Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-03 14:49:49 (7616): vboxwrapper version 26210
2026-03-03 14:49:49 (7616): BOINC client version: 8.2.4
2026-03-03 14:49:50 (7616): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-03-03 14:49:50 (7616): Successfully copied 'init_data.xml' to the shared directory.
2026-03-03 14:49:51 (7616): Create VM. (boinc_fad081a1452ba767, slot#0)
2026-03-03 14:49:51 (7616): Setting Memory Size for VM. (4800MB)
2026-03-03 14:49:52 (7616): Setting CPU Count for VM. (8)
2026-03-03 14:49:52 (7616): Setting Chipset Options for VM.
2026-03-03 14:49:52 (7616): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-03 14:49:52 (7616): Setting Boot Options for VM.
2026-03-03 14:49:53 (7616): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-03 14:49:53 (7616): Enabling VM Network Access.
2026-03-03 14:49:53 (7616): Disabling USB Support for VM.
2026-03-03 14:49:54 (7616): Disabling COM Port Support for VM.
2026-03-03 14:49:54 (7616): Disabling LPT Port Support for VM.
2026-03-03 14:49:54 (7616): Disabling Audio Support for VM.
2026-03-03 14:49:54 (7616): Disabling Clipboard Support for VM.
2026-03-03 14:49:55 (7616): Disabling Drag and Drop Support for VM.
2026-03-03 14:49:55 (7616): Adding storage controller(s) to VM.
2026-03-03 14:49:55 (7616): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-03 14:49:57 (7616): Adding VirtualBox Guest Additions to VM.
2026-03-03 14:49:58 (7616): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-03 14:49:58 (7616): forwarding host port 56716 to guest port 80
2026-03-03 14:49:58 (7616): Enabling remote desktop for VM.
2026-03-03 14:49:59 (7616): Enabling shared directory for VM.
2026-03-03 14:50:00 (7616): Starting VM using VBoxManage interface. (boinc_fad081a1452ba767, slot#0)
2026-03-03 14:50:06 (7616): Successfully started VM. (PID = '4412')
2026-03-03 14:50:06 (7616): Reporting VM Process ID to BOINC.
2026-03-03 14:50:06 (7616): Guest Log: BIOS: VirtualBox 7.1.4
2026-03-03 14:50:06 (7616): Guest Log: CPUID EDX: 0x178bfbff
2026-03-03 14:50:06 (7616): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-03 14:50:06 (7616): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-03 14:50:06 (7616): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-03 14:50:06 (7616): Detected: Web Application Enabled (http://localhost:56716)
2026-03-03 14:50:06 (7616): Detected: Remote Desktop Enabled (localhost:56717)
2026-03-03 14:50:06 (7616): Preference change detected
2026-03-03 14:50:06 (7616): Setting CPU throttle for VM. (100%)
2026-03-03 14:50:06 (7616): Setting checkpoint interval to 1400 seconds. (Higher value of (Preference: 1400 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-03 14:50:08 (7616): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-03 14:50:08 (7616): Guest Log: BIOS: Booting from Hard Disk...
2026-03-03 14:50:11 (7616): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-03 14:50:11 (7616): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-03 14:50:11 (7616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-03 14:50:21 (7616): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-03 14:50:21 (7616): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-03 14:50:39 (7616): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.000482 main     Log opened 2026-03-03T14:50:37.022317000Z
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.000725 main     OS Product: Linux
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.000820 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.000910 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.001080 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.001085 main     Process ID: 1383
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.001088 main     Package type: LINUX_64BITS_GENERIC
2026-03-03 14:50:39 (7616): Guest Log: 00:00:00.004046 main     5.2.32 r132073 started. Verbose level = 0
2026-03-03 14:50:39 (7616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-03 14:50:39 (7616): Guest Log: [INFO] Mounting shared directory
2026-03-03 14:50:39 (7616): Guest Log: [INFO] Checking for init_data.xml
2026-03-03 14:50:47 (7616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-03 14:50:47 (7616): Guest Log: [INFO] Detected branch: prod
2026-03-03 14:50:48 (7616): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-03 14:50:48 (7616): Guest Log: Copying input files
2026-03-03 14:50:49 (7616): Guest Log: 00:00:10.008712 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 428 331 000ns (GuestNow=1 772 578 248 458 426 000 ns GuestLast=1 772 549 437 030 095 000 ns fSetTimeLastLoop=true )
2026-03-03 14:50:49 (7616): Guest Log: Copied input files into RunAtlas.
2026-03-03 14:50:49 (7616): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-03 14:50:49 (7616): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-03 14:50:49 (7616): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-03 14:50:49 (7616): Guest Log: Further information can be found at the LHC@home message board.
2026-03-03 14:50:59 (7616): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-03 14:51:00 (7616): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-03 14:51:00 (7616): Guest Log: 2.6.3.0 1666 0 32184 156859 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-03 14:51:04 (7616): Guest Log: copied the webapp to /var/www
2026-03-03 14:51:04 (7616): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-03 14:51:04 (7616): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-03 14:51:04 (7616): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-03 14:51:04 (7616): Guest Log:  *** Starting ATLAS job. (PandaID=7036088939 taskID=48849767) ***
2026-03-03 16:31:00 (7616): Status Report: Elapsed Time: '6000.786489'
2026-03-03 16:31:00 (7616): Status Report: CPU Time: '42145.359375'
2026-03-03 18:12:03 (7616): Status Report: Elapsed Time: '12000.786489'
2026-03-03 18:12:03 (7616): Status Report: CPU Time: '89966.046875'
2026-03-03 18:50:00 (7616): Guest Log:  *** Job finished ***
2026-03-03 18:50:00 (7616): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:45,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:45,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:54,008 | INFO     | [monitor] cgroup control has ended
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:54,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964711733056)>', '<ExcThread(monitor, started 139964192913152)>']
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:54,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:54,544 | INFO     | [monitor] control thread has ended
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,332 | INFO     | all workflow threads have been joined
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,333 | INFO     | end of generic workflow (traces error code: 0)
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,333 | INFO     | traces error code: 0
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,514 [wrapper] ==== pilot stdout END ====
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,519 [wrapper] ==== wrapper stdout RESUME ====
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,525 [wrapper] pilotpid: 6112
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,532 [wrapper] Pilot exit status: 0
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,666 [wrapper] pandaids: 7036088939
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,743 [wrapper] cleanup supervisor_pilot 28405 6113
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,753 [wrapper] Test setup, not cleaning
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,758 [wrapper] apfmon messages muted
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,763 [wrapper] ==== wrapper stdout END ====
2026-03-03 18:50:00 (7616): Guest Log: 2026-03-04 02:49:59,768 [wrapper] ==== wrapper stderr END ====
2026-03-03 18:50:00 (7616): Guest Log:  *** Error codes and diagnostics ***
2026-03-03 18:50:00 (7616): Guest Log:     "exeErrorCode": 0,
2026-03-03 18:50:00 (7616): Guest Log:     "exeErrorDiag": "",
2026-03-03 18:50:00 (7616): Guest Log:     "pilotErrorCode": 0,
2026-03-03 18:50:00 (7616): Guest Log:     "pilotErrorDiag": "",
2026-03-03 18:50:00 (7616): Guest Log:  *** Listing of results directory ***
2026-03-03 18:50:00 (7616): Guest Log: total 169460
2026-03-03 18:50:00 (7616): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  2 19:44 pilot3.tar.gz
2026-03-03 18:50:00 (7616): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  2 19:48 runpilot2-wrapper.sh
2026-03-03 18:50:00 (7616): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  2 19:49 queuedata.json
2026-03-03 18:50:00 (7616): Guest Log: -rwxr-xr-x. 1 atlas atlas      7818 Mar  3 22:50 init_data.xml
2026-03-03 18:50:00 (7616): Guest Log: -rwxr-xr-x. 1 atlas atlas    597960 Mar  3 22:50 input.tar.gz
2026-03-03 18:50:00 (7616): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  3 22:50 start_atlas.sh
2026-03-03 18:50:00 (7616): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  3 22:50 EVNT.48457606._000002.pool.root.1 -> /data/./ATLAS.root_0
2026-03-03 18:50:00 (7616): Guest Log: -rw-r--r--. 1 atlas atlas      2611 Mar  3 22:51 pandaJob.out
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas    998484 Mar  3 22:52 agis_schedconf.cvmfs.json
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas       419 Mar  3 22:52 workernode_map.json
2026-03-03 18:50:00 (7616): Guest Log: drwx------. 5 atlas atlas      4096 Mar  3 22:52 pilot3
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas 164807364 Mar  4 02:48 HITS.48849767._000049.pool.root.1
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas      1033 Mar  4 02:49 memory_monitor_summary.json
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas   1516092 Mar  4 02:49 agis_ddmendpoints.agis.ALL.json
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas    472399 Mar  4 02:49 log.48849767._000049.job.log.tgz.1
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas      6330 Mar  4 02:49 heartbeat.json
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas        95 Mar  4 02:49 pilot_heartbeat.json
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas      4987 Mar  4 02:49 pilotlog.txt
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas   1954039 Mar  4 02:49 log.48849767._000049.job.log.1
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas       357 Mar  4 02:49 output.list
2026-03-03 18:50:00 (7616): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  4 02:49 runtime_log
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas   2447360 Mar  4 02:49 result.tar.gz
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas       672 Mar  4 02:49 U7YMDmbQOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4bCLDmmzdUHm.diag
2026-03-03 18:50:00 (7616): Guest Log: -rw-r--r--. 1 atlas atlas      8781 Mar  4 02:49 runtime_log.err
2026-03-03 18:50:00 (7616): Guest Log: Looking for outputfile HITS.48849767._000049.pool.root.1
2026-03-03 18:50:00 (7616): Guest Log: HITS file was successfully produced
2026-03-03 18:50:00 (7616): Guest Log: -rw-------. 1 atlas atlas 164807364 Mar  4 02:48 /home/atlas/RunAtlas/HITS.48849767._000049.pool.root.1
2026-03-03 18:50:01 (7616): Guest Log: Successfully finished the ATLAS job!
2026-03-03 18:50:01 (7616): Guest Log: Copying the results back to the shared directory!
2026-03-03 18:50:02 (7616): Guest Log:  *** Contents of shared directory: ***
2026-03-03 18:50:02 (7616): Guest Log: total 400392
2026-03-03 18:50:02 (7616): Guest Log: -rwxrwxrwx. 1 root root 242118280 Mar  3 22:49 ATLAS.root_0
2026-03-03 18:50:02 (7616): Guest Log: -rwxrwxrwx. 1 root root 164807364 Mar  4 02:50 HITS.pool.root.1
2026-03-03 18:50:02 (7616): Guest Log: -rwxrwxrwx. 1 root root      7818 Mar  3 22:49 init_data.xml
2026-03-03 18:50:02 (7616): Guest Log: -rwxrwxrwx. 1 root root    597960 Mar  2 23:49 input.tar.gz
2026-03-03 18:50:02 (7616): Guest Log: -rwxrwxrwx. 1 root root   2447360 Mar  4 02:50 result.tar.gz
2026-03-03 18:50:02 (7616): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  2 23:50 start_atlas.sh
2026-03-03 18:50:02 (7616): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-03 18:50:02 (7616): VM Completion File Detected.
2026-03-03 18:50:02 (7616): Powering off VM.
2026-03-03 18:50:03 (7616): Successfully stopped VM.
2026-03-03 18:50:03 (7616): Deregistering VM. (boinc_fad081a1452ba767, slot#0)
2026-03-03 18:50:03 (7616): Removing network bandwidth throttle group from VM.
2026-03-03 18:50:03 (7616): Removing VM from VirtualBox.
2026-03-03 18:50:09 (7616): called boinc_finish(0)

</stderr_txt>
]]>

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