04] -rw-r--r-- 1 boinc boinc     21515 Mar  3 08:38 stderr.txt
[2026-03-03 08:38:04] HITS file was successfully produced:
[2026-03-03 08:38:04] -rw------- 1 boinc boinc 149652457 Mar  3 08:37 shared/HITS.pool.root.1
[2026-03-03 08:38:04]  *** Contents of shared directory: ***
[2026-03-03 08:38:04] total 330780
[2026-03-03 08:38:04] -rw-r--r-- 2 boinc boinc 187321656 Mar  3 07:07 ATLAS.root_0
[2026-03-03 08:38:04] -rw-r--r-- 2 boinc boinc     15845 Mar  3 07:07 start_atlas.sh
[2026-03-03 08:38:04] -rw-r--r-- 2 boinc boinc    597933 Mar  3 07:07 input.tar.gz
[2026-03-03 08:38:04] -rw------- 1 boinc boinc 149652457 Mar  3 08:37 HITS.pool.root.1
[2026-03-03 08:38:04] -rw------- 1 boinc boinc   1116160 Mar  3 08:38 result.tar.gz
08:38:05 (2616327): run_atlas exited; CPU time 21475.049237
08:38:05 (2616327): called boinc_finish(0)

</stderr_txt>
]]>

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