Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:48:42 (3627722): wrapper (7.7.26015): starting
22:48:42 (3627722): wrapper: running run_atlas (--nthreads 3)
[2026-03-03 22:48:42] Arguments: --nthreads 3
[2026-03-03 22:48:42] Threads: 3
[2026-03-03 22:48:42] Checking for CVMFS
[2026-03-03 22:48:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 22:48:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 22:48:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 22:48:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 22:48:42] 2.9.2.0 2437992 9025 85900 156857 2 50 28614235 36864000 0 130560 0 3348942 99.980 344591 15368 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-03 22:48:42] CVMFS is ok
[2026-03-03 22:48:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 22:48:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 22:48:42] Further information can be found at the LHC@home message board.
[2026-03-03 22:48:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 22:48:42] Checking for apptainer binary...
[2026-03-03 22:48:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 22:48:42] Running /usr/bin/apptainer --version
[2026-03-03 22:48:42] apptainer version 1.4.1-1.1
[2026-03-03 22:48:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 22:48:42] atlasA303a
[2026-03-03 22:48:42] apptainer works
[2026-03-03 22:48:43] Set ATHENA_PROC_NUMBER=3
[2026-03-03 22:48:43] Set ATHENA_CORE_NUMBER=3
[2026-03-03 22:48:43] Starting ATLAS job with PandaID=7036175551
[2026-03-03 22:48:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 00:31:07]  *** The last 200 lines of the pilot log: ***
[2026-03-04 00:31:07] 2026-03-03 23:30:28,417 | INFO     | did not find any defunct processes belonging to 3636199
[2026-03-04 00:31:07] 2026-03-03 23:30:28,417 | INFO     | did not find any defunct processes belonging to 3636199
[2026-03-04 00:31:07] 2026-03-03 23:30:28,418 | INFO     | ready for new job
[2026-03-04 00:31:07] 2026-03-03 23:30:28,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 00:31:07] 2026-03-03 23:30:28,418 | INFO     | **************************************
[2026-03-04 00:31:07] 2026-03-03 23:30:28,418 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 00:31:07] 2026-03-03 23:30:28,418 | INFO     | **************************************
[2026-03-04 00:31:07] 2026-03-03 23:30:28,418 | INFO     | 
[2026-03-04 00:31:07] 2026-03-03 23:30:28,419 | INFO     | architecture information:
[2026-03-04 00:31:07] 2026-03-03 23:30:28,419 | INFO     | executing command: cat /etc/os-release
[2026-03-04 00:31:07] 2026-03-03 23:30:28,428 | INFO     | cat /etc/os-release:
[2026-03-04 00:31:07] NAME="CentOS Linux"
[2026-03-04 00:31:07] VERSION="7 (Core)"
[2026-03-04 00:31:07] ID="centos"
[2026-03-04 00:31:07] ID_LIKE="rhel fedora"
[2026-03-04 00:31:07] VERSION_ID="7"
[2026-03-04 00:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 00:31:07] ANSI_COLOR="0;31"
[2026-03-04 00:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 00:31:07] HOME_URL="https://www.centos.org/"
[2026-03-04 00:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 00:31:07] 
[2026-03-04 00:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 00:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 00:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 00:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 00:31:07] 
[2026-03-04 00:31:07] 2026-03-03 23:30:28,428 | INFO     | **************************************
[2026-03-04 00:31:07] 2026-03-03 23:30:28,932 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-04 00:31:07] 2026-03-03 23:30:28,945 | INFO     | sufficient remaining disk space (375596777472 B)
[2026-03-04 00:31:07] 2026-03-03 23:30:28,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 00:31:07] 2026-03-03 23:30:28,945 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 00:31:07] 2026-03-03 23:30:28,945 | INFO     | update_server=False
[2026-03-04 00:31:07] 2026-03-03 23:30:28,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 00:31:07] 2026-03-03 23:30:28,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 00:31:07] 2026-03-03 23:30:28,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 00:31:07] 2026-03-03 23:30:29,299 | INFO     | all payload control threads have been joined
[2026-03-04 00:31:07] 2026-03-03 23:30:29,368 | INFO     | all job control threads have been joined
[2026-03-04 00:31:07] 2026-03-03 23:30:29,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 00:31:07] 2026-03-03 23:30:29,951 | INFO     | [job] queue monitor thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:29,951 | INFO     | [job] retrieve thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:29,965 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:29,975 | INFO     | all data control threads have been joined
[2026-03-04 00:31:07] 2026-03-03 23:30:30,118 | INFO     | [data] copytool_in thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:30,304 | INFO     | [payload] control thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:30,328 | WARNING  | process 3636199 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 00:31:07] 2026-03-03 23:30:30,356 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 00:31:07] 2026-03-03 23:30:30,374 | INFO     | [job] control thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:30,391 | INFO     | number of running child processes to parent process 3636199: 1
[2026-03-04 00:31:07] 2026-03-03 23:30:30,391 | INFO     | maximum number of monitored processes: 6
[2026-03-04 00:31:07] 2026-03-03 23:30:30,391 | INFO     | aborting job monitoring since job object (job id=7036175551) has expired
[2026-03-04 00:31:07] 2026-03-03 23:30:30,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 00:31:07] 2026-03-03 23:30:30,391 | INFO     | will abort loop
[2026-03-04 00:31:07] 2026-03-03 23:30:30,576 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:30,981 | INFO     | [data] control thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:31,006 | INFO     | [payload] validate_post thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:31,367 | INFO     | [job] validate thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:31,396 | INFO     | [job] job monitor thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:31,422 | INFO     | [data] copytool_out thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:31,430 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:31,517 | INFO     | [payload] failed_post thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:32,952 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:39,272 | INFO     | job.realtimelogging is not enabled
[2026-03-04 00:31:07] 2026-03-03 23:30:40,277 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 00:31:07] 2026-03-03 23:30:59,623 | INFO     | PID=3631766 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 00:31:07] 2026-03-03 23:30:59,623 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 00:31:07] 2026-03-03 23:30:59,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 00:31:07] 2026-03-03 23:30:59,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 00:31:07] 2026-03-03 23:31:01,288 | INFO     | [monitor] cgroup control has ended
[2026-03-04 00:31:07] 2026-03-03 23:31:02,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137543657280)>', '<ExcThread(monitor, started 140136889165568)>']
[2026-03-04 00:31:07] 2026-03-03 23:31:02,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 00:31:07] 2026-03-03 23:31:02,636 | INFO     | [monitor] control thread has ended
[2026-03-04 00:31:07] 2026-03-03 23:31:07,400 | INFO     | all workflow threads have been joined
[2026-03-04 00:31:07] 2026-03-03 23:31:07,400 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 00:31:07] 2026-03-03 23:31:07,400 | INFO     | traces error code: 0
[2026-03-04 00:31:07] 2026-03-03 23:31:07,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 00:31:07] 2026-03-03 23:31:07,452 [wrapper] ==== pilot stdout END ====
[2026-03-04 00:31:07] 2026-03-03 23:31:07,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 00:31:07] 2026-03-03 23:31:07,456 [wrapper] pilotpid: 3631766
[2026-03-04 00:31:07] 2026-03-03 23:31:07,459 [wrapper] Pilot exit status: 0
[2026-03-04 00:31:07] 2026-03-03 23:31:07,467 [wrapper] pandaids: 7036175551
[2026-03-04 00:31:07] 2026-03-03 23:31:07,484 [wrapper] cleanup supervisor_pilot 3641684 3631767
[2026-03-04 00:31:07] 2026-03-03 23:31:07,486 [wrapper] Test setup, not cleaning
[2026-03-04 00:31:07] 2026-03-03 23:31:07,489 [wrapper] apfmon messages muted
[2026-03-04 00:31:07] 2026-03-03 23:31:07,492 [wrapper] ==== wrapper stdout END ====
[2026-03-04 00:31:07] 2026-03-03 23:31:07,494 [wrapper] ==== wrapper stderr END ====
[2026-03-04 00:31:07]  *** Error codes and diagnostics ***
[2026-03-04 00:31:07]     "exeErrorCode": 0,
[2026-03-04 00:31:07]     "exeErrorDiag": "",
[2026-03-04 00:31:07]     "pilotErrorCode": 0,
[2026-03-04 00:31:07]     "pilotErrorDiag": "",
[2026-03-04 00:31:07]  *** Listing of results directory ***
[2026-03-04 00:31:07] total 445028
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc      5111 Mar  3 01:02 queuedata.json
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc    584627 Mar  3 01:05 pilot3.tar.gz
[2026-03-04 00:31:07] -rwx------ 1 boinc boinc     36322 Mar  3 01:05 runpilot2-wrapper.sh
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc       100 Mar  3 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 00:31:07] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 22:48 run_atlas
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc       105 Mar  3 22:48 job.xml
[2026-03-04 00:31:07] -rw-r--r-- 2 boinc boinc 253870614 Mar  3 22:48 EVNT.48460333._000002.pool.root.1
[2026-03-04 00:31:07] -rw-r--r-- 2 boinc boinc    597959 Mar  3 22:48 input.tar.gz
[2026-03-04 00:31:07] -rw-r--r-- 2 boinc boinc     15845 Mar  3 22:48 start_atlas.sh
[2026-03-04 00:31:07] drwxrwx--x 2 boinc boinc      4096 Mar  3 22:48 shared
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc         0 Mar  3 22:48 boinc_setup_complete
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc      6450 Mar  3 22:48 init_data.xml
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc         0 Mar  3 22:48 boinc_lockfile
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc      2616 Mar  3 22:48 pandaJob.out
[2026-03-04 00:31:07] -rw------- 1 boinc boinc    998484 Mar  3 22:48 agis_schedconf.cvmfs.json
[2026-03-04 00:31:07] -rw------- 1 boinc boinc   1516092 Mar  3 22:48 agis_ddmendpoints.agis.ALL.json
[2026-03-04 00:31:07] -rw------- 1 boinc boinc       427 Mar  3 22:48 workernode_map.json
[2026-03-04 00:31:07] drwx------ 5 boinc boinc      4096 Mar  3 22:48 pilot3
[2026-03-04 00:31:07] -rw------- 1 boinc boinc 195629592 Mar  4 00:30 HITS.48851556._000026.pool.root.1
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc       529 Mar  4 00:30 boinc_task_state.xml
[2026-03-04 00:31:07] -rw------- 1 boinc boinc        95 Mar  4 00:30 pilot_heartbeat.json
[2026-03-04 00:31:07] -rw------- 1 boinc boinc      1011 Mar  4 00:30 memory_monitor_summary.json
[2026-03-04 00:31:07] -rw------- 1 boinc boinc    254513 Mar  4 00:30 log.48851556._000026.job.log.tgz.1
[2026-03-04 00:31:07] -rw------- 1 boinc boinc      6287 Mar  4 00:30 heartbeat.json
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc      8192 Mar  4 00:31 boinc_mmap_file
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc        27 Mar  4 00:31 wrapper_checkpoint.txt
[2026-03-04 00:31:07] -rw------- 1 boinc boinc      5344 Mar  4 00:31 pilotlog.txt
[2026-03-04 00:31:07] -rw------- 1 boinc boinc    884951 Mar  4 00:31 log.48851556._000026.job.log.1
[2026-03-04 00:31:07] -rw------- 1 boinc boinc       357 Mar  4 00:31 output.list
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc       620 Mar  4 00:31 runtime_log
[2026-03-04 00:31:07] -rw------- 1 boinc boinc   1157120 Mar  4 00:31 result.tar.gz
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc      8916 Mar  4 00:31 runtime_log.err
[2026-03-04 00:31:07] -rw------- 1 boinc boinc       661 Mar  4 00:31 errLDmhRSH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIDDLDmpIEuVn.diag
[2026-03-04 00:31:07] -rw-r--r-- 1 boinc boinc     10485 Mar  4 00:31 stderr.txt
[2026-03-04 00:31:07] HITS file was successfully produced:
[2026-03-04 00:31:07] -rw------- 1 boinc boinc 195629592 Mar  4 00:30 shared/HITS.pool.root.1
[2026-03-04 00:31:07]  *** Contents of shared directory: ***
[2026-03-04 00:31:07] total 440712
[2026-03-04 00:31:07] -rw-r--r-- 2 boinc boinc 253870614 Mar  3 22:48 ATLAS.root_0
[2026-03-04 00:31:07] -rw-r--r-- 2 boinc boinc    597959 Mar  3 22:48 input.tar.gz
[2026-03-04 00:31:07] -rw-r--r-- 2 boinc boinc     15845 Mar  3 22:48 start_atlas.sh
[2026-03-04 00:31:07] -rw------- 1 boinc boinc 195629592 Mar  4 00:30 HITS.pool.root.1
[2026-03-04 00:31:07] -rw------- 1 boinc boinc   1157120 Mar  4 00:31 result.tar.gz
00:31:09 (3627722): run_atlas exited; CPU time 17581.367940
00:31:09 (3627722): called boinc_finish(0)

</stderr_txt>
]]>

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