Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:27:16 (1541067): wrapper (7.7.26015): starting
03:27:16 (1541067): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 03:27:16] Arguments: --nthreads 12
[2026-03-03 03:27:16] Threads: 12
[2026-03-03 03:27:16] Checking for CVMFS
[2026-03-03 03:27:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 03:27:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 03:27:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 03:27:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 03:27:18] 2.13.3.0 1140029 1297 48276 156839 2 49 4121609 6144000 0 130560 0 527766 99.982 48242 860 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 03:27:18] CVMFS is ok
[2026-03-03 03:27:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 03:27:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 03:27:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 03:27:18] Further information can be found at the LHC@home message board.
[2026-03-03 03:27:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 03:27:18] Checking for apptainer binary...
[2026-03-03 03:27:18] apptainer is not installed, using version from CVMFS
[2026-03-03 03:27:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 03:27:18] ace
[2026-03-03 03:27:18] apptainer works
[2026-03-03 03:27:18] Set ATHENA_PROC_NUMBER=12
[2026-03-03 03:27:18] Set ATHENA_CORE_NUMBER=12
[2026-03-03 03:27:18] Starting ATLAS job with PandaID=7036098867
[2026-03-03 03:27:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 04:55:48]  *** The last 200 lines of the pilot log: ***
[2026-03-03 04:55:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 04:55:48]  is_altstaged=None
[2026-03-03 04:55:48]  is_tar=False
[2026-03-03 04:55:48]  lfn=log.48838447._003176.job.log.tgz.1
[2026-03-03 04:55:48]  mtime=0
[2026-03-03 04:55:48]  protocol_id=None
[2026-03-03 04:55:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 04:55:48]  replicas=None
[2026-03-03 04:55:48]  scope=mc23_13p6TeV
[2026-03-03 04:55:48]  status=None
[2026-03-03 04:55:48]  status_code=0
[2026-03-03 04:55:48]  storage_token=
[2026-03-03 04:55:48]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-7036098867/log.48838447._003176.job.log.tgz.1
[2026-03-03 04:55:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/02/log.48838447._003176.job.log.tgz.1
[2026-03-03 04:55:48]  workdir=None
[2026-03-03 04:55:48] ]
[2026-03-03 04:55:48] 2026-03-03 10:54:41,942 | INFO     | transferring file log.48838447._003176.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-7036098867/log.48838447._003176.job.log.tgz.1 to /var/lib/boinc
[2026-03-03 04:55:48] 2026-03-03 10:54:41,942 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-7036098867/log.48838447._003176.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.488384
[2026-03-03 04:55:48] 2026-03-03 10:54:41,966 | INFO     | adding to output.list: log.48838447._003176.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/02/log.48838447._003176.job.log.tg
[2026-03-03 04:55:48] 2026-03-03 10:54:41,969 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 04:55:48] 2026-03-03 10:54:41,969 | INFO     | summary of transferred files:
[2026-03-03 04:55:48] 2026-03-03 10:54:41,969 | INFO     |  -- lfn=log.48838447._003176.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 04:55:48] 2026-03-03 10:54:41,969 | INFO     | stage-out finished correctly
[2026-03-03 04:55:48] 2026-03-03 10:54:42,010 | INFO     | time since job start (5228s) is within the limit (349056.0s)
[2026-03-03 04:55:48] 2026-03-03 10:54:42,459 | INFO     | monitor loop #393: job 0:7036098867 is in state 'finished'
[2026-03-03 04:55:48] 2026-03-03 10:54:42,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 04:55:48] 2026-03-03 10:54:44,027 | INFO     | time since job start (5230s) is within the limit (349056.0s)
[2026-03-03 04:55:48] 2026-03-03 10:54:44,961 | INFO     | monitor loop #394: job 0:7036098867 is in state 'finished'
[2026-03-03 04:55:48] 2026-03-03 10:54:44,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 04:55:48] 2026-03-03 10:54:45,209 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 04:55:48] 2026-03-03 10:54:46,033 | INFO     | time since job start (5232s) is within the limit (349056.0s)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,016 | INFO     | job 7036098867 has state=finished
[2026-03-03 04:55:48] 2026-03-03 10:54:47,016 | INFO     | preparing for final server update for job 7036098867 in state='finished'
[2026-03-03 04:55:48] 2026-03-03 10:54:47,017 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036098867/jobReport.json
[2026-03-03 04:55:48] 2026-03-03 10:54:47,019 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-03 04:55:48] 2026-03-03 10:54:47,020 | INFO     | this job has now completed (state=finished)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,020 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,020 | INFO     | log transfer has been attempted: DONE
[2026-03-03 04:55:48] 2026-03-03 10:54:47,020 | INFO     | job 7036098867 has finished - writing final server update
[2026-03-03 04:55:48] 2026-03-03 10:54:47,020 | INFO     | total number of processed events: 400 (read)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,023 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036098867/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,023 | INFO     | extracted standard info from prmon json
[2026-03-03 04:55:48] 2026-03-03 10:54:47,023 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 04:55:48] 2026-03-03 10:54:47,023 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 04:55:48] 2026-03-03 10:54:47,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 04:55:48] 2026-03-03 10:54:47,024 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 04:55:48] 2026-03-03 10:54:47,025 | INFO     | fitting pss+swap vs Time
[2026-03-03 04:55:48] 2026-03-03 10:54:47,025 | INFO     | sum of square deviations: 152858680.0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,025 | INFO     | sum of deviations: -18415944652.0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | mean x: 1772532756.0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | mean y: 2975400.582278481
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | intersect: 213552282043.50906
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | chi2: 0.1159560606868533
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | current memory leak: -120.48 B/s (using 79 data points, chi2=0.12)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | could have reported an average CPU frequency of 2790 MHz (6 samples)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | ..............................
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | . Timing measurements:
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | . get job = 0 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,026 | INFO     | . initial setup = 5 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,027 | INFO     | . payload setup = 3 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,027 | INFO     | . stage-in = 0 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,027 | INFO     | . payload execution = 5208 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,027 | INFO     | . stage-out = 0 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,027 | INFO     | . log creation = 0 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,027 | INFO     | ..............................
[2026-03-03 04:55:48] 2026-03-03 10:54:47,089 | INFO     | 
[2026-03-03 04:55:48] 2026-03-03 10:54:47,089 | INFO     | job summary report
[2026-03-03 04:55:48] 2026-03-03 10:54:47,089 | INFO     | --------------------------------------------------
[2026-03-03 04:55:48] 2026-03-03 10:54:47,089 | INFO     | PanDA job id: 7036098867
[2026-03-03 04:55:48] 2026-03-03 10:54:47,089 | INFO     | task id: 48838447
[2026-03-03 04:55:48] 2026-03-03 10:54:47,089 | INFO     | errors: (none)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,089 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | pilot state: finished 
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | transexitcode: 0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | exeerrorcode: 0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | exeerrordiag: 
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | exitcode: 0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | exitmsg: OK
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | cpuconsumptiontime: 58696 s
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | nevents: 400
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | neventsw: 0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | pid: 1549783
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | pgrp: 1549783
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | corecount: 12
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | event service: False
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | sizes: {0: 2282291, 11: 2282291, 5215: 2308755, 5216: 2317767, 5220: 2317823, 5221: 2318017}
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | --------------------------------------------------
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | 
[2026-03-03 04:55:48] 2026-03-03 10:54:47,090 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | job 7036098867 has completed (purged errors)
[2026-03-03 04:55:48] 2026-03-03 10:54:47,118 | INFO     | overall cleanup function is called
[2026-03-03 04:55:48] 2026-03-03 10:54:48,126 | INFO     | --- collectZombieJob: --- 10, [1549783]
[2026-03-03 04:55:48] 2026-03-03 10:54:48,127 | INFO     | zombie collector waiting for pid 1549783
[2026-03-03 04:55:48] 2026-03-03 10:54:48,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 04:55:48] 2026-03-03 10:54:48,127 | INFO     | collected zombie processes
[2026-03-03 04:55:48] 2026-03-03 10:54:48,127 | INFO     | will attempt to kill all subprocesses of pid=1549783
[2026-03-03 04:55:48] 2026-03-03 10:54:48,223 | INFO     | process IDs to be killed: [1549783] (in reverse order)
[2026-03-03 04:55:48] 2026-03-03 10:54:48,282 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 04:55:48] 2026-03-03 10:54:48,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 04:55:48] 2026-03-03 10:54:48,288 | INFO     | did not find any defunct processes belonging to 1549783
[2026-03-03 04:55:48] 2026-03-03 10:54:48,292 | INFO     | did not find any defunct processes belonging to 1549783
[2026-03-03 04:55:48] 2026-03-03 10:54:48,292 | INFO     | ready for new job
[2026-03-03 04:55:48] 2026-03-03 10:54:48,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 04:55:48] 2026-03-03 10:54:48,294 | INFO     | **************************************
[2026-03-03 04:55:48] 2026-03-03 10:54:48,294 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 04:55:48] 2026-03-03 10:54:48,294 | INFO     | **************************************
[2026-03-03 04:55:48] 2026-03-03 10:54:48,294 | INFO     | 
[2026-03-03 04:55:48] 2026-03-03 10:54:48,295 | INFO     | architecture information:
[2026-03-03 04:55:48] 2026-03-03 10:54:48,295 | INFO     | executing command: cat /etc/os-release
[2026-03-03 04:55:48] 2026-03-03 10:54:48,315 | INFO     | cat /etc/os-release:
[2026-03-03 04:55:48] NAME="CentOS Linux"
[2026-03-03 04:55:48] VERSION="7 (Core)"
[2026-03-03 04:55:48] ID="centos"
[2026-03-03 04:55:48] ID_LIKE="rhel fedora"
[2026-03-03 04:55:48] VERSION_ID="7"
[2026-03-03 04:55:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 04:55:48] ANSI_COLOR="0;31"
[2026-03-03 04:55:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 04:55:48] HOME_URL="https://www.centos.org/"
[2026-03-03 04:55:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 04:55:48] 
[2026-03-03 04:55:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 04:55:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 04:55:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 04:55:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 04:55:48] 
[2026-03-03 04:55:48] 2026-03-03 10:54:48,316 | INFO     | **************************************
[2026-03-03 04:55:48] 2026-03-03 10:54:48,819 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-03 04:55:48] 2026-03-03 10:54:48,840 | INFO     | sufficient remaining disk space (12841910272 B)
[2026-03-03 04:55:48] 2026-03-03 10:54:48,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 04:55:48] 2026-03-03 10:54:48,841 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 04:55:48] 2026-03-03 10:54:48,842 | INFO     | update_server=False
[2026-03-03 04:55:48] 2026-03-03 10:54:48,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 04:55:48] 2026-03-03 10:54:48,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 04:55:48] 2026-03-03 10:54:48,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 04:55:48] 2026-03-03 10:54:48,843 | INFO     | aborting loop
[2026-03-03 04:55:48] 2026-03-03 10:54:49,152 | INFO     | all job control threads have been joined
[2026-03-03 04:55:48] 2026-03-03 10:54:49,823 | INFO     | all data control threads have been joined
[2026-03-03 04:55:48] 2026-03-03 10:54:49,845 | INFO     | [job] queue monitor thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:49,845 | INFO     | [job] job monitor thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:49,847 | INFO     | [job] retrieve thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:50,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 04:55:48] 2026-03-03 10:54:50,157 | INFO     | [job] control thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:50,169 | INFO     | [data] copytool_in thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:50,253 | INFO     | all payload control threads have been joined
[2026-03-03 04:55:48] 2026-03-03 10:54:50,473 | INFO     | [payload] failed_post thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:50,545 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:50,829 | INFO     | [data] control thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:51,105 | INFO     | [job] validate thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:51,207 | INFO     | [payload] validate_post thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:51,223 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:51,257 | INFO     | [payload] control thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:51,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 04:55:48] 2026-03-03 10:54:51,340 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:52,049 | INFO     | [data] copytool_out thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:55,279 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:54:59,897 | INFO     | job.realtimelogging is not enabled
[2026-03-03 04:55:48] 2026-03-03 10:55:00,901 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 04:55:48] 2026-03-03 10:55:19,313 | INFO     | PID=1545236 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 04:55:48] 2026-03-03 10:55:19,313 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 04:55:48] 2026-03-03 10:55:19,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 04:55:48] 2026-03-03 10:55:19,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 04:55:48] 2026-03-03 10:55:42,797 | INFO     | [monitor] cgroup control has ended
[2026-03-03 04:55:48] 2026-03-03 10:55:43,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139991606294336)>', '<ExcThread(monitor, started 139990533125888)>']
[2026-03-03 04:55:48] 2026-03-03 10:55:44,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 04:55:48] 2026-03-03 10:55:44,409 | INFO     | [monitor] control thread has ended
[2026-03-03 04:55:48] 2026-03-03 10:55:48,497 | INFO     | all workflow threads have been joined
[2026-03-03 04:55:48] 2026-03-03 10:55:48,497 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 04:55:48] 2026-03-03 10:55:48,497 | INFO     | traces error code: 0
[2026-03-03 04:55:48] 2026-03-03 10:55:48,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 04:55:48] 2026-03-03 10:55:48,781 [wrapper] ==== pilot stdout END ====
[2026-03-03 04:55:48] 2026-03-03 10:55:48,784 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 04:55:48] 2026-03-03 10:55:48,787 [wrapper] pilotpid: 1545236
[2026-03-03 04:55:48] 2026-03-03 10:55:48,790 [wrapper] Pilot exit status: 0
[2026-03-03 04:55:48] 2026-03-03 10:55:48,801 [wrapper] pandaids: 7036098867
[2026-03-03 04:55:48] 2026-03-03 10:55:48,840 [wrapper] cleanup supervisor_pilot 1567768 1545237
[2026-03-03 04:55:48] 2026-03-03 10:55:48,844 [wrapper] Test setup, not cleaning
[2026-03-03 04:55:48] 2026-03-03 10:55:48,847 [wrapper] apfmon messages muted
[2026-03-03 04:55:48] 2026-03-03 10:55:48,850 [wrapper] ==== wrapper stdout END ====
[2026-03-03 04:55:48] 2026-03-03 10:55:48,853 [wrapper] ==== wrapper stderr END ====
[2026-03-03 04:55:48]  *** Error codes and diagnostics ***
[2026-03-03 04:55:48]     "exeErrorCode": 0,
[2026-03-03 04:55:48]     "exeErrorDiag": "",
[2026-03-03 04:55:48]     "pilotErrorCode": 0,
[2026-03-03 04:55:48]     "pilotErrorDiag": "",
[2026-03-03 04:55:48]  *** Listing of results directory ***
[2026-03-03 04:55:48] total 490572
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc    584627 Mar  2 13:44 pilot3.tar.gz
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc      5111 Mar  2 13:46 queuedata.json
[2026-03-03 04:55:48] -rwx------ 1 boinc boinc     36322 Mar  2 13:46 runpilot2-wrapper.sh
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc       100 Mar  3 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 04:55:48] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 03:27 run_atlas
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc       105 Mar  3 03:27 job.xml
[2026-03-03 04:55:48] -rw-r--r-- 2 boinc boinc     15845 Mar  3 03:27 start_atlas.sh
[2026-03-03 04:55:48] drwxrwx--x 2 boinc boinc      4096 Mar  3 03:27 shared
[2026-03-03 04:55:48] -rw-r--r-- 2 boinc boinc    597964 Mar  3 03:27 input.tar.gz
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc      6987 Mar  3 03:27 init_data.xml
[2026-03-03 04:55:48] -rw-r--r-- 2 boinc boinc 280051610 Mar  3 03:27 EVNT.48220117._000132.pool.root.1
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc         0 Mar  3 03:27 boinc_lockfile
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc      2572 Mar  3 03:27 pandaJob.out
[2026-03-03 04:55:48] -rw------- 1 boinc boinc    998412 Mar  3 03:27 agis_schedconf.cvmfs.json
[2026-03-03 04:55:48] -rw------- 1 boinc boinc   1512931 Mar  3 03:27 agis_ddmendpoints.agis.ALL.json
[2026-03-03 04:55:48] -rw------- 1 boinc boinc       420 Mar  3 03:27 workernode_map.json
[2026-03-03 04:55:48] drwx------ 5 boinc boinc      4096 Mar  3 03:27 pilot3
[2026-03-03 04:55:48] -rw------- 1 boinc boinc 216071765 Mar  3 04:54 HITS.48838447._003176.pool.root.1
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc       529 Mar  3 04:54 boinc_task_state.xml
[2026-03-03 04:55:48] -rw------- 1 boinc boinc      1019 Mar  3 04:54 memory_monitor_summary.json
[2026-03-03 04:55:48] -rw------- 1 boinc boinc    392083 Mar  3 04:54 log.48838447._003176.job.log.tgz.1
[2026-03-03 04:55:48] -rw------- 1 boinc boinc      6303 Mar  3 04:54 heartbeat.json
[2026-03-03 04:55:48] -rw------- 1 boinc boinc        95 Mar  3 04:54 pilot_heartbeat.json
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc        27 Mar  3 04:55 wrapper_checkpoint.txt
[2026-03-03 04:55:48] -rw------- 1 boinc boinc      4823 Mar  3 04:55 pilotlog.txt
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc      8192 Mar  3 04:55 boinc_mmap_file
[2026-03-03 04:55:48] -rw------- 1 boinc boinc    756787 Mar  3 04:55 log.48838447._003176.job.log.1
[2026-03-03 04:55:48] -rw------- 1 boinc boinc       357 Mar  3 04:55 output.list
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc       620 Mar  3 04:55 runtime_log
[2026-03-03 04:55:48] -rw------- 1 boinc boinc   1167360 Mar  3 04:55 result.tar.gz
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc      8867 Mar  3 04:55 runtime_log.err
[2026-03-03 04:55:48] -rw------- 1 boinc boinc       637 Mar  3 04:55 jgLNDm7OOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWWCLDmLPfTMo.diag
[2026-03-03 04:55:48] -rw-r--r-- 1 boinc boinc     21563 Mar  3 04:55 stderr.txt
[2026-03-03 04:55:48] HITS file was successfully produced:
[2026-03-03 04:55:48] -rw------- 1 boinc boinc 216071765 Mar  3 04:54 shared/HITS.pool.root.1
[2026-03-03 04:55:48]  *** Contents of shared directory: ***
[2026-03-03 04:55:48] total 486244
[2026-03-03 04:55:48] -rw-r--r-- 2 boinc boinc     15845 Mar  3 03:27 start_atlas.sh
[2026-03-03 04:55:48] -rw-r--r-- 2 boinc boinc    597964 Mar  3 03:27 input.tar.gz
[2026-03-03 04:55:48] -rw-r--r-- 2 boinc boinc 280051610 Mar  3 03:27 ATLAS.root_0
[2026-03-03 04:55:48] -rw------- 1 boinc boinc 216071765 Mar  3 04:54 HITS.pool.root.1
[2026-03-03 04:55:48] -rw------- 1 boinc boinc   1167360 Mar  3 04:55 result.tar.gz
04:55:50 (1541067): run_atlas exited; CPU time 58765.411659
04:55:50 (1541067): called boinc_finish(0)

</stderr_txt>
]]>

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