Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:41:50 (3499831): wrapper (7.7.26015): starting
19:41:50 (3499831): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 19:41:50] Arguments: --nthreads 12
[2026-03-02 19:41:50] Threads: 12
[2026-03-02 19:41:50] Checking for CVMFS
[2026-03-02 19:41:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 19:41:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 19:41:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 19:41:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 19:41:51] 2.11.3.0 3054375 132381 228480 156830 2 617 29739172 45568001 19754 130560 0 1322771049 99.821 715881701 18780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-02 19:41:51] CVMFS is ok
[2026-03-02 19:41:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 19:41:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 19:41:51] Further information can be found at the LHC@home message board.
[2026-03-02 19:41:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 19:41:51] Checking for apptainer binary...
[2026-03-02 19:41:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 19:41:51] Running /usr/bin/apptainer --version
[2026-03-02 19:41:51] apptainer version 1.4.1-1.el9
[2026-03-02 19:41:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 19:41:52] wns0170.triumf.lcg
[2026-03-02 19:41:52] apptainer works
[2026-03-02 19:41:52] Set ATHENA_PROC_NUMBER=12
[2026-03-02 19:41:52] Set ATHENA_CORE_NUMBER=12
[2026-03-02 19:41:52] Starting ATLAS job with PandaID=7036134897
[2026-03-02 19:41:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 19:46:26]  *** The last 200 lines of the pilot log: ***
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | found no stored workdir sizes
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | WARNING  | wrong length of table data, x=[1772509373.0], y=[5841.0] (must be same and length>=4)
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | could have reported an average CPU frequency of 3091 MHz (4 samples)
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | ..............................
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . Timing measurements:
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . get job = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . initial setup = 16 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . payload setup = 12 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . stage-in = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . payload execution = 29 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . stage-out = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . log creation = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | ..............................
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036134897/pilotlog.txt
[2026-03-02 19:46:26] 2026-03-03 03:45:19,915 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-02 19:46:26] - Log from pilotlog.txt -
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | found no stored workdir sizes
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | WARNING  | wrong length of table data, x=[1772509373.0], y=[5841.0] (must be same and length>=4)
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | could have reported an average CPU frequency of 3091 MHz (4 samples)
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | ..............................
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . Timing measurements:
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . get job = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . initial setup = 16 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . payload setup = 12 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . stage-in = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . payload execution = 29 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . stage-out = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . log creation = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | ..............................
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036134897/pilotlog.txt
[2026-03-02 19:46:26] 2026-03-03 03:45:19,915 | WARNING  | 
[2026-03-02 19:46:26] [begin log extracts]
[2026-03-02 19:46:26] - Log from pilotlog.txt -
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | WARNING  | found no stored workdir sizes
[2026-03-02 19:46:26] 2026-03-03 03:45:19,901 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | WARNING  | wrong length of table data, x=[1772509373.0], y=[5841.0] (must be same and length>=4)
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | could have reported an average CPU frequency of 3091 MHz (4 samples)
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | ..............................
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . Timing measurements:
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . get job = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . initial setup = 16 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . payload setup = 12 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . stage-in = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . payload execution = 29 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . stage-out = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | . log creation = 0 s
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | ..............................
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 19:46:26] 2026-03-03 03:45:19,902 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036134897/pilotlog.txt
[2026-03-02 19:46:26] [end log extracts]
[2026-03-02 19:46:26] 2026-03-03 03:45:19,915 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-02 19:46:26] 2026-03-03 03:45:19,916 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | 
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | job summary report
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | --------------------------------------------------
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | PanDA job id: 7036134897
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | task id: 48841995
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-02 19:43:06,869 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | pilot state: failed 
[2026-03-02 19:46:26] 2026-03-03 03:45:20,230 | INFO     | transexitcode: 65
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | exeerrorcode: 65
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | exitcode: 65
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | cpuconsumptiontime: 10 s
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | nevents: 0
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | neventsw: 0
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | pid: 3508121
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | pgrp: 3508121
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | corecount: 12
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | event service: False
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | sizes: {0: 2282170, 11: 2282170, 45: 2305357, 46: 2309649, 49: 2309677, 168: 2309843}
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | --------------------------------------------------
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | 
[2026-03-02 19:46:26] 2026-03-03 03:45:20,231 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-02 19:46:26] 2026-03-03 03:45:20,385 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,385 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,385 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | job 7036134897 has completed (purged errors)
[2026-03-02 19:46:26] 2026-03-03 03:45:20,386 | INFO     | overall cleanup function is called
[2026-03-02 19:46:26] 2026-03-03 03:45:21,393 | INFO     | --- collectZombieJob: --- 10, [3508121]
[2026-03-02 19:46:26] 2026-03-03 03:45:21,418 | INFO     | zombie collector waiting for pid 3508121
[2026-03-02 19:46:26] 2026-03-03 03:45:21,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 19:46:26] 2026-03-03 03:45:21,419 | INFO     | collected zombie processes
[2026-03-02 19:46:26] 2026-03-03 03:45:21,419 | INFO     | will attempt to kill all subprocesses of pid=3508121
[2026-03-02 19:46:26] 2026-03-03 03:45:21,418 | INFO     | PID=3503519 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 19:46:26] 2026-03-03 03:45:21,455 | INFO     | .. there are 35 such processes running
[2026-03-02 19:46:26] 2026-03-03 03:45:21,676 | INFO     | process IDs to be killed: [3508121] (in reverse order)
[2026-03-02 19:46:26] 2026-03-03 03:45:21,730 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 19:46:26] 2026-03-03 03:45:21,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 19:46:26] 2026-03-03 03:45:21,737 | INFO     | did not find any defunct processes belonging to 3508121
[2026-03-02 19:46:26] 2026-03-03 03:45:21,742 | INFO     | did not find any defunct processes belonging to 3508121
[2026-03-02 19:46:26] 2026-03-03 03:45:21,742 | INFO     | ready for new job
[2026-03-02 19:46:26] 2026-03-03 03:45:21,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 19:46:26] 2026-03-03 03:45:21,743 | INFO     | **************************************
[2026-03-02 19:46:26] 2026-03-03 03:45:21,743 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 19:46:26] 2026-03-03 03:45:21,743 | INFO     | **************************************
[2026-03-02 19:46:26] 2026-03-03 03:45:21,743 | INFO     | 
[2026-03-02 19:46:26] 2026-03-03 03:45:21,745 | INFO     | architecture information:
[2026-03-02 19:46:26] 2026-03-03 03:45:21,745 | INFO     | executing command: cat /etc/os-release
[2026-03-02 19:46:26] 2026-03-03 03:45:21,760 | INFO     | cat /etc/os-release:
[2026-03-02 19:46:26] NAME="CentOS Linux"
[2026-03-02 19:46:26] VERSION="7 (Core)"
[2026-03-02 19:46:26] ID="centos"
[2026-03-02 19:46:26] ID_LIKE="rhel fedora"
[2026-03-02 19:46:26] VERSION_ID="7"
[2026-03-02 19:46:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 19:46:26] ANSI_COLOR="0;31"
[2026-03-02 19:46:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 19:46:26] HOME_URL="https://www.centos.org/"
[2026-03-02 19:46:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 19:46:26] 
[2026-03-02 19:46:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 19:46:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 19:46:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 19:46:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 19:46:26] 
[2026-03-02 19:46:26] 2026-03-03 03:45:21,760 | INFO     | **************************************
[2026-03-02 19:46:26] 2026-03-03 03:45:22,265 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-02 19:46:26] 2026-03-03 03:45:22,405 | INFO     | sufficient remaining disk space (2459744337920 B)
[2026-03-02 19:46:26] 2026-03-03 03:45:22,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 19:46:26] 2026-03-03 03:45:22,406 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 19:46:26] 2026-03-03 03:45:22,406 | INFO     | update_server=False
[2026-03-02 19:46:26] 2026-03-03 03:45:22,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 19:46:26] 2026-03-03 03:45:22,406 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-02 19:46:26] 2026-03-03 03:45:22,406 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 19:46:26] 2026-03-03 03:45:22,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 19:46:26] 2026-03-03 03:45:22,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 19:46:26] 2026-03-03 03:45:22,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 19:46:26] 2026-03-03 03:45:22,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 19:46:26] 2026-03-03 03:45:22,631 | INFO     | aborting loop
[2026-03-02 19:46:26] 2026-03-03 03:45:23,171 | INFO     | all data control threads have been joined
[2026-03-02 19:46:26] 2026-03-03 03:45:23,339 | INFO     | all payload control threads have been joined
[2026-03-02 19:46:26] 2026-03-03 03:45:23,412 | INFO     | [job] retrieve thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:23,566 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:23,637 | INFO     | [job] job monitor thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:23,687 | INFO     | all job control threads have been joined
[2026-03-02 19:46:26] 2026-03-03 03:45:24,176 | INFO     | [data] control thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,196 | INFO     | [payload] failed_post thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,241 | INFO     | [job] validate thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,345 | INFO     | [payload] control thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,414 | INFO     | [data] copytool_out thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,487 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,550 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,647 | INFO     | [payload] validate_post thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,693 | INFO     | [job] control thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,749 | INFO     | [data] copytool_in thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:24,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 19:46:26] 2026-03-03 03:45:25,073 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 19:46:26] 2026-03-03 03:45:26,079 | INFO     | [job] queue monitor thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:45:28,975 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 19:46:26] 2026-03-03 03:46:20,440 | INFO     | [monitor] cgroup control has ended
[2026-03-02 19:46:26] 2026-03-03 03:46:21,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220246415168)>', '<ExcThread(monitor, started 140219407922944)>']
[2026-03-02 19:46:26] 2026-03-03 03:46:21,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 19:46:26] 2026-03-03 03:46:21,763 | INFO     | [monitor] control thread has ended
[2026-03-02 19:46:26] 2026-03-03 03:46:26,064 | INFO     | all workflow threads have been joined
[2026-03-02 19:46:26] 2026-03-03 03:46:26,064 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 19:46:26] 2026-03-03 03:46:26,064 | INFO     | traces error code: 0
[2026-03-02 19:46:26] 2026-03-03 03:46:26,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 19:46:26] 2026-03-03 03:46:26,192 [wrapper] ==== pilot stdout END ====
[2026-03-02 19:46:26] 2026-03-03 03:46:26,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 19:46:26] 2026-03-03 03:46:26,210 [wrapper] pilotpid: 3503519
[2026-03-02 19:46:26] 2026-03-03 03:46:26,211 [wrapper] Pilot exit status: 0
[2026-03-02 19:46:26] 2026-03-03 03:46:26,230 [wrapper] pandaids: 7036134897
[2026-03-02 19:46:26] 2026-03-03 03:46:26,265 [wrapper] cleanup supervisor_pilot 3503527 3503520
[2026-03-02 19:46:26] 2026-03-03 03:46:26,272 [wrapper] Test setup, not cleaning
[2026-03-02 19:46:26] 2026-03-03 03:46:26,279 [wrapper] apfmon messages muted
[2026-03-02 19:46:26] 2026-03-03 03:46:26,280 [wrapper] ==== wrapper stdout END ====
[2026-03-02 19:46:26] 2026-03-03 03:46:26,282 [wrapper] ==== wrapper stderr END ====
[2026-03-02 19:46:26]  *** Error codes and diagnostics ***
[2026-03-02 19:46:26]     "exeErrorCode": 65,
[2026-03-02 19:46:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 19:46:26]     "pilotErrorCode": 1305,
[2026-03-02 19:46:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 19:46:26]  *** Listing of results directory ***
[2026-03-02 19:46:26] total 312728
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc    584627 Mar  2 15:56 pilot3.tar.gz
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc      5111 Mar  2 15:57 queuedata.json
[2026-03-02 19:46:26] -rwx------. 1 boinc boinc     36322 Mar  2 15:58 runpilot2-wrapper.sh
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc       100 Mar  2 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 19:46:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 19:41 run_atlas
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc       105 Mar  2 19:41 job.xml
[2026-03-02 19:46:26] -rw-r--r--. 2 boinc boinc 316121187 Mar  2 19:41 EVNT.48252743._000096.pool.root.1
[2026-03-02 19:46:26] -rw-r--r--. 2 boinc boinc     15845 Mar  2 19:41 start_atlas.sh
[2026-03-02 19:46:26] drwxrwx--x. 2 boinc boinc      4096 Mar  2 19:41 shared
[2026-03-02 19:46:26] -rw-r--r--. 2 boinc boinc    597949 Mar  2 19:41 input.tar.gz
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc      6627 Mar  2 19:41 init_data.xml
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc         0 Mar  2 19:41 boinc_lockfile
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc      2492 Mar  2 19:41 pandaJob.out
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc    997730 Mar  2 19:42 agis_schedconf.cvmfs.json
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc   1512931 Mar  2 19:42 agis_ddmendpoints.agis.ALL.json
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc       444 Mar  2 19:42 workernode_map.json
[2026-03-02 19:46:26] drwx------. 5 boinc boinc      4096 Mar  2 19:42 pilot3
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc       522 Mar  2 19:43 boinc_task_state.xml
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc       955 Mar  2 19:43 memory_monitor_summary.json
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc     20831 Mar  2 19:43 log.48841995._002423.job.log.tgz.1
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc        95 Mar  2 19:45 pilot_heartbeat.json
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc      7015 Mar  2 19:45 heartbeat.json
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc        22 Mar  2 19:46 wrapper_checkpoint.txt
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc      4547 Mar  2 19:46 pilotlog.txt
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc     81992 Mar  2 19:46 log.48841995._002423.job.log.1
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc       188 Mar  2 19:46 output.list
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc       620 Mar  2 19:46 runtime_log
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc    122880 Mar  2 19:46 result.tar.gz
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc      8192 Mar  2 19:46 boinc_mmap_file
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc      8635 Mar  2 19:46 runtime_log.err
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc       642 Mar  2 19:46 GeFNDmgKSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZ1ELDmJY5k3n.diag
[2026-03-02 19:46:26] -rw-r--r--. 1 boinc boinc      2146 Mar  2 19:46 stderr.txt
[2026-03-02 19:46:26] No HITS result produced
[2026-03-02 19:46:26]  *** Contents of shared directory: ***
[2026-03-02 19:46:26] total 309436
[2026-03-02 19:46:26] -rw-r--r--. 2 boinc boinc 316121187 Mar  2 19:41 ATLAS.root_0
[2026-03-02 19:46:26] -rw-r--r--. 2 boinc boinc     15845 Mar  2 19:41 start_atlas.sh
[2026-03-02 19:46:26] -rw-r--r--. 2 boinc boinc    597949 Mar  2 19:41 input.tar.gz
[2026-03-02 19:46:26] -rw-------. 1 boinc boinc    122880 Mar  2 19:46 result.tar.gz
19:46:28 (3499831): run_atlas exited; CPU time 15.342808
19:46:28 (3499831): called boinc_finish(0)

</stderr_txt>
]]>

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