Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:37 (3159924): wrapper (7.7.26015): starting
21:41:37 (3159924): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 21:41:37] Arguments: --nthreads 4
[2026-03-04 21:41:37] Threads: 4
[2026-03-04 21:41:37] Checking for CVMFS
[2026-03-04 21:41:37] No cvmfs_config command found, will try listing directly
[2026-03-04 21:41:37] CVMFS is ok
[2026-03-04 21:41:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 21:41:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 21:41:37] Further information can be found at the LHC@home message board.
[2026-03-04 21:41:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 21:41:37] Checking for apptainer binary...
[2026-03-04 21:41:37] which: no apptainer in ((null))
[2026-03-04 21:41:37] apptainer is not installed, using version from CVMFS
[2026-03-04 21:41:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 21:41:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-04 21:41:37] apptainer works
[2026-03-04 21:41:37] Set ATHENA_PROC_NUMBER=4
[2026-03-04 21:41:37] Set ATHENA_CORE_NUMBER=4
[2026-03-04 21:41:37] Starting ATLAS job with PandaID=7035862979
[2026-03-04 21:41:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 23:44:10]  *** The last 200 lines of the pilot log: ***
[2026-03-04 23:44:10] 2026-03-04 22:43:10,297 | INFO     | job 7035862979 has state=finished
[2026-03-04 23:44:10] 2026-03-04 22:43:10,297 | INFO     | preparing for final server update for job 7035862979 in state='finished'
[2026-03-04 23:44:10] 2026-03-04 22:43:10,298 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7035862979/jobReport.json
[2026-03-04 23:44:10] 2026-03-04 22:43:10,299 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/2/workernode_map.json
[2026-03-04 23:44:10] 2026-03-04 22:43:10,299 | INFO     | this job has now completed (state=finished)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,300 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,300 | INFO     | log transfer has been attempted: DONE
[2026-03-04 23:44:10] 2026-03-04 22:43:10,300 | INFO     | job 7035862979 has finished - writing final server update
[2026-03-04 23:44:10] 2026-03-04 22:43:10,300 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4081809/.job.ad'
[2026-03-04 23:44:10] 2026-03-04 22:43:10,300 | INFO     | total number of processed events: 400 (read)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,318 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7035862979/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,319 | INFO     | extracted standard info from prmon json
[2026-03-04 23:44:10] 2026-03-04 22:43:10,319 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 23:44:10] 2026-03-04 22:43:10,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 23:44:10] 2026-03-04 22:43:10,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 23:44:10] 2026-03-04 22:43:10,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | fitting pss+swap vs Time
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | sum of square deviations: 522502820.0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | sum of deviations: 12740021653.999998
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | mean x: 1772660538.0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | mean y: 2315243.1092436975
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | intersect: -43219908206.92168
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | chi2: 1.1106410297193106
[2026-03-04 23:44:10] 2026-03-04 22:43:10,321 | INFO     | sum of square deviations: 459366752.5
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | sum of deviations: 12154011032.5
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | mean x: 1772660385.5
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | mean y: 2313826.8333333335
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | intersect: -46899064570.68729
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | chi2: 1.1119772779443569
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | current chi2=1.1119772779443569 (change=-0.12031324156861069 %)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | right removable region: 113
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | sum of square deviations: 459366752.5
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | sum of deviations: 795288445.5000001
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | mean x: 1772660690.5
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | mean y: 2343367.7807017546
[2026-03-04 23:44:10] 2026-03-04 22:43:10,322 | INFO     | intersect: -3066613097.3407087
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | chi2: 0.00028183292310916445
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | current chi2=0.00028183292310916445 (change=99.97462430114072 %)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | sum of square deviations: 401533110.0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | sum of deviations: 578481909.9999999
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | mean x: 1772660843.0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | mean y: 2343936.119266055
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | intersect: -2551498336.665785
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | chi2: 0.0002237419510745837
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | current chi2=0.0002237419510745837 (change=20.611847400127886 %)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | left removable region: 20
[2026-03-04 23:44:10] 2026-03-04 22:43:10,323 | INFO     | sum of square deviations: 249388862.0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | sum of deviations: 466222451.00000006
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | mean x: 1772660965.0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | mean y: 2343869.3870967743
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | intersect: -3311574536.0560675
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | chi2: 0.00019161840301031548
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | current memory leak: 1.87 B/s (using 93 data points, chi2=0.00)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | could have reported an average CPU frequency of 3575 MHz (8 samples)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | ..............................
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | . Timing measurements:
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | . get job = 0 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | . initial setup = 5 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | . payload setup = 9 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | . stage-in = 0 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,324 | INFO     | . payload execution = 7248 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,325 | INFO     | . stage-out = 0 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,325 | INFO     | . log creation = 0 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,325 | INFO     | ..............................
[2026-03-04 23:44:10] 2026-03-04 22:43:10,376 | INFO     | 
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | job summary report
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | --------------------------------------------------
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | PanDA job id: 7035862979
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | task id: 48753942
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | errors: (none)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | pilot state: finished 
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | transexitcode: 0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | exeerrorcode: 0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | exeerrordiag: 
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | exitcode: 0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | exitmsg: OK
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | cpuconsumptiontime: 27908 s
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | nevents: 400
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | neventsw: 0
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | pid: 3170496
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | pgrp: 3170496
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | corecount: 4
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | event service: False
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | sizes: {0: 2295366, 1: 2295827, 11: 2295827, 7261: 2323207, 7263: 2332227, 7265: 2332283, 7267: 2332605}
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | --------------------------------------------------
[2026-03-04 23:44:10] 2026-03-04 22:43:10,377 | INFO     | 
[2026-03-04 23:44:10] 2026-03-04 22:43:10,378 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/2
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | job 7035862979 has completed (purged errors)
[2026-03-04 23:44:10] 2026-03-04 22:43:10,396 | INFO     | overall cleanup function is called
[2026-03-04 23:44:10] 2026-03-04 22:43:11,403 | INFO     | --- collectZombieJob: --- 10, [3170496]
[2026-03-04 23:44:10] 2026-03-04 22:43:11,403 | INFO     | zombie collector waiting for pid 3170496
[2026-03-04 23:44:10] 2026-03-04 22:43:11,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 23:44:10] 2026-03-04 22:43:11,403 | INFO     | collected zombie processes
[2026-03-04 23:44:10] 2026-03-04 22:43:11,403 | INFO     | will attempt to kill all subprocesses of pid=3170496
[2026-03-04 23:44:10] 2026-03-04 22:43:11,887 | INFO     | process IDs to be killed: [3170496] (in reverse order)
[2026-03-04 23:44:10] 2026-03-04 22:43:12,113 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 23:44:10] 2026-03-04 22:43:12,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 23:44:10] 2026-03-04 22:43:12,143 | INFO     | did not find any defunct processes belonging to 3170496
[2026-03-04 23:44:10] 2026-03-04 22:43:12,172 | INFO     | did not find any defunct processes belonging to 3170496
[2026-03-04 23:44:10] 2026-03-04 22:43:12,172 | INFO     | ready for new job
[2026-03-04 23:44:10] 2026-03-04 22:43:12,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 23:44:10] 2026-03-04 22:43:12,174 | INFO     | **************************************
[2026-03-04 23:44:10] 2026-03-04 22:43:12,174 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 23:44:10] 2026-03-04 22:43:12,174 | INFO     | **************************************
[2026-03-04 23:44:10] 2026-03-04 22:43:12,174 | INFO     | 
[2026-03-04 23:44:10] 2026-03-04 22:43:12,180 | INFO     | architecture information:
[2026-03-04 23:44:10] 2026-03-04 22:43:12,181 | INFO     | executing command: cat /etc/os-release
[2026-03-04 23:44:10] 2026-03-04 22:43:12,195 | INFO     | cat /etc/os-release:
[2026-03-04 23:44:10] NAME="CentOS Linux"
[2026-03-04 23:44:10] VERSION="7 (Core)"
[2026-03-04 23:44:10] ID="centos"
[2026-03-04 23:44:10] ID_LIKE="rhel fedora"
[2026-03-04 23:44:10] VERSION_ID="7"
[2026-03-04 23:44:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 23:44:10] ANSI_COLOR="0;31"
[2026-03-04 23:44:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 23:44:10] HOME_URL="https://www.centos.org/"
[2026-03-04 23:44:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 23:44:10] 
[2026-03-04 23:44:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 23:44:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 23:44:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 23:44:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 23:44:10] 
[2026-03-04 23:44:10] 2026-03-04 22:43:12,195 | INFO     | **************************************
[2026-03-04 23:44:10] 2026-03-04 22:43:12,698 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-03-04 23:44:10] 2026-03-04 22:43:12,714 | INFO     | sufficient remaining disk space (20558381056 B)
[2026-03-04 23:44:10] 2026-03-04 22:43:12,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 23:44:10] 2026-03-04 22:43:12,715 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 23:44:10] 2026-03-04 22:43:12,715 | INFO     | update_server=False
[2026-03-04 23:44:10] 2026-03-04 22:43:12,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 23:44:10] 2026-03-04 22:43:12,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 23:44:10] 2026-03-04 22:43:12,715 | INFO     | aborting loop
[2026-03-04 23:44:10] 2026-03-04 22:43:13,095 | INFO     | all data control threads have been joined
[2026-03-04 23:44:10] 2026-03-04 22:43:13,337 | INFO     | all payload control threads have been joined
[2026-03-04 23:44:10] 2026-03-04 22:43:13,720 | INFO     | [job] job monitor thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:13,721 | INFO     | [job] retrieve thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:13,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 23:44:10] 2026-03-04 22:43:13,908 | INFO     | all job control threads have been joined
[2026-03-04 23:44:10] 2026-03-04 22:43:13,909 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:14,078 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:14,098 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:14,101 | INFO     | [data] control thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:14,240 | INFO     | [data] copytool_in thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:14,342 | INFO     | [payload] control thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:14,572 | INFO     | [payload] validate_post thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:14,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 23:44:10] 2026-03-04 22:43:14,913 | INFO     | [job] control thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:15,177 | INFO     | [job] validate thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:15,319 | INFO     | [payload] failed_post thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:15,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 23:44:10] 2026-03-04 22:43:15,903 | INFO     | [data] copytool_out thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:16,393 | INFO     | [job] queue monitor thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:18,605 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:22,955 | INFO     | job.realtimelogging is not enabled
[2026-03-04 23:44:10] 2026-03-04 22:43:23,960 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 23:44:10] 2026-03-04 22:43:42,923 | INFO     | PID=3164473 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 23:44:10] 2026-03-04 22:43:42,923 | INFO     | .. there are 49 such processes running
[2026-03-04 23:44:10] 2026-03-04 22:43:42,923 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 23:44:10] 2026-03-04 22:43:42,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 23:44:10] 2026-03-04 22:43:42,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 23:44:10] 2026-03-04 22:44:04,164 | INFO     | [monitor] cgroup control has ended
[2026-03-04 23:44:10] 2026-03-04 22:44:05,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22948046018368)>', '<ExcThread(monitor, started 22947741824768)>']
[2026-03-04 23:44:10] 2026-03-04 22:44:06,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 23:44:10] 2026-03-04 22:44:06,038 | INFO     | [monitor] control thread has ended
[2026-03-04 23:44:10] 2026-03-04 22:44:10,517 | INFO     | all workflow threads have been joined
[2026-03-04 23:44:10] 2026-03-04 22:44:10,517 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 23:44:10] 2026-03-04 22:44:10,517 | INFO     | traces error code: 0
[2026-03-04 23:44:10] 2026-03-04 22:44:10,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 23:44:10] 2026-03-04 22:44:10,649 [wrapper] ==== pilot stdout END ====
[2026-03-04 23:44:10] 2026-03-04 22:44:10,651 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 23:44:10] 2026-03-04 22:44:10,654 [wrapper] pilotpid: 3164473
[2026-03-04 23:44:10] 2026-03-04 22:44:10,656 [wrapper] Pilot exit status: 0
[2026-03-04 23:44:10] 2026-03-04 22:44:10,665 [wrapper] pandaids: 7035862979
[2026-03-04 23:44:10] 2026-03-04 22:44:10,796 [wrapper] cleanup supervisor_pilot   99105 3164474
[2026-03-04 23:44:10] 2026-03-04 22:44:10,799 [wrapper] Test setup, not cleaning
[2026-03-04 23:44:10] 2026-03-04 22:44:10,802 [wrapper] apfmon messages muted
[2026-03-04 23:44:10] 2026-03-04 22:44:10,804 [wrapper] ==== wrapper stdout END ====
[2026-03-04 23:44:10] 2026-03-04 22:44:10,808 [wrapper] ==== wrapper stderr END ====
[2026-03-04 23:44:10]  *** Error codes and diagnostics ***
[2026-03-04 23:44:10]     "exeErrorCode": 0,
[2026-03-04 23:44:10]     "exeErrorDiag": "",
[2026-03-04 23:44:10]     "pilotErrorCode": 0,
[2026-03-04 23:44:10]     "pilotErrorDiag": "",
[2026-03-04 23:44:10]  *** Listing of results directory ***
[2026-03-04 23:44:10] total 465824
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc    584627 Mar  2 07:15 pilot3.tar.gz
[2026-03-04 23:44:10] -rwx------. 1 boinc boinc     36322 Mar  2 07:18 runpilot2-wrapper.sh
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc      5111 Mar  2 07:20 queuedata.json
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc       100 Mar  4 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 23:44:10] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 21:41 run_atlas
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc       105 Mar  4 21:41 job.xml
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc      6703 Mar  4 21:41 init_data.xml
[2026-03-04 23:44:10] -rw-r--r--. 2 boinc boinc 283247805 Mar  4 21:41 EVNT.48753940._000011.pool.root.1
[2026-03-04 23:44:10] -rw-r--r--. 2 boinc boinc     15845 Mar  4 21:41 start_atlas.sh
[2026-03-04 23:44:10] drwxrwx--x. 2 boinc boinc      4096 Mar  4 21:41 shared
[2026-03-04 23:44:10] -rw-r--r--. 2 boinc boinc    597943 Mar  4 21:41 input.tar.gz
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc         0 Mar  4 21:41 boinc_lockfile
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc      2547 Mar  4 21:41 pandaJob.out
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc    997757 Mar  4 21:41 agis_schedconf.cvmfs.json
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc   1521291 Mar  4 21:41 agis_ddmendpoints.agis.ALL.json
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc       444 Mar  4 21:41 workernode_map.json
[2026-03-04 23:44:10] drwx------. 5 boinc boinc      4096 Mar  4 21:41 pilot3
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc 187126487 Mar  4 23:42 HITS.48753942._000262.pool.root.1
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc      1032 Mar  4 23:43 memory_monitor_summary.json
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc       529 Mar  4 23:43 boinc_task_state.xml
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc    300993 Mar  4 23:43 log.48753942._000262.job.log.tgz.1
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc        95 Mar  4 23:43 pilot_heartbeat.json
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc      6344 Mar  4 23:43 heartbeat.json
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc      8192 Mar  4 23:44 boinc_mmap_file
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc        27 Mar  4 23:44 wrapper_checkpoint.txt
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc      4901 Mar  4 23:44 pilotlog.txt
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc   1042450 Mar  4 23:44 log.48753942._000262.job.log.1
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc       357 Mar  4 23:44 output.list
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc       620 Mar  4 23:44 runtime_log
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc   1361920 Mar  4 23:44 result.tar.gz
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc       663 Mar  4 23:44 vUoMDmymBH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFlCLDmsMGhFn.diag
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc      9204 Mar  4 23:44 runtime_log.err
[2026-03-04 23:44:10] -rw-r--r--. 1 boinc boinc     21118 Mar  4 23:44 stderr.txt
[2026-03-04 23:44:10] HITS file was successfully produced:
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc 187126487 Mar  4 23:42 shared/HITS.pool.root.1
[2026-03-04 23:44:10]  *** Contents of shared directory: ***
[2026-03-04 23:44:10] total 461296
[2026-03-04 23:44:10] -rw-r--r--. 2 boinc boinc 283247805 Mar  4 21:41 ATLAS.root_0
[2026-03-04 23:44:10] -rw-r--r--. 2 boinc boinc     15845 Mar  4 21:41 start_atlas.sh
[2026-03-04 23:44:10] -rw-r--r--. 2 boinc boinc    597943 Mar  4 21:41 input.tar.gz
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc 187126487 Mar  4 23:42 HITS.pool.root.1
[2026-03-04 23:44:10] -rw-------. 1 boinc boinc   1361920 Mar  4 23:44 result.tar.gz
23:44:12 (3159924): run_atlas exited; CPU time 28213.135952
23:44:12 (3159924): called boinc_finish(0)

</stderr_txt>
]]>

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