Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:55:15 (2575208): wrapper (7.7.26015): starting
05:55:15 (2575208): wrapper: running run_atlas (--nthreads 5)
[2026-03-03 05:55:15] Arguments: --nthreads 5
[2026-03-03 05:55:15] Threads: 5
[2026-03-03 05:55:15] Checking for CVMFS
[2026-03-03 05:55:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 05:55:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 05:55:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 05:55:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 05:55:18] 2.11.0.0 919232 8361 96924 156841 1 188 3700609 4096000 6454 130560 0 17974113 99.996 311592 1248 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 05:55:18] CVMFS is ok
[2026-03-03 05:55:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 05:55:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 05:55:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 05:55:18] Further information can be found at the LHC@home message board.
[2026-03-03 05:55:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 05:55:18] Checking for apptainer binary...
[2026-03-03 05:55:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 05:55:18] Running /usr/bin/apptainer --version
[2026-03-03 05:55:18] apptainer version 1.4.5
[2026-03-03 05:55:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 05:55:18] x32-linux4
[2026-03-03 05:55:18] apptainer works
[2026-03-03 05:55:18] Set ATHENA_PROC_NUMBER=5
[2026-03-03 05:55:18] Set ATHENA_CORE_NUMBER=5
[2026-03-03 05:55:18] Starting ATLAS job with PandaID=7033880071
[2026-03-03 05:55:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 08:27:08]  *** The last 200 lines of the pilot log: ***
[2026-03-03 08:27:08] 2026-03-03 13:26:11,108 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7033880071/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,108 | INFO     | extracted standard info from prmon json
[2026-03-03 08:27:08] 2026-03-03 13:26:11,108 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 08:27:08] 2026-03-03 13:26:11,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 08:27:08] 2026-03-03 13:26:11,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 08:27:08] 2026-03-03 13:26:11,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 08:27:08] 2026-03-03 13:26:11,115 | INFO     | fitting pss+swap vs Time
[2026-03-03 08:27:08] 2026-03-03 13:26:11,115 | INFO     | sum of square deviations: 1005179777.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,116 | INFO     | sum of deviations: 10473656446.000006
[2026-03-03 08:27:08] 2026-03-03 13:26:11,116 | INFO     | mean x: 1772539861.5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,116 | INFO     | mean y: 2343935.7297297297
[2026-03-03 08:27:08] 2026-03-03 13:26:11,116 | INFO     | intersect: -18466962720.637108
[2026-03-03 08:27:08] 2026-03-03 13:26:11,116 | INFO     | chi2: 2.0466010254104785
[2026-03-03 08:27:08] 2026-03-03 13:26:11,116 | INFO     | sum of square deviations: 906703512.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,117 | INFO     | sum of deviations: 18599537144.999996
[2026-03-03 08:27:08] 2026-03-03 13:26:11,117 | INFO     | mean x: 1772539709.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,120 | INFO     | mean y: 2356150.7832167833
[2026-03-03 08:27:08] 2026-03-03 13:26:11,120 | INFO     | intersect: -36358392122.71965
[2026-03-03 08:27:08] 2026-03-03 13:26:11,120 | INFO     | chi2: 1.37373115647603
[2026-03-03 08:27:08] 2026-03-03 13:26:11,120 | INFO     | current chi2=1.37373115647603 (change=32.8774324150206 %)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,120 | INFO     | sum of square deviations: 814878534.5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,121 | INFO     | sum of deviations: 17869937281.5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,121 | INFO     | mean x: 1772539556.5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,121 | INFO     | mean y: 2354938.775362319
[2026-03-03 08:27:08] 2026-03-03 13:26:11,121 | INFO     | intersect: -38868678427.03583
[2026-03-03 08:27:08] 2026-03-03 13:26:11,121 | INFO     | chi2: 1.3751976681835356
[2026-03-03 08:27:08] 2026-03-03 13:26:11,121 | INFO     | current chi2=1.3751976681835356 (change=-0.10675390891385507 %)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,121 | INFO     | right removable region: 137
[2026-03-03 08:27:08] 2026-03-03 13:26:11,122 | INFO     | sum of square deviations: 906703512.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,122 | INFO     | sum of deviations: -8543749426.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,122 | INFO     | mean x: 1772540014.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,122 | INFO     | mean y: 2372862.4895104896
[2026-03-03 08:27:08] 2026-03-03 13:26:11,122 | INFO     | intersect: 16704787187.288698
[2026-03-03 08:27:08] 2026-03-03 13:26:11,122 | INFO     | chi2: 0.7042975618369548
[2026-03-03 08:27:08] 2026-03-03 13:26:11,122 | INFO     | current chi2=0.7042975618369548 (change=65.58696330684694 %)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,123 | INFO     | sum of square deviations: 814878534.5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,127 | INFO     | sum of deviations: -6974531166.5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,127 | INFO     | mean x: 1772540166.5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,127 | INFO     | mean y: 2370240.0362318843
[2026-03-03 08:27:08] 2026-03-03 13:26:11,127 | INFO     | intersect: 15173510614.6111
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | chi2: 0.7014346913270715
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | current chi2=0.7014346913270715 (change=0.4064859322267646 %)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | left removable region: 20
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | sum of square deviations: 496597218.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | sum of deviations: 1072751795.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | mean x: 1772540136.0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | mean y: 2384174.965811966
[2026-03-03 08:27:08] 2026-03-03 13:26:11,128 | INFO     | intersect: -3826665895.5554132
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | chi2: 0.0006230513048060829
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | current memory leak: 2.16 B/s (using 117 data points, chi2=0.00)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | could have reported an average CPU frequency of 3846 MHz (8 samples)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | ..............................
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . Timing measurements:
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . get job = 0 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . initial setup = 10 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . payload setup = 10 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . stage-in = 0 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . payload execution = 8992 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . stage-out = 0 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,129 | INFO     | . log creation = 0 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,130 | INFO     | ..............................
[2026-03-03 08:27:08] 2026-03-03 13:26:11,261 | INFO     | 
[2026-03-03 08:27:08] 2026-03-03 13:26:11,261 | INFO     | job summary report
[2026-03-03 08:27:08] 2026-03-03 13:26:11,261 | INFO     | --------------------------------------------------
[2026-03-03 08:27:08] 2026-03-03 13:26:11,261 | INFO     | PanDA job id: 7033880071
[2026-03-03 08:27:08] 2026-03-03 13:26:11,261 | INFO     | task id: 48787024
[2026-03-03 08:27:08] 2026-03-03 13:26:11,261 | INFO     | errors: (none)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,261 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | pilot state: finished 
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | transexitcode: 0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | exeerrorcode: 0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | exeerrordiag: 
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | exitcode: 0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | exitmsg: OK
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | cpuconsumptiontime: 35998 s
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | nevents: 400
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | neventsw: 0
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | pid: 2583965
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | pgrp: 2583965
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | corecount: 5
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | event service: False
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | sizes: {0: 2286689, 1: 2287150, 11: 2287150, 9007: 2315312, 9008: 2324324, 9011: 2324380, 9013: 2324702}
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | --------------------------------------------------
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | 
[2026-03-03 08:27:08] 2026-03-03 13:26:11,262 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-03-03 08:27:08] 2026-03-03 13:26:11,295 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,295 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,296 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,297 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 08:27:08] 2026-03-03 13:26:11,297 | INFO     | job 7033880071 has completed (purged errors)
[2026-03-03 08:27:08] 2026-03-03 13:26:11,297 | INFO     | overall cleanup function is called
[2026-03-03 08:27:08] 2026-03-03 13:26:11,775 | INFO     | PID=2579397 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 08:27:08] 2026-03-03 13:26:11,779 | INFO     | .. there are 8 such processes running
[2026-03-03 08:27:08] 2026-03-03 13:26:12,309 | INFO     | --- collectZombieJob: --- 10, [2583965]
[2026-03-03 08:27:08] 2026-03-03 13:26:12,309 | INFO     | zombie collector waiting for pid 2583965
[2026-03-03 08:27:08] 2026-03-03 13:26:12,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 08:27:08] 2026-03-03 13:26:12,309 | INFO     | collected zombie processes
[2026-03-03 08:27:08] 2026-03-03 13:26:12,309 | INFO     | will attempt to kill all subprocesses of pid=2583965
[2026-03-03 08:27:08] 2026-03-03 13:26:12,593 | INFO     | process IDs to be killed: [2583965] (in reverse order)
[2026-03-03 08:27:08] 2026-03-03 13:26:12,699 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 08:27:08] 2026-03-03 13:26:12,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 08:27:08] 2026-03-03 13:26:12,711 | INFO     | did not find any defunct processes belonging to 2583965
[2026-03-03 08:27:08] 2026-03-03 13:26:12,720 | INFO     | did not find any defunct processes belonging to 2583965
[2026-03-03 08:27:08] 2026-03-03 13:26:12,720 | INFO     | ready for new job
[2026-03-03 08:27:08] 2026-03-03 13:26:12,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 08:27:08] 2026-03-03 13:26:12,721 | INFO     | **************************************
[2026-03-03 08:27:08] 2026-03-03 13:26:12,721 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 08:27:08] 2026-03-03 13:26:12,721 | INFO     | **************************************
[2026-03-03 08:27:08] 2026-03-03 13:26:12,722 | INFO     | 
[2026-03-03 08:27:08] 2026-03-03 13:26:12,727 | INFO     | architecture information:
[2026-03-03 08:27:08] 2026-03-03 13:26:12,727 | INFO     | executing command: cat /etc/os-release
[2026-03-03 08:27:08] 2026-03-03 13:26:12,752 | INFO     | cat /etc/os-release:
[2026-03-03 08:27:08] NAME="CentOS Linux"
[2026-03-03 08:27:08] VERSION="7 (Core)"
[2026-03-03 08:27:08] ID="centos"
[2026-03-03 08:27:08] ID_LIKE="rhel fedora"
[2026-03-03 08:27:08] VERSION_ID="7"
[2026-03-03 08:27:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 08:27:08] ANSI_COLOR="0;31"
[2026-03-03 08:27:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 08:27:08] HOME_URL="https://www.centos.org/"
[2026-03-03 08:27:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 08:27:08] 
[2026-03-03 08:27:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 08:27:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 08:27:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 08:27:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 08:27:08] 
[2026-03-03 08:27:08] 2026-03-03 13:26:12,752 | INFO     | **************************************
[2026-03-03 08:27:08] 2026-03-03 13:26:13,255 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-03-03 08:27:08] 2026-03-03 13:26:13,279 | INFO     | sufficient remaining disk space (136652521472 B)
[2026-03-03 08:27:08] 2026-03-03 13:26:13,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 08:27:08] 2026-03-03 13:26:13,279 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 08:27:08] 2026-03-03 13:26:13,279 | INFO     | update_server=False
[2026-03-03 08:27:08] 2026-03-03 13:26:13,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 08:27:08] 2026-03-03 13:26:13,284 | INFO     | all job control threads have been joined
[2026-03-03 08:27:08] 2026-03-03 13:26:13,651 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 08:27:08] 2026-03-03 13:26:13,651 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 08:27:08] 2026-03-03 13:26:13,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 08:27:08] 2026-03-03 13:26:13,651 | INFO     | will abort loop
[2026-03-03 08:27:08] 2026-03-03 13:26:14,184 | INFO     | all payload control threads have been joined
[2026-03-03 08:27:08] 2026-03-03 13:26:14,284 | INFO     | [job] retrieve thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:14,289 | INFO     | [job] control thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:14,373 | INFO     | all data control threads have been joined
[2026-03-03 08:27:08] 2026-03-03 13:26:14,649 | INFO     | [job] validate thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:14,656 | INFO     | [job] job monitor thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:14,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 08:27:08] 2026-03-03 13:26:14,732 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:14,750 | INFO     | [payload] validate_post thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:14,831 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:14,850 | INFO     | [payload] failed_post thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:15,071 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:15,192 | INFO     | [payload] control thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:15,211 | INFO     | [data] copytool_in thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:15,378 | INFO     | [data] control thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:15,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 08:27:08] 2026-03-03 13:26:15,648 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:16,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 08:27:08] 2026-03-03 13:26:16,713 | INFO     | [data] copytool_out thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:17,276 | INFO     | [job] queue monitor thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:19,618 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 08:27:08] 2026-03-03 13:26:44,127 | INFO     | PID=2579397 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 08:27:08] 2026-03-03 13:26:44,128 | INFO     | .. there are 8 such processes running
[2026-03-03 08:27:08] 2026-03-03 13:26:44,129 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 08:27:08] 2026-03-03 13:26:44,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 08:27:08] 2026-03-03 13:26:44,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 08:27:08] 2026-03-03 13:27:02,146 | INFO     | [monitor] cgroup control has ended
[2026-03-03 08:27:08] 2026-03-03 13:27:02,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131852577974080)>', '<ExcThread(monitor, started 131852224403200)>']
[2026-03-03 08:27:08] 2026-03-03 13:27:03,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 08:27:08] 2026-03-03 13:27:03,227 | INFO     | [monitor] control thread has ended
[2026-03-03 08:27:08] 2026-03-03 13:27:07,823 | INFO     | all workflow threads have been joined
[2026-03-03 08:27:08] 2026-03-03 13:27:07,823 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 08:27:08] 2026-03-03 13:27:07,823 | INFO     | traces error code: 0
[2026-03-03 08:27:08] 2026-03-03 13:27:07,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 08:27:08] 2026-03-03 13:27:07,991 [wrapper] ==== pilot stdout END ====
[2026-03-03 08:27:08] 2026-03-03 13:27:07,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 08:27:08] 2026-03-03 13:27:08,003 [wrapper] pilotpid: 2579397
[2026-03-03 08:27:08] 2026-03-03 13:27:08,008 [wrapper] Pilot exit status: 0
[2026-03-03 08:27:08] 2026-03-03 13:27:08,025 [wrapper] pandaids: 7033880071
[2026-03-03 08:27:08] 2026-03-03 13:27:08,104 [wrapper] cleanup supervisor_pilot 2684227 2579398
[2026-03-03 08:27:08] 2026-03-03 13:27:08,110 [wrapper] Test setup, not cleaning
[2026-03-03 08:27:08] 2026-03-03 13:27:08,115 [wrapper] apfmon messages muted
[2026-03-03 08:27:08] 2026-03-03 13:27:08,121 [wrapper] ==== wrapper stdout END ====
[2026-03-03 08:27:08] 2026-03-03 13:27:08,125 [wrapper] ==== wrapper stderr END ====
[2026-03-03 08:27:08]  *** Error codes and diagnostics ***
[2026-03-03 08:27:08]     "exeErrorCode": 0,
[2026-03-03 08:27:08]     "exeErrorDiag": "",
[2026-03-03 08:27:08]     "pilotErrorCode": 0,
[2026-03-03 08:27:08]     "pilotErrorDiag": "",
[2026-03-03 08:27:08]  *** Listing of results directory ***
[2026-03-03 08:27:08] total 497092
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc    584627 Feb 28 15:22 pilot3.tar.gz
[2026-03-03 08:27:08] -rwx------ 1 boinc boinc     36322 Feb 28 15:23 runpilot2-wrapper.sh
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc      5111 Feb 28 15:23 queuedata.json
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc       100 Mar  3 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 08:27:08] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 05:55 run_atlas
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc       105 Mar  3 05:55 job.xml
[2026-03-03 08:27:08] -rw-r--r-- 2 boinc boinc 296252942 Mar  3 05:55 EVNT.48787020._000011.pool.root.1
[2026-03-03 08:27:08] -rw-r--r-- 2 boinc boinc     15845 Mar  3 05:55 start_atlas.sh
[2026-03-03 08:27:08] drwxrwx--x 2 boinc boinc      4096 Mar  3 05:55 shared
[2026-03-03 08:27:08] -rw-r--r-- 2 boinc boinc    597973 Mar  3 05:55 input.tar.gz
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc         0 Mar  3 05:55 boinc_setup_complete
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc      9742 Mar  3 05:55 init_data.xml
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc         0 Mar  3 05:55 boinc_lockfile
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc      2595 Mar  3 05:55 pandaJob.out
[2026-03-03 08:27:08] -rw------- 1 boinc boinc    998420 Mar  3 05:55 agis_schedconf.cvmfs.json
[2026-03-03 08:27:08] -rw------- 1 boinc boinc   1516104 Mar  3 05:55 agis_ddmendpoints.agis.ALL.json
[2026-03-03 08:27:08] -rw------- 1 boinc boinc       419 Mar  3 05:55 workernode_map.json
[2026-03-03 08:27:08] drwx------ 5 boinc boinc      4096 Mar  3 05:55 pilot3
[2026-03-03 08:27:08] -rw------- 1 boinc boinc 205586570 Mar  3 08:25 HITS.48787024._000212.pool.root.1
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc       530 Mar  3 08:25 boinc_task_state.xml
[2026-03-03 08:27:08] -rw------- 1 boinc boinc      1025 Mar  3 08:26 memory_monitor_summary.json
[2026-03-03 08:27:08] -rw------- 1 boinc boinc    327566 Mar  3 08:26 log.48787024._000212.job.log.tgz.1
[2026-03-03 08:27:08] -rw------- 1 boinc boinc      6275 Mar  3 08:26 heartbeat.json
[2026-03-03 08:27:08] -rw------- 1 boinc boinc        95 Mar  3 08:26 pilot_heartbeat.json
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc      8192 Mar  3 08:27 boinc_mmap_file
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc        27 Mar  3 08:27 wrapper_checkpoint.txt
[2026-03-03 08:27:08] -rw------- 1 boinc boinc      5013 Mar  3 08:27 pilotlog.txt
[2026-03-03 08:27:08] -rw------- 1 boinc boinc   1296829 Mar  3 08:27 log.48787024._000212.job.log.1
[2026-03-03 08:27:08] -rw------- 1 boinc boinc       357 Mar  3 08:27 output.list
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc       620 Mar  3 08:27 runtime_log
[2026-03-03 08:27:08] -rw------- 1 boinc boinc   1638400 Mar  3 08:27 result.tar.gz
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc      8891 Mar  3 08:27 runtime_log.err
[2026-03-03 08:27:08] -rw------- 1 boinc boinc       644 Mar  3 08:27 Oi5NDmF1fG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmo07KDmrRpc5n.diag
[2026-03-03 08:27:08] -rw-r--r-- 1 boinc boinc     21222 Mar  3 08:27 stderr.txt
[2026-03-03 08:27:08] HITS file was successfully produced:
[2026-03-03 08:27:08] -rw------- 1 boinc boinc 205586570 Mar  3 08:25 shared/HITS.pool.root.1
[2026-03-03 08:27:08]  *** Contents of shared directory: ***
[2026-03-03 08:27:08] total 492292
[2026-03-03 08:27:08] -rw-r--r-- 2 boinc boinc 296252942 Mar  3 05:55 ATLAS.root_0
[2026-03-03 08:27:08] -rw-r--r-- 2 boinc boinc     15845 Mar  3 05:55 start_atlas.sh
[2026-03-03 08:27:08] -rw-r--r-- 2 boinc boinc    597973 Mar  3 05:55 input.tar.gz
[2026-03-03 08:27:08] -rw------- 1 boinc boinc 205586570 Mar  3 08:25 HITS.pool.root.1
[2026-03-03 08:27:08] -rw------- 1 boinc boinc   1638400 Mar  3 08:27 result.tar.gz
08:27:09 (2575208): run_atlas exited; CPU time 36142.723022
08:27:09 (2575208): called boinc_finish(0)

</stderr_txt>
]]>

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