Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:26:16 (401773): wrapper (7.7.26015): starting
07:26:16 (401773): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 07:26:16] Arguments: --nthreads 4
[2026-03-04 07:26:16] Threads: 4
[2026-03-04 07:26:16] Checking for CVMFS
[2026-03-04 07:26:16] No cvmfs_config command found, will try listing directly
[2026-03-04 07:26:16] CVMFS is ok
[2026-03-04 07:26:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 07:26:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 07:26:16] Further information can be found at the LHC@home message board.
[2026-03-04 07:26:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:26:16] Checking for apptainer binary...
[2026-03-04 07:26:16] which: no apptainer in ((null))
[2026-03-04 07:26:16] apptainer is not installed, using version from CVMFS
[2026-03-04 07:26:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:26:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-04 07:26:16] apptainer works
[2026-03-04 07:26:16] Set ATHENA_PROC_NUMBER=4
[2026-03-04 07:26:16] Set ATHENA_CORE_NUMBER=4
[2026-03-04 07:26:16] Starting ATLAS job with PandaID=7036098771
[2026-03-04 07:26:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 09:21:53]  *** The last 200 lines of the pilot log: ***
[2026-03-04 09:21:53] 2026-03-04 08:12:06,488 | INFO     | job 7036098771 has finished - writing final server update
[2026-03-04 09:21:53] 2026-03-04 08:12:06,488 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_546897/.job.ad'
[2026-03-04 09:21:53] 2026-03-04 08:12:06,488 | INFO     | total number of processed events: 400 (read)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,506 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7036098771/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,506 | INFO     | extracted standard info from prmon json
[2026-03-04 09:21:53] 2026-03-04 08:12:06,506 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 09:21:53] 2026-03-04 08:12:06,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 09:21:53] 2026-03-04 08:12:06,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 09:21:53] 2026-03-04 08:12:06,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 09:21:53] 2026-03-04 08:12:06,508 | INFO     | fitting pss+swap vs Time
[2026-03-04 09:21:53] 2026-03-04 08:12:06,508 | INFO     | sum of square deviations: 348769330.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,508 | INFO     | sum of deviations: 10651101969.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,508 | INFO     | mean x: 1772608750.5
[2026-03-04 09:21:53] 2026-03-04 08:12:06,508 | INFO     | mean y: 2324850.596153846
[2026-03-04 09:21:53] 2026-03-04 08:12:06,508 | INFO     | intersect: -54131553700.93009
[2026-03-04 09:21:53] 2026-03-04 08:12:06,508 | INFO     | chi2: 1.112612493700555
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | sum of square deviations: 300842850.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | sum of deviations: 10111221468.999998
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | mean x: 1772608598.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | mean y: 2323130.797979798
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | intersect: -59574423041.60261
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | chi2: 1.1143820286225652
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | current chi2=1.1143820286225652 (change=-0.15904323670900633 %)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | right removable region: 98
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | sum of square deviations: 300842850.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | sum of deviations: 524104069.9999993
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | mean x: 1772608903.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | mean y: 2356088.8383838385
[2026-03-04 09:21:53] 2026-03-04 08:12:06,509 | INFO     | intersect: -3085739707.955637
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | chi2: 0.0005744730110972956
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | current chi2=0.0005744730110972956 (change=99.94836719753285 %)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | sum of square deviations: 257521107.5
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | sum of deviations: 240437539.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | mean x: 1772609055.5
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | mean y: 2357075.6170212766
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | intersect: -1652659723.0099976
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | chi2: 0.00029850576069239044
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | current chi2=0.00029850576069239044 (change=48.038331666405476 %)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | sum of square deviations: 218571540.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | sum of deviations: 106821369.99999994
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | mean x: 1772609208.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,510 | INFO     | mean y: 2357599.0224719103
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | intersect: -863960788.4179736
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | chi2: 0.00024653042520606465
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | current chi2=0.00024653042520606465 (change=17.41183666464858 %)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | left removable region: 30
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | sum of square deviations: 97479037.0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | sum of deviations: 106429963.5
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | mean x: 1772609482.5
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | mean y: 2357316.779411765
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | intersect: -1933020466.263612
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | chi2: 0.00020491216755945114
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | current memory leak: 1.09 B/s (using 68 data points, chi2=0.00)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | could have reported an average CPU frequency of 3599 MHz (7 samples)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | ..............................
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | . Timing measurements:
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | . get job = 0 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,511 | INFO     | . initial setup = 4 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,512 | INFO     | . payload setup = 4 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,512 | INFO     | . stage-in = 0 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,512 | INFO     | . payload execution = 6314 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,512 | INFO     | . stage-out = 0 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,512 | INFO     | . log creation = 0 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,512 | INFO     | ..............................
[2026-03-04 09:21:53] 2026-03-04 08:12:06,555 | INFO     | 
[2026-03-04 09:21:53] 2026-03-04 08:12:06,555 | INFO     | job summary report
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | --------------------------------------------------
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | PanDA job id: 7036098771
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | task id: 48838447
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | errors: (none)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | pilot state: finished 
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | transexitcode: 0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | exeerrorcode: 0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | exeerrordiag: 
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | exitcode: 0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | exitmsg: OK
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | cpuconsumptiontime: 22802 s
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | nevents: 400
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | neventsw: 0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | pid: 412244
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | pgrp: 412244
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | corecount: 4
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | event service: False
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | sizes: {0: 2286662, 1: 2287123, 11: 2287123, 6323: 2314372, 6324: 2323394, 6325: 2323450, 6327: 2323772}
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | --------------------------------------------------
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | 
[2026-03-04 09:21:53] 2026-03-04 08:12:06,556 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot196/slots/0
[2026-03-04 09:21:53] 2026-03-04 08:12:06,573 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,573 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,573 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,573 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | job 7036098771 has completed (purged errors)
[2026-03-04 09:21:53] 2026-03-04 08:12:06,574 | INFO     | overall cleanup function is called
[2026-03-04 09:21:53] 2026-03-04 08:12:07,581 | INFO     | --- collectZombieJob: --- 10, [412244]
[2026-03-04 09:21:53] 2026-03-04 08:12:07,581 | INFO     | zombie collector waiting for pid 412244
[2026-03-04 09:21:53] 2026-03-04 08:12:07,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 09:21:53] 2026-03-04 08:12:07,581 | INFO     | collected zombie processes
[2026-03-04 09:21:53] 2026-03-04 08:12:07,581 | INFO     | will attempt to kill all subprocesses of pid=412244
[2026-03-04 09:21:53] 2026-03-04 08:12:08,070 | INFO     | process IDs to be killed: [412244] (in reverse order)
[2026-03-04 09:21:53] 2026-03-04 08:12:08,369 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 09:21:53] 2026-03-04 08:12:08,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 09:21:53] 2026-03-04 08:12:08,400 | INFO     | did not find any defunct processes belonging to 412244
[2026-03-04 09:21:53] 2026-03-04 08:12:08,436 | INFO     | did not find any defunct processes belonging to 412244
[2026-03-04 09:21:53] 2026-03-04 08:12:08,437 | INFO     | ready for new job
[2026-03-04 09:21:53] 2026-03-04 08:12:08,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 09:21:53] 2026-03-04 08:12:08,438 | INFO     | **************************************
[2026-03-04 09:21:53] 2026-03-04 08:12:08,438 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 09:21:53] 2026-03-04 08:12:08,439 | INFO     | **************************************
[2026-03-04 09:21:53] 2026-03-04 08:12:08,439 | INFO     | 
[2026-03-04 09:21:53] 2026-03-04 08:12:08,445 | INFO     | architecture information:
[2026-03-04 09:21:53] 2026-03-04 08:12:08,445 | INFO     | executing command: cat /etc/os-release
[2026-03-04 09:21:53] 2026-03-04 08:12:08,459 | INFO     | cat /etc/os-release:
[2026-03-04 09:21:53] NAME="CentOS Linux"
[2026-03-04 09:21:53] VERSION="7 (Core)"
[2026-03-04 09:21:53] ID="centos"
[2026-03-04 09:21:53] ID_LIKE="rhel fedora"
[2026-03-04 09:21:53] VERSION_ID="7"
[2026-03-04 09:21:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 09:21:53] ANSI_COLOR="0;31"
[2026-03-04 09:21:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 09:21:53] HOME_URL="https://www.centos.org/"
[2026-03-04 09:21:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 09:21:53] 
[2026-03-04 09:21:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 09:21:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 09:21:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 09:21:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 09:21:53] 
[2026-03-04 09:21:53] 2026-03-04 08:12:08,459 | INFO     | **************************************
[2026-03-04 09:21:53] 2026-03-04 08:12:08,962 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-04 09:21:53] 2026-03-04 08:12:08,980 | INFO     | sufficient remaining disk space (22392340480 B)
[2026-03-04 09:21:53] 2026-03-04 08:12:08,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 09:21:53] 2026-03-04 08:12:08,980 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 09:21:53] 2026-03-04 08:12:08,980 | INFO     | update_server=False
[2026-03-04 09:21:53] 2026-03-04 08:12:08,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 09:21:53] 2026-03-04 08:12:08,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:21:53] 2026-03-04 08:12:08,981 | INFO     | aborting loop
[2026-03-04 09:21:53] 2026-03-04 08:12:08,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 09:21:53] 2026-03-04 08:12:08,987 | INFO     | all data control threads have been joined
[2026-03-04 09:21:53] 2026-03-04 08:12:09,392 | INFO     | all payload control threads have been joined
[2026-03-04 09:21:53] 2026-03-04 08:12:09,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 09:21:53] 2026-03-04 08:12:09,985 | INFO     | [job] retrieve thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:09,986 | INFO     | [job] job monitor thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:09,992 | INFO     | [data] control thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,397 | INFO     | [payload] control thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,508 | INFO     | all job control threads have been joined
[2026-03-04 09:21:53] 2026-03-04 08:12:10,657 | INFO     | [job] validate thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,765 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,877 | INFO     | [data] copytool_in thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,890 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,919 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,928 | INFO     | [payload] failed_post thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:10,989 | INFO     | [data] copytool_out thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:11,273 | INFO     | [payload] validate_post thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:11,513 | INFO     | [job] control thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:11,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:21:53] 2026-03-04 08:12:12,570 | INFO     | [job] queue monitor thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:13,910 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:19,572 | INFO     | job.realtimelogging is not enabled
[2026-03-04 09:21:53] 2026-03-04 08:12:20,577 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 09:21:53] 2026-03-04 08:12:38,825 | INFO     | [monitor] cgroup control has ended
[2026-03-04 09:21:53] 2026-03-04 08:12:39,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23036706064192)>', '<ExcThread(monitor, started 23036467361536)>']
[2026-03-04 09:21:53] 2026-03-04 08:12:39,252 | INFO     | PID=406332 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 09:21:53] 2026-03-04 08:12:39,252 | INFO     | .. there are 45 such processes running
[2026-03-04 09:21:53] 2026-03-04 08:12:39,253 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 09:21:53] 2026-03-04 08:12:39,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 09:21:53] 2026-03-04 08:12:39,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 09:21:53] 2026-03-04 08:12:39,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 09:21:53] 2026-03-04 08:12:39,253 | INFO     | [monitor] control thread has ended
[2026-03-04 09:21:53] 2026-03-04 08:12:44,055 | INFO     | all workflow threads have been joined
[2026-03-04 09:21:53] 2026-03-04 08:12:44,055 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 09:21:53] 2026-03-04 08:12:44,055 | INFO     | traces error code: 0
[2026-03-04 09:21:53] 2026-03-04 08:12:44,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 09:21:53] 2026-03-04 08:12:44,272 [wrapper] ==== pilot stdout END ====
[2026-03-04 09:21:53] 2026-03-04 08:12:44,274 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 09:21:53] 2026-03-04 08:12:44,277 [wrapper] pilotpid: 406332
[2026-03-04 09:21:53] 2026-03-04 08:12:44,279 [wrapper] Pilot exit status: 0
[2026-03-04 09:21:53] 2026-03-04 08:12:44,289 [wrapper] pandaids: 7036098771
[2026-03-04 09:21:53] 2026-03-04 08:12:44,425 [wrapper] cleanup supervisor_pilot 1179184 406333
[2026-03-04 09:21:53] 2026-03-04 08:12:44,427 [wrapper] Test setup, not cleaning
[2026-03-04 09:21:53] 2026-03-04 08:12:44,429 [wrapper] apfmon messages muted
[2026-03-04 09:21:53] 2026-03-04 08:12:44,431 [wrapper] ==== wrapper stdout END ====
[2026-03-04 09:21:53] 2026-03-04 08:12:44,433 [wrapper] ==== wrapper stderr END ====
[2026-03-04 09:21:53]  *** Error codes and diagnostics ***
[2026-03-04 09:21:53]     "exeErrorCode": 0,
[2026-03-04 09:21:53]     "exeErrorDiag": "",
[2026-03-04 09:21:53]     "pilotErrorCode": 0,
[2026-03-04 09:21:53]     "pilotErrorDiag": "",
[2026-03-04 09:21:53]  *** Listing of results directory ***
[2026-03-04 09:21:53] total 493196
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc    584627 Mar  2 20:44 pilot3.tar.gz
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc      5111 Mar  2 20:46 queuedata.json
[2026-03-04 09:21:53] -rwx------. 1 boinc boinc     36322 Mar  2 20:46 runpilot2-wrapper.sh
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc       100 Mar  4 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 09:21:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 07:26 run_atlas
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc       105 Mar  4 07:26 job.xml
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc      6708 Mar  4 07:26 init_data.xml
[2026-03-04 09:21:53] -rw-r--r--. 2 boinc boinc 281633680 Mar  4 07:26 EVNT.48220117._000128.pool.root.1
[2026-03-04 09:21:53] -rw-r--r--. 2 boinc boinc    597957 Mar  4 07:26 input.tar.gz
[2026-03-04 09:21:53] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:26 start_atlas.sh
[2026-03-04 09:21:53] drwxrwx--x. 2 boinc boinc      4096 Mar  4 07:26 shared
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc         0 Mar  4 07:26 boinc_lockfile
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc      2572 Mar  4 07:26 pandaJob.out
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc    997749 Mar  4 07:26 agis_schedconf.cvmfs.json
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc   1516092 Mar  4 07:26 agis_ddmendpoints.agis.ALL.json
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc       445 Mar  4 07:26 workernode_map.json
[2026-03-04 09:21:53] drwx------. 5 boinc boinc      4096 Mar  4 07:26 pilot3
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc 217082995 Mar  4 09:11 HITS.48838447._003080.pool.root.1
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc      1031 Mar  4 09:11 memory_monitor_summary.json
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc       530 Mar  4 09:12 boinc_task_state.xml
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc    291179 Mar  4 09:12 log.48838447._003080.job.log.tgz.1
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc      6348 Mar  4 09:12 heartbeat.json
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc        95 Mar  4 09:12 pilot_heartbeat.json
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc      4901 Mar  4 09:12 pilotlog.txt
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc    900345 Mar  4 09:12 log.48838447._003080.job.log.1
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc       357 Mar  4 09:12 output.list
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc       620 Mar  4 09:12 runtime_log
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc   1208320 Mar  4 09:12 result.tar.gz
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc      9221 Mar  4 09:12 runtime_log.err
[2026-03-04 09:21:53] -rw-------. 1 boinc boinc       662 Mar  4 09:12 b6ZKDm7OOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNVCLDmkS3fcn.diag
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc        27 Mar  4 09:21 wrapper_checkpoint.txt
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc      8192 Mar  4 09:21 boinc_mmap_file
[2026-03-04 09:21:53] -rw-r--r--. 1 boinc boinc     20889 Mar  4 09:21 stderr.txt
[2026-03-04 09:21:54] HITS file was successfully produced:
[2026-03-04 09:21:54] -rw-------. 1 boinc boinc 217082995 Mar  4 09:11 shared/HITS.pool.root.1
[2026-03-04 09:21:54]  *** Contents of shared directory: ***
[2026-03-04 09:21:54] total 488820
[2026-03-04 09:21:54] -rw-r--r--. 2 boinc boinc 281633680 Mar  4 07:26 ATLAS.root_0
[2026-03-04 09:21:54] -rw-r--r--. 2 boinc boinc    597957 Mar  4 07:26 input.tar.gz
[2026-03-04 09:21:54] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:26 start_atlas.sh
[2026-03-04 09:21:54] -rw-------. 1 boinc boinc 217082995 Mar  4 09:11 HITS.pool.root.1
[2026-03-04 09:21:54] -rw-------. 1 boinc boinc   1208320 Mar  4 09:12 result.tar.gz
09:21:55 (401773): run_atlas exited; CPU time 23105.184393
09:21:55 (401773): called boinc_finish(0)

</stderr_txt>
]]>

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