Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:54:27 (208489): wrapper (7.7.26015): starting
19:54:27 (208489): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 19:54:27] Arguments: --nthreads 4
[2026-03-03 19:54:27] Threads: 4
[2026-03-03 19:54:27] Checking for CVMFS
[2026-03-03 19:54:27] No cvmfs_config command found, will try listing directly
[2026-03-03 19:54:27] CVMFS is ok
[2026-03-03 19:54:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 19:54:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 19:54:27] Further information can be found at the LHC@home message board.
[2026-03-03 19:54:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 19:54:27] Checking for apptainer binary...
[2026-03-03 19:54:27] which: no apptainer in ((null))
[2026-03-03 19:54:27] apptainer is not installed, using version from CVMFS
[2026-03-03 19:54:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 19:54:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-03 19:54:28] apptainer works
[2026-03-03 19:54:28] Set ATHENA_PROC_NUMBER=4
[2026-03-03 19:54:28] Set ATHENA_CORE_NUMBER=4
[2026-03-03 19:54:28] Starting ATLAS job with PandaID=7036121874
[2026-03-03 19:54:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 23:13:36]  *** The last 200 lines of the pilot log: ***
[2026-03-03 23:13:36] 2026-03-03 22:05:23,447 | INFO     | preparing for final server update for job 7036121874 in state='finished'
[2026-03-03 23:13:36] 2026-03-03 22:05:23,447 | INFO     | reading metadata from: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036121874/jobReport.json
[2026-03-03 23:13:36] 2026-03-03 22:05:23,449 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot88/slots/0/workernode_map.json
[2026-03-03 23:13:36] 2026-03-03 22:05:23,450 | INFO     | this job has now completed (state=finished)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,450 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,450 | INFO     | log transfer has been attempted: DONE
[2026-03-03 23:13:36] 2026-03-03 22:05:23,450 | INFO     | job 7036121874 has finished - writing final server update
[2026-03-03 23:13:36] 2026-03-03 22:05:23,451 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2345660/.job.ad'
[2026-03-03 23:13:36] 2026-03-03 22:05:23,451 | INFO     | total number of processed events: 400 (read)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,480 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036121874/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,481 | INFO     | extracted standard info from prmon json
[2026-03-03 23:13:36] 2026-03-03 22:05:23,481 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 23:13:36] 2026-03-03 22:05:23,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 23:13:36] 2026-03-03 22:05:23,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 23:13:36] 2026-03-03 22:05:23,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 23:13:36] 2026-03-03 22:05:23,486 | INFO     | fitting pss+swap vs Time
[2026-03-03 23:13:36] 2026-03-03 22:05:23,486 | INFO     | sum of square deviations: 2027639878.0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,487 | INFO     | sum of deviations: 25634945854.000004
[2026-03-03 23:13:36] 2026-03-03 22:05:23,487 | INFO     | mean x: 1772569792.0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,487 | INFO     | mean y: 2330338.7005347596
[2026-03-03 23:13:36] 2026-03-03 22:05:23,487 | INFO     | intersect: -22407827960.798073
[2026-03-03 23:13:36] 2026-03-03 22:05:23,488 | INFO     | chi2: 1.3105784084201861
[2026-03-03 23:13:36] 2026-03-03 22:05:23,488 | INFO     | sum of square deviations: 1869302025.5
[2026-03-03 23:13:36] 2026-03-03 22:05:23,490 | INFO     | sum of deviations: 24846374301.5
[2026-03-03 23:13:36] 2026-03-03 22:05:23,490 | INFO     | mean x: 1772569639.5
[2026-03-03 23:13:36] 2026-03-03 22:05:23,490 | INFO     | mean y: 2329578.9285714286
[2026-03-03 23:13:36] 2026-03-03 22:05:23,490 | INFO     | intersect: -23558297937.489815
[2026-03-03 23:13:36] 2026-03-03 22:05:23,490 | INFO     | chi2: 1.3112868029473026
[2026-03-03 23:13:36] 2026-03-03 22:05:23,490 | INFO     | current chi2=1.3112868029473026 (change=-0.05405205232782559 %)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,490 | INFO     | right removable region: 181
[2026-03-03 23:13:36] 2026-03-03 22:05:23,491 | INFO     | sum of square deviations: 1869302025.5
[2026-03-03 23:13:36] 2026-03-03 22:05:23,492 | INFO     | sum of deviations: 2510119957.5
[2026-03-03 23:13:36] 2026-03-03 22:05:23,492 | INFO     | mean x: 1772569944.5
[2026-03-03 23:13:36] 2026-03-03 22:05:23,492 | INFO     | mean y: 2352281.104395604
[2026-03-03 23:13:36] 2026-03-03 22:05:23,492 | INFO     | intersect: -2377874741.09872
[2026-03-03 23:13:36] 2026-03-03 22:05:23,492 | INFO     | chi2: 0.0018576755234360931
[2026-03-03 23:13:36] 2026-03-03 22:05:23,493 | INFO     | current chi2=0.0018576755234360931 (change=99.85825529312089 %)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,493 | INFO     | sum of square deviations: 1719429448.0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,494 | INFO     | sum of deviations: 2817447198.9999995
[2026-03-03 23:13:36] 2026-03-03 22:05:23,494 | INFO     | mean x: 1772570097.0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,494 | INFO     | mean y: 2351964.9830508474
[2026-03-03 23:13:36] 2026-03-03 22:05:23,494 | INFO     | intersect: -2902171195.6693697
[2026-03-03 23:13:36] 2026-03-03 22:05:23,495 | INFO     | chi2: 0.0014363000841461546
[2026-03-03 23:13:36] 2026-03-03 22:05:23,495 | INFO     | current chi2=0.0014363000841461546 (change=22.68294080284438 %)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,495 | INFO     | left removable region: 20
[2026-03-03 23:13:36] 2026-03-03 22:05:23,495 | INFO     | sum of square deviations: 1294014960.0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,496 | INFO     | sum of deviations: 1326756466.0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,496 | INFO     | mean x: 1772570219.0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,496 | INFO     | mean y: 2353296.298136646
[2026-03-03 23:13:36] 2026-03-03 22:05:23,496 | INFO     | intersect: -1815066959.4130385
[2026-03-03 23:13:36] 2026-03-03 22:05:23,497 | INFO     | chi2: 0.00016223303043949803
[2026-03-03 23:13:36] 2026-03-03 22:05:23,497 | INFO     | current memory leak: 1.03 B/s (using 161 data points, chi2=0.00)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,497 | INFO     | could have reported an average CPU frequency of 2701 MHz (10 samples)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,497 | INFO     | ..............................
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . Timing measurements:
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . get job = 0 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . initial setup = 8 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . payload setup = 9 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . stage-in = 0 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . payload execution = 11405 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . stage-out = 1 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | . log creation = 0 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,498 | INFO     | ..............................
[2026-03-03 23:13:36] 2026-03-03 22:05:23,895 | INFO     | 
[2026-03-03 23:13:36] 2026-03-03 22:05:23,895 | INFO     | job summary report
[2026-03-03 23:13:36] 2026-03-03 22:05:23,895 | INFO     | --------------------------------------------------
[2026-03-03 23:13:36] 2026-03-03 22:05:23,895 | INFO     | PanDA job id: 7036121874
[2026-03-03 23:13:36] 2026-03-03 22:05:23,895 | INFO     | task id: 48848682
[2026-03-03 23:13:36] 2026-03-03 22:05:23,895 | INFO     | errors: (none)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,895 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | pilot state: finished 
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | transexitcode: 0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | exeerrorcode: 0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | exeerrordiag: 
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | exitcode: 0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | exitmsg: OK
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | cpuconsumptiontime: 43984 s
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | nevents: 400
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | neventsw: 0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | pid: 256702
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | pgrp: 256702
[2026-03-03 23:13:36] 2026-03-03 22:05:23,896 | INFO     | corecount: 4
[2026-03-03 23:13:36] 2026-03-03 22:05:23,897 | INFO     | event service: False
[2026-03-03 23:13:36] 2026-03-03 22:05:23,897 | INFO     | sizes: {0: 2286720, 1: 2287181, 11: 2287181, 11418: 2317103, 11420: 2326123, 11421: 2326501}
[2026-03-03 23:13:36] 2026-03-03 22:05:23,897 | INFO     | --------------------------------------------------
[2026-03-03 23:13:36] 2026-03-03 22:05:23,897 | INFO     | 
[2026-03-03 23:13:36] 2026-03-03 22:05:23,897 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-03-03 23:13:36] 2026-03-03 22:05:23,931 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,933 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 23:13:36] 2026-03-03 22:05:23,934 | INFO     | job 7036121874 has completed (purged errors)
[2026-03-03 23:13:36] 2026-03-03 22:05:23,934 | INFO     | overall cleanup function is called
[2026-03-03 23:13:36] 2026-03-03 22:05:23,957 | INFO     | PID=226803 has CPU usage=22.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 23:13:36] 2026-03-03 22:05:23,957 | INFO     | .. there are 16 such processes running
[2026-03-03 23:13:36] 2026-03-03 22:05:24,944 | INFO     | --- collectZombieJob: --- 10, [256702]
[2026-03-03 23:13:36] 2026-03-03 22:05:24,945 | INFO     | zombie collector waiting for pid 256702
[2026-03-03 23:13:36] 2026-03-03 22:05:24,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 23:13:36] 2026-03-03 22:05:24,945 | INFO     | collected zombie processes
[2026-03-03 23:13:36] 2026-03-03 22:05:24,945 | INFO     | will attempt to kill all subprocesses of pid=256702
[2026-03-03 23:13:36] 2026-03-03 22:05:25,675 | INFO     | process IDs to be killed: [256702] (in reverse order)
[2026-03-03 23:13:36] 2026-03-03 22:05:25,924 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 23:13:36] 2026-03-03 22:05:25,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 23:13:36] 2026-03-03 22:05:25,954 | INFO     | did not find any defunct processes belonging to 256702
[2026-03-03 23:13:36] 2026-03-03 22:05:25,983 | INFO     | did not find any defunct processes belonging to 256702
[2026-03-03 23:13:36] 2026-03-03 22:05:25,983 | INFO     | ready for new job
[2026-03-03 23:13:36] 2026-03-03 22:05:25,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 23:13:36] 2026-03-03 22:05:25,986 | INFO     | **************************************
[2026-03-03 23:13:36] 2026-03-03 22:05:25,986 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 23:13:36] 2026-03-03 22:05:25,986 | INFO     | **************************************
[2026-03-03 23:13:36] 2026-03-03 22:05:25,986 | INFO     | 
[2026-03-03 23:13:36] 2026-03-03 22:05:25,994 | INFO     | architecture information:
[2026-03-03 23:13:36] 2026-03-03 22:05:25,994 | INFO     | executing command: cat /etc/os-release
[2026-03-03 23:13:36] 2026-03-03 22:05:26,019 | INFO     | cat /etc/os-release:
[2026-03-03 23:13:36] NAME="CentOS Linux"
[2026-03-03 23:13:36] VERSION="7 (Core)"
[2026-03-03 23:13:36] ID="centos"
[2026-03-03 23:13:36] ID_LIKE="rhel fedora"
[2026-03-03 23:13:36] VERSION_ID="7"
[2026-03-03 23:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 23:13:36] ANSI_COLOR="0;31"
[2026-03-03 23:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 23:13:36] HOME_URL="https://www.centos.org/"
[2026-03-03 23:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 23:13:36] 
[2026-03-03 23:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 23:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 23:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 23:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 23:13:36] 
[2026-03-03 23:13:36] 2026-03-03 22:05:26,019 | INFO     | **************************************
[2026-03-03 23:13:36] 2026-03-03 22:05:26,522 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-03-03 23:13:36] 2026-03-03 22:05:26,541 | INFO     | sufficient remaining disk space (3321516523520 B)
[2026-03-03 23:13:36] 2026-03-03 22:05:26,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 23:13:36] 2026-03-03 22:05:26,541 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 23:13:36] 2026-03-03 22:05:26,541 | INFO     | update_server=False
[2026-03-03 23:13:36] 2026-03-03 22:05:26,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 23:13:36] 2026-03-03 22:05:26,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 23:13:36] 2026-03-03 22:05:26,542 | INFO     | aborting loop
[2026-03-03 23:13:36] 2026-03-03 22:05:27,338 | INFO     | all data control threads have been joined
[2026-03-03 23:13:36] 2026-03-03 22:05:27,519 | INFO     | all payload control threads have been joined
[2026-03-03 23:13:36] 2026-03-03 22:05:27,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 23:13:36] 2026-03-03 22:05:27,547 | INFO     | [job] retrieve thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:27,548 | INFO     | [job] job monitor thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:27,726 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:27,845 | INFO     | all job control threads have been joined
[2026-03-03 23:13:36] 2026-03-03 22:05:27,911 | INFO     | [payload] failed_post thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:27,912 | INFO     | [job] validate thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:27,984 | INFO     | [payload] validate_post thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:28,052 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:28,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:28,340 | INFO     | [data] control thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:28,524 | INFO     | [payload] control thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:28,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 23:13:36] 2026-03-03 22:05:28,643 | INFO     | [data] copytool_in thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:28,850 | INFO     | [job] control thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:29,000 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:29,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 23:13:36] 2026-03-03 22:05:29,552 | INFO     | [data] copytool_out thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:29,609 | INFO     | [job] queue monitor thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:33,459 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 23:13:36] 2026-03-03 22:05:56,894 | INFO     | PID=226803 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 23:13:36] 2026-03-03 22:05:56,894 | INFO     | .. there are 16 such processes running
[2026-03-03 23:13:36] 2026-03-03 22:05:56,894 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 23:13:36] 2026-03-03 22:05:56,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 23:13:36] 2026-03-03 22:05:56,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 23:13:36] 2026-03-03 22:06:08,413 | INFO     | [monitor] cgroup control has ended
[2026-03-03 23:13:36] 2026-03-03 22:06:09,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22653176833856)>', '<ExcThread(monitor, started 22652938106624)>']
[2026-03-03 23:13:36] 2026-03-03 22:06:09,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 23:13:36] 2026-03-03 22:06:09,960 | INFO     | [monitor] control thread has ended
[2026-03-03 23:13:36] 2026-03-03 22:06:14,602 | INFO     | all workflow threads have been joined
[2026-03-03 23:13:36] 2026-03-03 22:06:14,603 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 23:13:36] 2026-03-03 22:06:14,603 | INFO     | traces error code: 0
[2026-03-03 23:13:36] 2026-03-03 22:06:14,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 23:13:36] 2026-03-03 22:06:14,744 [wrapper] ==== pilot stdout END ====
[2026-03-03 23:13:36] 2026-03-03 22:06:14,748 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 23:13:36] 2026-03-03 22:06:14,753 [wrapper] pilotpid: 226803
[2026-03-03 23:13:36] 2026-03-03 22:06:14,757 [wrapper] Pilot exit status: 0
[2026-03-03 23:13:36] 2026-03-03 22:06:14,773 [wrapper] pandaids: 7036121874
[2026-03-03 23:13:36] 2026-03-03 22:06:14,951 [wrapper] cleanup supervisor_pilot  516894 226804
[2026-03-03 23:13:36] 2026-03-03 22:06:14,955 [wrapper] Test setup, not cleaning
[2026-03-03 23:13:36] 2026-03-03 22:06:14,959 [wrapper] apfmon messages muted
[2026-03-03 23:13:36] 2026-03-03 22:06:14,963 [wrapper] ==== wrapper stdout END ====
[2026-03-03 23:13:36] 2026-03-03 22:06:14,967 [wrapper] ==== wrapper stderr END ====
[2026-03-03 23:13:36]  *** Error codes and diagnostics ***
[2026-03-03 23:13:36]     "exeErrorCode": 0,
[2026-03-03 23:13:36]     "exeErrorDiag": "",
[2026-03-03 23:13:36]     "pilotErrorCode": 0,
[2026-03-03 23:13:36]     "pilotErrorDiag": "",
[2026-03-03 23:13:36]  *** Listing of results directory ***
[2026-03-03 23:13:36] total 488864
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc    584627 Mar  2 20:44 pilot3.tar.gz
[2026-03-03 23:13:36] -rwx------ 1 boinc boinc     36322 Mar  2 21:00 runpilot2-wrapper.sh
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc      5111 Mar  2 21:00 queuedata.json
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc       100 Mar  3 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 23:13:36] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 19:54 run_atlas
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc       105 Mar  3 19:54 job.xml
[2026-03-03 23:13:36] -rw-r--r-- 2 boinc boinc 281230782 Mar  3 19:54 EVNT.48455987._000003.pool.root.1
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc      6699 Mar  3 19:54 init_data.xml
[2026-03-03 23:13:36] -rw-r--r-- 2 boinc boinc     15845 Mar  3 19:54 start_atlas.sh
[2026-03-03 23:13:36] drwxrwx--x 2 boinc boinc      4096 Mar  3 19:54 shared
[2026-03-03 23:13:36] -rw-r--r-- 2 boinc boinc    597977 Mar  3 19:54 input.tar.gz
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc         0 Mar  3 19:54 boinc_lockfile
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc      2619 Mar  3 19:54 pandaJob.out
[2026-03-03 23:13:36] -rw------- 1 boinc boinc    998492 Mar  3 19:54 agis_schedconf.cvmfs.json
[2026-03-03 23:13:36] -rw------- 1 boinc boinc       443 Mar  3 19:54 workernode_map.json
[2026-03-03 23:13:36] drwx------ 5 boinc boinc      4096 Mar  3 19:54 pilot3
[2026-03-03 23:13:36] -rw------- 1 boinc boinc 211531181 Mar  3 23:04 HITS.48848682._000056.pool.root.1
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc       528 Mar  3 23:04 boinc_task_state.xml
[2026-03-03 23:13:36] -rw------- 1 boinc boinc        95 Mar  3 23:05 pilot_heartbeat.json
[2026-03-03 23:13:36] -rw------- 1 boinc boinc      1025 Mar  3 23:05 memory_monitor_summary.json
[2026-03-03 23:13:36] -rw------- 1 boinc boinc   1516092 Mar  3 23:05 agis_ddmendpoints.agis.ALL.json
[2026-03-03 23:13:36] -rw------- 1 boinc boinc    353285 Mar  3 23:05 log.48848682._000056.job.log.tgz.1
[2026-03-03 23:13:36] -rw------- 1 boinc boinc      6339 Mar  3 23:05 heartbeat.json
[2026-03-03 23:13:36] -rw------- 1 boinc boinc      4830 Mar  3 23:06 pilotlog.txt
[2026-03-03 23:13:36] -rw------- 1 boinc boinc   1598687 Mar  3 23:06 log.48848682._000056.job.log.1
[2026-03-03 23:13:36] -rw------- 1 boinc boinc       357 Mar  3 23:06 output.list
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc       620 Mar  3 23:06 runtime_log
[2026-03-03 23:13:36] -rw------- 1 boinc boinc   1966080 Mar  3 23:06 result.tar.gz
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc      9205 Mar  3 23:06 runtime_log.err
[2026-03-03 23:13:36] -rw------- 1 boinc boinc       666 Mar  3 23:06 0LTNDm5bOH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmElELDmXcQ6Gm.diag
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc        26 Mar  3 23:13 wrapper_checkpoint.txt
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc      8192 Mar  3 23:13 boinc_mmap_file
[2026-03-03 23:13:36] -rw-r--r-- 1 boinc boinc     21225 Mar  3 23:13 stderr.txt
[2026-03-03 23:13:36] HITS file was successfully produced:
[2026-03-03 23:13:36] -rw------- 1 boinc boinc 211531181 Mar  3 23:04 shared/HITS.pool.root.1
[2026-03-03 23:13:36]  *** Contents of shared directory: ***
[2026-03-03 23:13:36] total 483744
[2026-03-03 23:13:36] -rw-r--r-- 2 boinc boinc 281230782 Mar  3 19:54 ATLAS.root_0
[2026-03-03 23:13:36] -rw-r--r-- 2 boinc boinc     15845 Mar  3 19:54 start_atlas.sh
[2026-03-03 23:13:36] -rw-r--r-- 2 boinc boinc    597977 Mar  3 19:54 input.tar.gz
[2026-03-03 23:13:36] -rw------- 1 boinc boinc 211531181 Mar  3 23:04 HITS.pool.root.1
[2026-03-03 23:13:36] -rw------- 1 boinc boinc   1966080 Mar  3 23:06 result.tar.gz
23:13:37 (208489): run_atlas exited; CPU time 44745.158924
23:13:37 (208489): called boinc_finish(0)

</stderr_txt>
]]>

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