Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-03 07:06:36 (3785): vboxwrapper version 26210
2026-03-03 07:06:36 (3785): BOINC client version: 8.2.8
2026-03-03 07:06:36 (3785): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2026-03-03 07:06:36 (3785): Detected: Sandbox Configuration Enabled
2026-03-03 07:06:36 (3785): Successfully copied 'init_data.xml' to the shared directory.
2026-03-03 07:06:36 (3785): Create VM. (boinc_78c5dc651ad94289, slot#0)
2026-03-03 07:06:37 (3785): Setting Memory Size for VM. (4800MB)
2026-03-03 07:06:37 (3785): Setting CPU Count for VM. (8)
2026-03-03 07:06:37 (3785): Setting Chipset Options for VM.
2026-03-03 07:06:37 (3785): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-03 07:06:37 (3785): Setting Boot Options for VM.
2026-03-03 07:06:38 (3785): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-03 07:06:38 (3785): Enabling VM Network Access.
2026-03-03 07:06:38 (3785): Disabling USB Support for VM.
2026-03-03 07:06:38 (3785): Disabling COM Port Support for VM.
2026-03-03 07:06:38 (3785): Disabling Audio Support for VM.
2026-03-03 07:06:39 (3785): Disabling Clipboard Support for VM.
2026-03-03 07:06:39 (3785): Disabling Drag and Drop Support for VM.
2026-03-03 07:06:39 (3785): Adding storage controller(s) to VM.
2026-03-03 07:06:39 (3785): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-03 07:06:41 (3785): Adding VirtualBox Guest Additions to VM.
2026-03-03 07:06:41 (3785): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-03 07:06:41 (3785): forwarding host port 52380 to guest port 80
2026-03-03 07:06:41 (3785): Enabling remote desktop for VM.
2026-03-03 07:06:41 (3785): Required extension pack not installed, remote desktop not enabled.
2026-03-03 07:06:41 (3785): Enabling shared directory for VM.
2026-03-03 07:06:41 (3785): Starting VM using VBoxManage interface. (boinc_78c5dc651ad94289, slot#0)
2026-03-03 07:06:48 (3785): Successfully started VM. (PID = '3861')
2026-03-03 07:06:48 (3785): Reporting VM Process ID to BOINC.
2026-03-03 07:06:48 (3785): Guest Log: BIOS: VirtualBox 7.0.20
2026-03-03 07:06:48 (3785): Guest Log: CPUID EDX: 0x178bfbff
2026-03-03 07:06:48 (3785): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-03 07:06:48 (3785): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-03 07:06:48 (3785): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-03 07:06:48 (3785): Detected: Web Application Enabled (http://localhost:52380)
2026-03-03 07:06:48 (3785): Preference change detected
2026-03-03 07:06:48 (3785): Setting CPU throttle for VM. (100%)
2026-03-03 07:06:48 (3785): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-03 07:06:50 (3785): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-03 07:06:50 (3785): Guest Log: BIOS: Booting from Hard Disk...
2026-03-03 07:06:54 (3785): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-03 07:06:54 (3785): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-03 07:06:54 (3785): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-03 07:07:02 (3785): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-03 07:07:02 (3785): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-03 07:07:14 (3785): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.000255 main     Log opened 2026-03-03T12:07:13.088857000Z
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.000408 main     OS Product: Linux
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.000487 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.000532 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.000587 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.000588 main     Process ID: 1371
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.000589 main     Package type: LINUX_64BITS_GENERIC
2026-03-03 07:07:14 (3785): Guest Log: 00:00:00.003288 main     5.2.32 r132073 started. Verbose level = 0
2026-03-03 07:07:15 (3785): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-03 07:07:15 (3785): Guest Log: [INFO] Mounting shared directory
2026-03-03 07:07:15 (3785): Guest Log: [INFO] Checking for init_data.xml
2026-03-03 07:07:27 (3785): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-03 07:07:27 (3785): Guest Log: [INFO] Detected branch: prod
2026-03-03 07:07:28 (3785): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-03 07:07:28 (3785): Guest Log: Copying input files
2026-03-03 07:07:31 (3785): Guest Log: Copied input files into RunAtlas.
2026-03-03 07:07:31 (3785): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-03 07:07:31 (3785): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-03 07:07:31 (3785): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-03 07:07:31 (3785): Guest Log: Further information can be found at the LHC@home message board.
2026-03-03 07:07:42 (3785): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-03 07:07:42 (3785): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-03 07:07:42 (3785): Guest Log: 2.6.3.0 1652 0 32200 156844 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-03 07:07:43 (3785): Guest Log: copied the webapp to /var/www
2026-03-03 07:07:43 (3785): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-03 07:07:43 (3785): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-03 07:07:44 (3785): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-03 07:07:44 (3785): Guest Log:  *** Starting ATLAS job. (PandaID=7036160633 taskID=48852144) ***
2026-03-03 08:46:48 (3785): Status Report: Elapsed Time: '6000.000000'
2026-03-03 08:46:48 (3785): Status Report: CPU Time: '33507.770000'
2026-03-03 10:26:48 (3785): Status Report: Elapsed Time: '12000.000000'
2026-03-03 10:26:48 (3785): Status Report: CPU Time: '72939.150000'
2026-03-03 12:06:48 (3785): Status Report: Elapsed Time: '18000.000000'
2026-03-03 12:06:48 (3785): Status Report: CPU Time: '112764.290000'
2026-03-03 13:43:49 (3785): Guest Log:  *** Job finished ***
2026-03-03 13:43:49 (3785): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:10,688 | INFO     | [monitor] cgroup control has ended
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:12,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291490535232)>', '<ExcThread(monitor, started 140290593642240)>']
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:12,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:12,774 | INFO     | [monitor] control thread has ended
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:17,507 | INFO     | all workflow threads have been joined
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:17,508 | INFO     | end of generic workflow (traces error code: 0)
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:17,509 | INFO     | traces error code: 0
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:17,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:18,178 [wrapper] ==== pilot stdout END ====
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:18,235 [wrapper] ==== wrapper stdout RESUME ====
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:18,265 [wrapper] pilotpid: 6110
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:40:18,296 [wrapper] Pilot exit status: 0
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:41:03,568 [wrapper] supervise_pilot (15 min periods counter: 27)
2026-03-03 13:43:49 (3785): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:43:47,824 [wrapper] pandaids: 
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:43:48,044 [wrapper] cleanup supervisor_pilot 31575 6111
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:43:48,089 [wrapper] Test setup, not cleaning
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:43:48,126 [wrapper] apfmon messages muted
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:43:48,143 [wrapper] ==== wrapper stdout END ====
2026-03-03 13:43:49 (3785): Guest Log: 2026-03-03 18:43:48,176 [wrapper] ==== wrapper stderr END ====
2026-03-03 13:43:49 (3785): Guest Log:  *** Error codes and diagnostics ***
2026-03-03 13:43:49 (3785): Guest Log:     "exeErrorCode": 68,
2026-03-03 13:43:49 (3785): Guest Log:     "exeErrorDiag": "Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc::::ExcNoDictForClass: Can't find dictionary information for class: EventStreamInfo_p1\"\"",
2026-03-03 13:43:49 (3785): Guest Log:     "pilotErrorCode": 1305,
2026-03-03 13:43:49 (3785): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformLogfileErrorException: Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc:",
2026-03-03 13:43:49 (3785): Guest Log:  *** Listing of results directory ***
2026-03-03 13:43:49 (3785): Guest Log: total 9408
2026-03-03 13:43:49 (3785): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Mar  3 00:05 pilot3.tar.gz
2026-03-03 13:43:49 (3785): Guest Log: -rwx------. 1 atlas atlas   36322 Mar  3 00:07 runpilot2-wrapper.sh
2026-03-03 13:43:49 (3785): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar  3 00:08 queuedata.json
2026-03-03 13:43:49 (3785): Guest Log: -rw-r-----. 1 atlas atlas   15845 Mar  3 12:07 start_atlas.sh
2026-03-03 13:43:49 (3785): Guest Log: -rw-r-----. 1 atlas atlas  597971 Mar  3 12:07 input.tar.gz
2026-03-03 13:43:49 (3785): Guest Log: -rw-r--r--. 1 atlas atlas    5655 Mar  3 12:07 init_data.xml
2026-03-03 13:43:49 (3785): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar  3 12:07 EVNT.48461916._000003.pool.root.1 -> /data/./ATLAS.root_0
2026-03-03 13:43:49 (3785): Guest Log: -rw-r--r--. 1 atlas atlas    2621 Mar  3 12:07 pandaJob.out
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas  998442 Mar  3 12:10 agis_schedconf.cvmfs.json
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas     427 Mar  3 12:10 workernode_map.json
2026-03-03 13:43:49 (3785): Guest Log: drwx------. 5 atlas atlas    4096 Mar  3 12:10 pilot3
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas    1036 Mar  3 18:23 memory_monitor_summary.json
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas  563793 Mar  3 18:27 log.48852144._000058.job.log.tgz.1
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas       0 Mar  3 18:31 agis_ddmendpoints.agis.ALL.json
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas      95 Mar  3 18:39 pilot_heartbeat.json
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas    8865 Mar  3 18:39 heartbeat.json
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas    4801 Mar  3 18:40 pilotlog.txt
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas 3077199 Mar  3 18:43 log.48852144._000058.job.log.1
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas     188 Mar  3 18:43 output.list
2026-03-03 13:43:49 (3785): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar  3 18:43 runtime_log
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas 3665920 Mar  3 18:43 result.tar.gz
2026-03-03 13:43:49 (3785): Guest Log: -rw-------. 1 atlas atlas     684 Mar  3 18:43 t7sLDmLTSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdJFLDmx6Ikam.diag
2026-03-03 13:43:49 (3785): Guest Log: -rw-r--r--. 1 atlas atlas    8669 Mar  3 18:43 runtime_log.err
2026-03-03 13:43:49 (3785): Guest Log: Looking for outputfile HITS.48852144._000058.pool.root.1
2026-03-03 13:43:49 (3785): Guest Log: No HITS file was produced
2026-03-03 13:43:49 (3785): Guest Log: Successfully finished the ATLAS job!
2026-03-03 13:43:49 (3785): Guest Log: Copying the results back to the shared directory!
2026-03-03 13:43:50 (3785): Guest Log:  *** Contents of shared directory: ***
2026-03-03 13:43:50 (3785): Guest Log: total 265608
2026-03-03 13:43:50 (3785): Guest Log: -rw-rw----. 1 root root 267692495 Mar  3 12:06 ATLAS.root_0
2026-03-03 13:43:50 (3785): Guest Log: -rw-rw-r--. 1 root root      5655 Mar  3 12:06 init_data.xml
2026-03-03 13:43:50 (3785): Guest Log: -rw-rw----. 1 root root    597971 Mar  3 12:06 input.tar.gz
2026-03-03 13:43:50 (3785): Guest Log: -rw-r--r--. 1 root root   3665920 Mar  3 18:43 result.tar.gz
2026-03-03 13:43:50 (3785): Guest Log: -rw-rw----. 1 root root     15845 Mar  3 12:06 start_atlas.sh
2026-03-03 13:43:50 (3785): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-03 13:43:50 (3785): VM Completion File Detected.
2026-03-03 13:43:50 (3785): Powering off VM.
2026-03-03 13:43:51 (3785): Successfully stopped VM.
2026-03-03 13:43:51 (3785): Deregistering VM. (boinc_78c5dc651ad94289, slot#0)
2026-03-03 13:43:51 (3785): Removing network bandwidth throttle group from VM.
2026-03-03 13:43:52 (3785): Removing VM from VirtualBox.
2026-03-03 13:43:57 (3785): called boinc_finish(0)

</stderr_txt>
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