Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:16:43 (765826): wrapper (7.7.26015): starting
07:16:43 (765826): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 07:16:43] Arguments: --nthreads 4
[2026-03-04 07:16:43] Threads: 4
[2026-03-04 07:16:43] Checking for CVMFS
[2026-03-04 07:16:43] No cvmfs_config command found, will try listing directly
[2026-03-04 07:16:43] CVMFS is ok
[2026-03-04 07:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 07:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 07:16:43] Further information can be found at the LHC@home message board.
[2026-03-04 07:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:16:43] Checking for apptainer binary...
[2026-03-04 07:16:43] which: no apptainer in ((null))
[2026-03-04 07:16:43] apptainer is not installed, using version from CVMFS
[2026-03-04 07:16:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:16:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-04 07:16:44] apptainer works
[2026-03-04 07:16:44] Set ATHENA_PROC_NUMBER=4
[2026-03-04 07:16:44] Set ATHENA_CORE_NUMBER=4
[2026-03-04 07:16:44] Starting ATLAS job with PandaID=7036134031
[2026-03-04 07:16:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 09:18:12]  *** The last 200 lines of the pilot log: ***
[2026-03-04 09:18:12] 2026-03-04 08:16:27,737 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7036134031/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,737 | INFO     | extracted standard info from prmon json
[2026-03-04 09:18:12] 2026-03-04 08:16:27,737 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 09:18:12] 2026-03-04 08:16:27,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 09:18:12] 2026-03-04 08:16:27,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 09:18:12] 2026-03-04 08:16:27,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 09:18:12] 2026-03-04 08:16:27,739 | INFO     | fitting pss+swap vs Time
[2026-03-04 09:18:12] 2026-03-04 08:16:27,739 | INFO     | sum of square deviations: 509440249.5
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | sum of deviations: 5049873074.5
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | mean x: 1772608603.5
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | mean y: 2331688.686440678
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | intersect: -17568813243.868988
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | chi2: 1.7551507616951105
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | sum of square deviations: 447383272.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | sum of deviations: 11398905971.000002
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | mean x: 1772608451.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | mean y: 2346714.3805309734
[2026-03-04 09:18:12] 2026-03-04 08:16:27,740 | INFO     | intersect: -45162053299.99677
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | chi2: 1.091827045757204
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | current chi2=1.091827045757204 (change=37.79297655873584 %)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | sum of square deviations: 390582207.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | sum of deviations: 10780549215.000002
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | mean x: 1772608298.5
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | mean y: 2345053.203703704
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | intersect: -48923823774.80096
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | chi2: 1.093469334927706
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | current chi2=1.093469334927706 (change=-0.1504166046155388 %)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | right removable region: 107
[2026-03-04 09:18:12] 2026-03-04 08:16:27,741 | INFO     | sum of square deviations: 447383272.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | sum of deviations: -5875561601.999999
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | mean x: 1772608756.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | mean y: 2357772.884955752
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | intersect: 23282334012.413612
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | chi2: 0.6871704150948934
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | current chi2=0.6871704150948934 (change=60.84835387979835 %)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | sum of square deviations: 390582207.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | sum of deviations: -5728944777.500001
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | mean x: 1772608908.5
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | mean y: 2357370.157407407
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | intersect: 26002462768.97055
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | chi2: 0.6877379546325223
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | current chi2=0.6877379546325223 (change=-0.08259079919069544 %)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,742 | INFO     | left removable region: 20
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | sum of square deviations: 204163828.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | sum of deviations: 390563114.00000006
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | mean x: 1772608878.0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | mean y: 2374632.563218391
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | intersect: -3388606277.6092052
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | chi2: 0.00044660337868546076
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | current memory leak: 1.91 B/s (using 87 data points, chi2=0.00)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | could have reported an average CPU frequency of 3633 MHz (7 samples)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | ..............................
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | . Timing measurements:
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | . get job = 0 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | . initial setup = 4 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | . payload setup = 4 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | . stage-in = 0 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,743 | INFO     | . payload execution = 7148 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,744 | INFO     | . stage-out = 0 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,744 | INFO     | . log creation = 0 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,744 | INFO     | ..............................
[2026-03-04 09:18:12] 2026-03-04 08:16:27,817 | INFO     | 
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | job summary report
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | --------------------------------------------------
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | PanDA job id: 7036134031
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | task id: 48841707
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | errors: (none)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | pilot state: finished 
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | transexitcode: 0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | exeerrorcode: 0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | exeerrordiag: 
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | exitcode: 0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | exitmsg: OK
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | cpuconsumptiontime: 27258 s
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | nevents: 400
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | neventsw: 0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | pid: 785471
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | pgrp: 785471
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | corecount: 4
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | event service: False
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | sizes: {0: 2286501, 1: 2286962, 11: 2286962, 7156: 2314387, 7158: 2323409, 7160: 2323465, 7162: 2323787}
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | --------------------------------------------------
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | 
[2026-03-04 09:18:12] 2026-03-04 08:16:27,818 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/0
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | job 7036134031 has completed (purged errors)
[2026-03-04 09:18:12] 2026-03-04 08:16:27,836 | INFO     | overall cleanup function is called
[2026-03-04 09:18:12] 2026-03-04 08:16:28,844 | INFO     | --- collectZombieJob: --- 10, [785471]
[2026-03-04 09:18:12] 2026-03-04 08:16:28,844 | INFO     | zombie collector waiting for pid 785471
[2026-03-04 09:18:12] 2026-03-04 08:16:28,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 09:18:12] 2026-03-04 08:16:28,844 | INFO     | collected zombie processes
[2026-03-04 09:18:12] 2026-03-04 08:16:28,844 | INFO     | will attempt to kill all subprocesses of pid=785471
[2026-03-04 09:18:12] 2026-03-04 08:16:29,322 | INFO     | process IDs to be killed: [785471] (in reverse order)
[2026-03-04 09:18:12] 2026-03-04 08:16:29,551 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 09:18:12] 2026-03-04 08:16:29,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 09:18:12] 2026-03-04 08:16:29,583 | INFO     | did not find any defunct processes belonging to 785471
[2026-03-04 09:18:12] 2026-03-04 08:16:29,614 | INFO     | did not find any defunct processes belonging to 785471
[2026-03-04 09:18:12] 2026-03-04 08:16:29,615 | INFO     | ready for new job
[2026-03-04 09:18:12] 2026-03-04 08:16:29,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 09:18:12] 2026-03-04 08:16:29,616 | INFO     | **************************************
[2026-03-04 09:18:12] 2026-03-04 08:16:29,617 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 09:18:12] 2026-03-04 08:16:29,617 | INFO     | **************************************
[2026-03-04 09:18:12] 2026-03-04 08:16:29,617 | INFO     | 
[2026-03-04 09:18:12] 2026-03-04 08:16:29,623 | INFO     | architecture information:
[2026-03-04 09:18:12] 2026-03-04 08:16:29,623 | INFO     | executing command: cat /etc/os-release
[2026-03-04 09:18:12] 2026-03-04 08:16:29,635 | INFO     | cat /etc/os-release:
[2026-03-04 09:18:12] NAME="CentOS Linux"
[2026-03-04 09:18:12] VERSION="7 (Core)"
[2026-03-04 09:18:12] ID="centos"
[2026-03-04 09:18:12] ID_LIKE="rhel fedora"
[2026-03-04 09:18:12] VERSION_ID="7"
[2026-03-04 09:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 09:18:12] ANSI_COLOR="0;31"
[2026-03-04 09:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 09:18:12] HOME_URL="https://www.centos.org/"
[2026-03-04 09:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 09:18:12] 
[2026-03-04 09:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 09:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 09:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 09:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 09:18:12] 
[2026-03-04 09:18:12] 2026-03-04 08:16:29,636 | INFO     | **************************************
[2026-03-04 09:18:12] 2026-03-04 08:16:30,139 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/0
[2026-03-04 09:18:12] 2026-03-04 08:16:30,154 | INFO     | sufficient remaining disk space (22558015488 B)
[2026-03-04 09:18:12] 2026-03-04 08:16:30,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 09:18:12] 2026-03-04 08:16:30,154 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 09:18:12] 2026-03-04 08:16:30,154 | INFO     | update_server=False
[2026-03-04 09:18:12] 2026-03-04 08:16:30,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 09:18:12] 2026-03-04 08:16:30,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 09:18:12] 2026-03-04 08:16:30,323 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 09:18:12] 2026-03-04 08:16:30,324 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 09:18:12] 2026-03-04 08:16:30,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:18:12] 2026-03-04 08:16:30,324 | INFO     | will abort loop
[2026-03-04 09:18:12] 2026-03-04 08:16:30,661 | INFO     | all payload control threads have been joined
[2026-03-04 09:18:12] 2026-03-04 08:16:30,860 | INFO     | all job control threads have been joined
[2026-03-04 09:18:12] 2026-03-04 08:16:31,152 | INFO     | all data control threads have been joined
[2026-03-04 09:18:12] 2026-03-04 08:16:31,161 | INFO     | [job] retrieve thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,330 | INFO     | [job] job monitor thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,392 | INFO     | [data] copytool_in thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,649 | INFO     | [payload] validate_post thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,668 | INFO     | [payload] control thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,847 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,866 | INFO     | [job] control thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,874 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:31,944 | INFO     | [job] validate thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:32,142 | INFO     | [payload] failed_post thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:32,161 | INFO     | [data] control thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:32,168 | INFO     | [data] copytool_out thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:32,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 09:18:12] 2026-03-04 08:16:32,621 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:32,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:18:12] 2026-03-04 08:16:33,811 | INFO     | [job] queue monitor thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:36,288 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:40,958 | INFO     | job.realtimelogging is not enabled
[2026-03-04 09:18:12] 2026-03-04 08:16:41,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 09:18:12] 2026-03-04 08:16:50,608 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-03-04 09:18:12] 2026-03-04 08:17:00,188 | INFO     | PID=771187 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 09:18:12] 2026-03-04 08:17:00,188 | INFO     | .. there are 41 such processes running
[2026-03-04 09:18:12] 2026-03-04 08:17:00,188 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 09:18:12] 2026-03-04 08:17:00,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 09:18:12] 2026-03-04 08:17:00,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 09:18:12] 2026-03-04 08:17:07,156 | INFO     | [monitor] cgroup control has ended
[2026-03-04 09:18:12] 2026-03-04 08:17:08,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22459356063552)>', '<ExcThread(monitor, started 22459044570880)>']
[2026-03-04 09:18:12] 2026-03-04 08:17:09,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 09:18:12] 2026-03-04 08:17:09,234 | INFO     | [monitor] control thread has ended
[2026-03-04 09:18:12] 2026-03-04 08:17:13,477 | INFO     | all workflow threads have been joined
[2026-03-04 09:18:12] 2026-03-04 08:17:13,477 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 09:18:12] 2026-03-04 08:17:13,477 | INFO     | traces error code: 0
[2026-03-04 09:18:12] 2026-03-04 08:17:13,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 09:18:12] 2026-03-04 08:17:13,612 [wrapper] ==== pilot stdout END ====
[2026-03-04 09:18:12] 2026-03-04 08:17:13,614 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 09:18:12] 2026-03-04 08:17:13,616 [wrapper] pilotpid: 771187
[2026-03-04 09:18:12] 2026-03-04 08:17:13,618 [wrapper] Pilot exit status: 0
[2026-03-04 09:18:12] 2026-03-04 08:17:13,626 [wrapper] pandaids: 7036134031
[2026-03-04 09:18:12] 2026-03-04 08:17:13,766 [wrapper] cleanup supervisor_pilot 1785197 771188
[2026-03-04 09:18:12] 2026-03-04 08:17:13,770 [wrapper] Test setup, not cleaning
[2026-03-04 09:18:12] 2026-03-04 08:17:13,774 [wrapper] apfmon messages muted
[2026-03-04 09:18:12] 2026-03-04 08:17:13,777 [wrapper] ==== wrapper stdout END ====
[2026-03-04 09:18:12] 2026-03-04 08:17:13,779 [wrapper] ==== wrapper stderr END ====
[2026-03-04 09:18:12]  *** Error codes and diagnostics ***
[2026-03-04 09:18:12]     "exeErrorCode": 0,
[2026-03-04 09:18:12]     "exeErrorDiag": "",
[2026-03-04 09:18:12]     "pilotErrorCode": 0,
[2026-03-04 09:18:12]     "pilotErrorDiag": "",
[2026-03-04 09:18:12]  *** Listing of results directory ***
[2026-03-04 09:18:12] total 572484
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc    584627 Mar  2 23:33 pilot3.tar.gz
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc      5111 Mar  2 23:33 queuedata.json
[2026-03-04 09:18:12] -rwx------. 1 boinc boinc     36322 Mar  2 23:34 runpilot2-wrapper.sh
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc       100 Mar  4 07:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 09:18:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 07:16 run_atlas
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc       105 Mar  4 07:16 job.xml
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc      6708 Mar  4 07:16 init_data.xml
[2026-03-04 09:18:12] -rw-r--r--. 2 boinc boinc 313297446 Mar  4 07:16 EVNT.48252644._000068.pool.root.1
[2026-03-04 09:18:12] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:16 start_atlas.sh
[2026-03-04 09:18:12] drwxrwx--x. 2 boinc boinc      4096 Mar  4 07:16 shared
[2026-03-04 09:18:12] -rw-r--r--. 2 boinc boinc    597943 Mar  4 07:16 input.tar.gz
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc         0 Mar  4 07:16 boinc_lockfile
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc      2492 Mar  4 07:16 pandaJob.out
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc    997749 Mar  4 07:16 agis_schedconf.cvmfs.json
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc   1516092 Mar  4 07:16 agis_ddmendpoints.agis.ALL.json
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc       445 Mar  4 07:16 workernode_map.json
[2026-03-04 09:18:12] drwx------. 5 boinc boinc      4096 Mar  4 07:16 pilot3
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc 266332683 Mar  4 09:15 HITS.48841707._001756.pool.root.1
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc       529 Mar  4 09:16 boinc_task_state.xml
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc        95 Mar  4 09:16 pilot_heartbeat.json
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc      1031 Mar  4 09:16 memory_monitor_summary.json
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc    310987 Mar  4 09:16 log.48841707._001756.job.log.tgz.1
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc      6354 Mar  4 09:16 heartbeat.json
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc      5087 Mar  4 09:17 pilotlog.txt
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc   1018745 Mar  4 09:17 log.48841707._001756.job.log.1
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc       357 Mar  4 09:17 output.list
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc       620 Mar  4 09:17 runtime_log
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc   1351680 Mar  4 09:17 result.tar.gz
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc      9221 Mar  4 09:17 runtime_log.err
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc       663 Mar  4 09:17 BEpLDmL1QH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmetELDmau19wm.diag
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc        27 Mar  4 09:17 wrapper_checkpoint.txt
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc      8192 Mar  4 09:18 boinc_mmap_file
[2026-03-04 09:18:12] -rw-r--r--. 1 boinc boinc     20505 Mar  4 09:18 stderr.txt
[2026-03-04 09:18:12] HITS file was successfully produced:
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc 266332683 Mar  4 09:15 shared/HITS.pool.root.1
[2026-03-04 09:18:12]  *** Contents of shared directory: ***
[2026-03-04 09:18:12] total 567976
[2026-03-04 09:18:12] -rw-r--r--. 2 boinc boinc 313297446 Mar  4 07:16 ATLAS.root_0
[2026-03-04 09:18:12] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:16 start_atlas.sh
[2026-03-04 09:18:12] -rw-r--r--. 2 boinc boinc    597943 Mar  4 07:16 input.tar.gz
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc 266332683 Mar  4 09:15 HITS.pool.root.1
[2026-03-04 09:18:12] -rw-------. 1 boinc boinc   1351680 Mar  4 09:17 result.tar.gz
09:18:13 (765826): run_atlas exited; CPU time 27595.983276
09:18:13 (765826): called boinc_finish(0)

</stderr_txt>
]]>

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