Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:40:40 (3515): wrapper (7.7.26015): starting
23:40:40 (3515): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 23:40:40] Arguments: --nthreads 8
[2026-03-02 23:40:40] Threads: 8
[2026-03-02 23:40:40] Checking for CVMFS
[2026-03-02 23:40:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 23:40:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 23:40:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 23:40:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 23:40:41] 2.11.2.0 2795 186629 79496 156832 1 49 10287561 20275201 1 130560 0 43616888 99.815 12828653 27404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-02 23:40:41] CVMFS is ok
[2026-03-02 23:40:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 23:40:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 23:40:41] Further information can be found at the LHC@home message board.
[2026-03-02 23:40:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 23:40:41] Checking for apptainer binary...
[2026-03-02 23:40:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 23:40:41] Running /usr/bin/apptainer --version
[2026-03-02 23:40:41] apptainer version 1.3.2-1.el7
[2026-03-02 23:40:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 23:40:43] c-204-18.aglt2.org
[2026-03-02 23:40:43] apptainer works
[2026-03-02 23:40:43] Set ATHENA_PROC_NUMBER=8
[2026-03-02 23:40:43] Set ATHENA_CORE_NUMBER=8
[2026-03-02 23:40:43] Starting ATLAS job with PandaID=7036175568
[2026-03-02 23:40:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 02:19:29]  *** The last 200 lines of the pilot log: ***
[2026-03-03 02:19:29] 2026-03-03 07:18:49,692 | WARNING  | process 12052 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 02:19:29] 2026-03-03 07:18:49,695 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036175568/jobReport.json
[2026-03-03 02:19:29] 2026-03-03 07:18:49,695 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036175568/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,699 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 02:19:29] 2026-03-03 07:18:49,700 | INFO     | this job has now completed (state=finished)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,700 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,700 | INFO     | log transfer has been attempted: DONE
[2026-03-03 02:19:29] 2026-03-03 07:18:49,701 | INFO     | job 7036175568 has finished - writing final server update
[2026-03-03 02:19:29] 2026-03-03 07:18:49,701 | INFO     | total number of processed events: 400 (read)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,704 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036175568/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,704 | INFO     | extracted standard info from prmon json
[2026-03-03 02:19:29] 2026-03-03 07:18:49,705 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 02:19:29] 2026-03-03 07:18:49,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 02:19:29] 2026-03-03 07:18:49,705 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 02:19:29] 2026-03-03 07:18:49,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 02:19:29] 2026-03-03 07:18:49,709 | INFO     | fitting pss+swap vs Time
[2026-03-03 02:19:29] 2026-03-03 07:18:49,710 | INFO     | sum of square deviations: 1154663510.0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,711 | INFO     | sum of deviations: 8820343372.999996
[2026-03-03 02:19:29] 2026-03-03 07:18:49,711 | INFO     | mean x: 1772517591.0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,711 | INFO     | mean y: 2523339.4064516127
[2026-03-03 02:19:29] 2026-03-03 07:18:49,711 | INFO     | intersect: -13537537164.716318
[2026-03-03 02:19:29] 2026-03-03 07:18:49,712 | INFO     | chi2: 1.7307947462767341
[2026-03-03 02:19:29] 2026-03-03 07:18:49,712 | INFO     | sum of square deviations: 1046484737.5
[2026-03-03 02:19:29] 2026-03-03 07:18:49,713 | INFO     | sum of deviations: 8577229214.999999
[2026-03-03 02:19:29] 2026-03-03 07:18:49,713 | INFO     | mean x: 1772517438.5
[2026-03-03 02:19:29] 2026-03-03 07:18:49,713 | INFO     | mean y: 2522996.6133333333
[2026-03-03 02:19:29] 2026-03-03 07:18:49,714 | INFO     | intersect: -14525436956.170177
[2026-03-03 02:19:29] 2026-03-03 07:18:49,714 | INFO     | chi2: 1.7324248762632577
[2026-03-03 02:19:29] 2026-03-03 07:18:49,714 | INFO     | current chi2=1.7324248762632577 (change=-0.09418389962358518 %)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,714 | INFO     | right removable region: 149
[2026-03-03 02:19:29] 2026-03-03 07:18:49,715 | INFO     | sum of square deviations: 1046484737.5
[2026-03-03 02:19:29] 2026-03-03 07:18:49,716 | INFO     | sum of deviations: -17024087400.000002
[2026-03-03 02:19:29] 2026-03-03 07:18:49,716 | INFO     | mean x: 1772517743.5
[2026-03-03 02:19:29] 2026-03-03 07:18:49,716 | INFO     | mean y: 2559304.8
[2026-03-03 02:19:29] 2026-03-03 07:18:49,716 | INFO     | intersect: 28837664014.958073
[2026-03-03 02:19:29] 2026-03-03 07:18:49,717 | INFO     | chi2: 0.15306164715047252
[2026-03-03 02:19:29] 2026-03-03 07:18:49,717 | INFO     | current chi2=0.15306164715047252 (change=91.1565685370991 %)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,717 | INFO     | sum of square deviations: 945282840.0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,718 | INFO     | sum of deviations: -17235224992.0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,718 | INFO     | mean x: 1772517896.0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,718 | INFO     | mean y: 2559534.5103448275
[2026-03-03 02:19:29] 2026-03-03 07:18:49,718 | INFO     | intersect: 32320658887.616615
[2026-03-03 02:19:29] 2026-03-03 07:18:49,719 | INFO     | chi2: 0.1298882462160351
[2026-03-03 02:19:29] 2026-03-03 07:18:49,719 | INFO     | current chi2=0.1298882462160351 (change=15.139913470064789 %)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,719 | INFO     | left removable region: 20
[2026-03-03 02:19:29] 2026-03-03 07:18:49,719 | INFO     | sum of square deviations: 665612480.0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,720 | INFO     | sum of deviations: -7174563800.000001
[2026-03-03 02:19:29] 2026-03-03 07:18:49,720 | INFO     | mean x: 1772518018.0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,720 | INFO     | mean y: 2543461.3333333335
[2026-03-03 02:19:29] 2026-03-03 07:18:49,720 | INFO     | intersect: 19108320454.56301
[2026-03-03 02:19:29] 2026-03-03 07:18:49,721 | INFO     | chi2: 0.08799554323520285
[2026-03-03 02:19:29] 2026-03-03 07:18:49,721 | INFO     | current memory leak: -10.78 B/s (using 129 data points, chi2=0.09)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,721 | INFO     | could have reported an average CPU frequency of 1679 MHz (9 samples)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,722 | INFO     | ..............................
[2026-03-03 02:19:29] 2026-03-03 07:18:49,722 | INFO     | . Timing measurements:
[2026-03-03 02:19:29] 2026-03-03 07:18:49,722 | INFO     | . get job = 0 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,722 | INFO     | . initial setup = 8 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,722 | INFO     | . payload setup = 8 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,723 | INFO     | . stage-in = 0 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,723 | INFO     | . payload execution = 9432 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,723 | INFO     | . stage-out = 0 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,723 | INFO     | . log creation = 0 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,723 | INFO     | ..............................
[2026-03-03 02:19:29] 2026-03-03 07:18:49,813 | INFO     | 
[2026-03-03 02:19:29] 2026-03-03 07:18:49,813 | INFO     | job summary report
[2026-03-03 02:19:29] 2026-03-03 07:18:49,814 | INFO     | --------------------------------------------------
[2026-03-03 02:19:29] 2026-03-03 07:18:49,814 | INFO     | PanDA job id: 7036175568
[2026-03-03 02:19:29] 2026-03-03 07:18:49,814 | INFO     | task id: 48851556
[2026-03-03 02:19:29] 2026-03-03 07:18:49,814 | INFO     | errors: (none)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,815 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 02:19:29] 2026-03-03 07:18:49,815 | INFO     | pilot state: finished 
[2026-03-03 02:19:29] 2026-03-03 07:18:49,815 | INFO     | transexitcode: 0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,816 | INFO     | exeerrorcode: 0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,816 | INFO     | exeerrordiag: 
[2026-03-03 02:19:29] 2026-03-03 07:18:49,816 | INFO     | exitcode: 0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,816 | INFO     | exitmsg: OK
[2026-03-03 02:19:29] 2026-03-03 07:18:49,817 | INFO     | cpuconsumptiontime: 70862 s
[2026-03-03 02:19:29] 2026-03-03 07:18:49,817 | INFO     | nevents: 400
[2026-03-03 02:19:29] 2026-03-03 07:18:49,817 | INFO     | neventsw: 0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,818 | INFO     | pid: 12052
[2026-03-03 02:19:29] 2026-03-03 07:18:49,818 | INFO     | pgrp: 12052
[2026-03-03 02:19:29] 2026-03-03 07:18:49,818 | INFO     | corecount: 8
[2026-03-03 02:19:29] 2026-03-03 07:18:49,819 | INFO     | event service: False
[2026-03-03 02:19:29] 2026-03-03 07:18:49,819 | INFO     | sizes: {0: 2282349, 11: 2282349, 9444: 2310759, 9445: 2310758, 9447: 2319812, 9450: 2320254}
[2026-03-03 02:19:29] 2026-03-03 07:18:49,819 | INFO     | --------------------------------------------------
[2026-03-03 02:19:29] 2026-03-03 07:18:49,819 | INFO     | 
[2026-03-03 02:19:29] 2026-03-03 07:18:49,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 02:19:29] 2026-03-03 07:18:49,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,841 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,841 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,841 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,844 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 02:19:29] 2026-03-03 07:18:49,844 | INFO     | job 7036175568 has completed (purged errors)
[2026-03-03 02:19:29] 2026-03-03 07:18:49,844 | INFO     | overall cleanup function is called
[2026-03-03 02:19:29] 2026-03-03 07:18:49,917 | INFO     | number of running child processes to parent process 12052: 1
[2026-03-03 02:19:29] 2026-03-03 07:18:49,918 | INFO     | maximum number of monitored processes: 6
[2026-03-03 02:19:29] 2026-03-03 07:18:49,918 | INFO     | aborting job monitoring since job object (job id=7036175568) has expired
[2026-03-03 02:19:29] 2026-03-03 07:18:50,849 | INFO     | --- collectZombieJob: --- 10, [12052]
[2026-03-03 02:19:29] 2026-03-03 07:18:50,849 | INFO     | zombie collector waiting for pid 12052
[2026-03-03 02:19:29] 2026-03-03 07:18:50,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 02:19:29] 2026-03-03 07:18:50,850 | INFO     | collected zombie processes
[2026-03-03 02:19:29] 2026-03-03 07:18:50,850 | INFO     | will attempt to kill all subprocesses of pid=12052
[2026-03-03 02:19:29] 2026-03-03 07:18:50,934 | INFO     | process IDs to be killed: [12052] (in reverse order)
[2026-03-03 02:19:29] 2026-03-03 07:18:50,993 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 02:19:29] 2026-03-03 07:18:50,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 02:19:29] 2026-03-03 07:18:50,996 | INFO     | did not find any defunct processes belonging to 12052
[2026-03-03 02:19:29] 2026-03-03 07:18:50,999 | INFO     | did not find any defunct processes belonging to 12052
[2026-03-03 02:19:29] 2026-03-03 07:18:50,999 | INFO     | ready for new job
[2026-03-03 02:19:29] 2026-03-03 07:18:50,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 02:19:29] 2026-03-03 07:18:51,001 | INFO     | **************************************
[2026-03-03 02:19:29] 2026-03-03 07:18:51,001 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 02:19:29] 2026-03-03 07:18:51,001 | INFO     | **************************************
[2026-03-03 02:19:29] 2026-03-03 07:18:51,001 | INFO     | 
[2026-03-03 02:19:29] 2026-03-03 07:18:51,002 | INFO     | architecture information:
[2026-03-03 02:19:29] 2026-03-03 07:18:51,002 | INFO     | executing command: cat /etc/os-release
[2026-03-03 02:19:29] 2026-03-03 07:18:51,020 | INFO     | cat /etc/os-release:
[2026-03-03 02:19:29] NAME="CentOS Linux"
[2026-03-03 02:19:29] VERSION="7 (Core)"
[2026-03-03 02:19:29] ID="centos"
[2026-03-03 02:19:29] ID_LIKE="rhel fedora"
[2026-03-03 02:19:29] VERSION_ID="7"
[2026-03-03 02:19:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 02:19:29] ANSI_COLOR="0;31"
[2026-03-03 02:19:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 02:19:29] HOME_URL="https://www.centos.org/"
[2026-03-03 02:19:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 02:19:29] 
[2026-03-03 02:19:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 02:19:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 02:19:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 02:19:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 02:19:29] 
[2026-03-03 02:19:29] 2026-03-03 07:18:51,021 | INFO     | **************************************
[2026-03-03 02:19:29] 2026-03-03 07:18:51,522 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 02:19:29] 2026-03-03 07:18:51,541 | INFO     | sufficient remaining disk space (18453889024 B)
[2026-03-03 02:19:29] 2026-03-03 07:18:51,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 02:19:29] 2026-03-03 07:18:51,542 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 02:19:29] 2026-03-03 07:18:51,542 | INFO     | update_server=False
[2026-03-03 02:19:29] 2026-03-03 07:18:51,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 02:19:29] 2026-03-03 07:18:51,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:19:29] 2026-03-03 07:18:51,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 02:19:29] 2026-03-03 07:18:51,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:19:29] 2026-03-03 07:18:51,544 | INFO     | aborting loop
[2026-03-03 02:19:29] 2026-03-03 07:18:51,934 | INFO     | all payload control threads have been joined
[2026-03-03 02:19:29] 2026-03-03 07:18:51,992 | INFO     | all data control threads have been joined
[2026-03-03 02:19:29] 2026-03-03 07:18:52,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 02:19:29] 2026-03-03 07:18:52,548 | INFO     | [job] retrieve thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:52,548 | INFO     | [job] queue monitor thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:52,549 | INFO     | [job] job monitor thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:52,571 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:52,940 | INFO     | [payload] control thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:52,998 | INFO     | [data] control thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:53,030 | INFO     | all job control threads have been joined
[2026-03-03 02:19:29] 2026-03-03 07:18:53,033 | INFO     | [data] copytool_in thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:53,160 | INFO     | [payload] failed_post thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:53,306 | INFO     | [job] validate thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:53,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:53,801 | INFO     | [payload] validate_post thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:53,823 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:53,856 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:54,035 | INFO     | [job] control thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:54,410 | INFO     | [data] copytool_out thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:18:55,548 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 02:19:29] 2026-03-03 07:19:22,504 | INFO     | PID=7543 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-03 02:19:29] 2026-03-03 07:19:22,505 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 02:19:29] 2026-03-03 07:19:22,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 02:19:29] 2026-03-03 07:19:22,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 02:19:29] 2026-03-03 07:19:23,182 | INFO     | [monitor] cgroup control has ended
[2026-03-03 02:19:29] 2026-03-03 07:19:24,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699201607488)>', '<ExcThread(monitor, started 139698760570624)>']
[2026-03-03 02:19:29] 2026-03-03 07:19:24,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 02:19:29] 2026-03-03 07:19:24,516 | INFO     | [monitor] control thread has ended
[2026-03-03 02:19:29] 2026-03-03 07:19:29,221 | INFO     | all workflow threads have been joined
[2026-03-03 02:19:29] 2026-03-03 07:19:29,221 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 02:19:29] 2026-03-03 07:19:29,222 | INFO     | traces error code: 0
[2026-03-03 02:19:29] 2026-03-03 07:19:29,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 02:19:29] 2026-03-03 07:19:29,346 [wrapper] ==== pilot stdout END ====
[2026-03-03 02:19:29] 2026-03-03 07:19:29,351 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 02:19:29] 2026-03-03 07:19:29,355 [wrapper] pilotpid: 7543
[2026-03-03 02:19:29] 2026-03-03 07:19:29,360 [wrapper] Pilot exit status: 0
[2026-03-03 02:19:29] 2026-03-03 07:19:29,378 [wrapper] pandaids: 7036175568
[2026-03-03 02:19:29] 2026-03-03 07:19:29,420 [wrapper] cleanup supervisor_pilot   885 7544
[2026-03-03 02:19:29] 2026-03-03 07:19:29,426 [wrapper] Test setup, not cleaning
[2026-03-03 02:19:29] 2026-03-03 07:19:29,431 [wrapper] apfmon messages muted
[2026-03-03 02:19:29] 2026-03-03 07:19:29,435 [wrapper] ==== wrapper stdout END ====
[2026-03-03 02:19:29] 2026-03-03 07:19:29,440 [wrapper] ==== wrapper stderr END ====
[2026-03-03 02:19:29]  *** Error codes and diagnostics ***
[2026-03-03 02:19:29]     "exeErrorCode": 0,
[2026-03-03 02:19:29]     "exeErrorDiag": "",
[2026-03-03 02:19:29]     "pilotErrorCode": 0,
[2026-03-03 02:19:29]     "pilotErrorDiag": "",
[2026-03-03 02:19:29]  *** Listing of results directory ***
[2026-03-03 02:19:29] total 448448
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 19:02 queuedata.json
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 19:05 pilot3.tar.gz
[2026-03-03 02:19:29] -rwx------ 1 boincer umatlas     36322 Mar  2 19:05 runpilot2-wrapper.sh
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas       100 Mar  2 23:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 02:19:29] -rwxr-xr-x 1 boincer umatlas      7986 Mar  2 23:40 run_atlas
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas       105 Mar  2 23:40 job.xml
[2026-03-03 02:19:29] -rw-r--r-- 2 boincer umatlas 253870614 Mar  2 23:40 EVNT.48460333._000002.pool.root.1
[2026-03-03 02:19:29] -rw-r--r-- 2 boincer umatlas     15845 Mar  2 23:40 start_atlas.sh
[2026-03-03 02:19:29] drwxrwx--x 2 boincer umatlas      4096 Mar  2 23:40 shared
[2026-03-03 02:19:29] -rw-r--r-- 2 boincer umatlas    597961 Mar  2 23:40 input.tar.gz
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas         0 Mar  2 23:40 boinc_lockfile
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas      2619 Mar  2 23:40 pandaJob.out
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas        57 Mar  2 23:40 setup.sh.local
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas    997730 Mar  2 23:40 agis_schedconf.cvmfs.json
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas   1512931 Mar  2 23:41 agis_ddmendpoints.agis.ALL.json
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas       432 Mar  2 23:41 workernode_map.json
[2026-03-03 02:19:29] drwx------ 5 boincer umatlas      4096 Mar  2 23:41 pilot3
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas      5910 Mar  3 02:11 init_data.xml
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas 197963763 Mar  3 02:18 HITS.48851556._000043.pool.root.1
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas       529 Mar  3 02:18 boinc_task_state.xml
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas      1048 Mar  3 02:18 memory_monitor_summary.json
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas    400321 Mar  3 02:18 log.48851556._000043.job.log.tgz.1
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas      6388 Mar  3 02:18 heartbeat.json
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 02:19 boinc_mmap_file
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas        27 Mar  3 02:19 wrapper_checkpoint.txt
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas        95 Mar  3 02:19 pilot_heartbeat.json
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas      4741 Mar  3 02:19 pilotlog.txt
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas   1324983 Mar  3 02:19 log.48851556._000043.job.log.1
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas       357 Mar  3 02:19 output.list
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas       620 Mar  3 02:19 runtime_log
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas   1740800 Mar  3 02:19 result.tar.gz
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas       660 Mar  3 02:19 WaIMDmhRSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRDDLDmBEn7Zn.diag
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas      9341 Mar  3 02:19 runtime_log.err
[2026-03-03 02:19:29] -rw-r--r-- 1 boincer umatlas     21299 Mar  3 02:19 stderr.txt
[2026-03-03 02:19:29] HITS file was successfully produced:
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas 197963763 Mar  3 02:18 shared/HITS.pool.root.1
[2026-03-03 02:19:29]  *** Contents of shared directory: ***
[2026-03-03 02:19:29] total 443552
[2026-03-03 02:19:29] -rw-r--r-- 2 boincer umatlas 253870614 Mar  2 23:40 ATLAS.root_0
[2026-03-03 02:19:29] -rw-r--r-- 2 boincer umatlas     15845 Mar  2 23:40 start_atlas.sh
[2026-03-03 02:19:29] -rw-r--r-- 2 boincer umatlas    597961 Mar  2 23:40 input.tar.gz
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas 197963763 Mar  3 02:18 HITS.pool.root.1
[2026-03-03 02:19:29] -rw------- 1 boincer umatlas   1740800 Mar  3 02:19 result.tar.gz
02:19:31 (3515): run_atlas exited; CPU time 70806.110728
02:19:31 (3515): called boinc_finish(0)

</stderr_txt>
]]>

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