Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:26:34 (1869253): wrapper (7.7.26015): starting
09:26:34 (1869253): wrapper: running run_atlas (--nthreads 3)
[2026-03-03 09:26:34] Arguments: --nthreads 3
[2026-03-03 09:26:34] Threads: 3
[2026-03-03 09:26:34] Checking for CVMFS
[2026-03-03 09:26:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 09:26:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 09:26:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 09:26:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 09:26:36] 2.9.2.0 964071 8236 72104 156838 2 49 25920895 36864001 0 130560 0 2486035 99.976 320233 18072 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-03 09:26:36] CVMFS is ok
[2026-03-03 09:26:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 09:26:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 09:26:36] Further information can be found at the LHC@home message board.
[2026-03-03 09:26:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 09:26:36] Checking for apptainer binary...
[2026-03-03 09:26:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 09:26:36] Running /usr/bin/apptainer --version
[2026-03-03 09:26:36] apptainer version 1.3.6-6.1
[2026-03-03 09:26:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 09:26:36] atlasA226
[2026-03-03 09:26:36] apptainer works
[2026-03-03 09:26:36] Set ATHENA_PROC_NUMBER=3
[2026-03-03 09:26:36] Set ATHENA_CORE_NUMBER=3
[2026-03-03 09:26:36] Starting ATLAS job with PandaID=7036071351
[2026-03-03 09:26:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 12:42:10]  *** The last 200 lines of the pilot log: ***
[2026-03-03 12:42:10] 2026-03-03 11:41:46,003 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,003 | INFO     | log transfer has been attempted: DONE
[2026-03-03 12:42:10] 2026-03-03 11:41:46,003 | INFO     | job 7036071351 has finished - writing final server update
[2026-03-03 12:42:10] 2026-03-03 11:41:46,003 | INFO     | total number of processed events: 400 (read)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,004 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7036071351/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,004 | INFO     | extracted standard info from prmon json
[2026-03-03 12:42:10] 2026-03-03 11:41:46,004 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 12:42:10] 2026-03-03 11:41:46,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 12:42:10] 2026-03-03 11:41:46,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 12:42:10] 2026-03-03 11:41:46,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | fitting pss+swap vs Time
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | sum of square deviations: 2194675568.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | sum of deviations: -35207438930.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | mean x: 1772532253.5
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | mean y: 2392313.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | intersect: 28437720967.71646
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | chi2: 2.4869898166319047
[2026-03-03 12:42:10] 2026-03-03 11:41:46,006 | INFO     | sum of square deviations: 2027639878.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,007 | INFO     | sum of deviations: -21276159561.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,007 | INFO     | mean x: 1772532101.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,007 | INFO     | mean y: 2404789.0160427806
[2026-03-03 12:42:10] 2026-03-03 11:41:46,007 | INFO     | intersect: 18601701546.322456
[2026-03-03 12:42:10] 2026-03-03 11:41:46,007 | INFO     | chi2: 1.630585744144919
[2026-03-03 12:42:10] 2026-03-03 11:41:46,007 | INFO     | current chi2=1.630585744144919 (change=34.43536707547929 %)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,007 | INFO     | sum of square deviations: 1869302025.5
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | sum of deviations: -20167751466.5
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | mean x: 1772531948.5
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | mean y: 2405857.0384615385
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | intersect: 19126112628.93752
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | chi2: 1.628836694142122
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | current chi2=1.628836694142122 (change=0.10726513518700105 %)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | right removable region: 181
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | sum of square deviations: 2027639878.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | sum of deviations: -60324254444.00001
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | mean x: 1772532406.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | mean y: 2414903.1711229947
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | intersect: 52736974442.04182
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | chi2: 1.0517866776328764
[2026-03-03 12:42:10] 2026-03-03 11:41:46,008 | INFO     | current chi2=1.0517866776328764 (change=57.70844453809239 %)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | sum of square deviations: 1869302025.5
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | sum of deviations: -51637707189.99999
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | mean x: 1772532558.5
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | mean y: 2406531.3626373624
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | intersect: 48966948372.09715
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | chi2: 1.029219889569105
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | current chi2=1.029219889569105 (change=2.1455670188331024 %)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | left removable region: 20
[2026-03-03 12:42:10] 2026-03-03 11:41:46,009 | INFO     | sum of square deviations: 1294014960.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | sum of deviations: -24081186062.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | mean x: 1772532528.0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | mean y: 2407641.863354037
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | intersect: 32988645766.74193
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | chi2: 0.10408043219603151
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | current memory leak: -18.61 B/s (using 161 data points, chi2=0.10)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | could have reported an average CPU frequency of 4061 MHz (10 samples)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | ..............................
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . Timing measurements:
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . get job = 0 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . initial setup = 4 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . payload setup = 5 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . stage-in = 0 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . payload execution = 11671 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . stage-out = 0 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | . log creation = 0 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,010 | INFO     | ..............................
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | 
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | job summary report
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | --------------------------------------------------
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | PanDA job id: 7036071351
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | task id: 48850739
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | errors: (none)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | pilot state: finished 
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | transexitcode: 0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | exeerrorcode: 0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | exeerrordiag: 
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | exitcode: 0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | exitmsg: OK
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | cpuconsumptiontime: 34274 s
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | nevents: 400
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | neventsw: 0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | pid: 1877798
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | pgrp: 1877798
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | corecount: 3
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | event service: False
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | sizes: {0: 2282363, 11: 2282363, 11680: 2311972, 11682: 2325775, 11684: 2325831, 11686: 2326025}
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | --------------------------------------------------
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | 
[2026-03-03 12:42:10] 2026-03-03 11:41:46,038 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 12:42:10] 2026-03-03 11:41:46,053 | INFO     | job 7036071351 has completed (purged errors)
[2026-03-03 12:42:10] 2026-03-03 11:41:46,054 | INFO     | overall cleanup function is called
[2026-03-03 12:42:10] 2026-03-03 11:41:46,780 | INFO     | PID=1873367 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 12:42:10] 2026-03-03 11:41:47,058 | INFO     | --- collectZombieJob: --- 10, [1877798]
[2026-03-03 12:42:10] 2026-03-03 11:41:47,059 | INFO     | zombie collector waiting for pid 1877798
[2026-03-03 12:42:10] 2026-03-03 11:41:47,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 12:42:10] 2026-03-03 11:41:47,059 | INFO     | collected zombie processes
[2026-03-03 12:42:10] 2026-03-03 11:41:47,059 | INFO     | will attempt to kill all subprocesses of pid=1877798
[2026-03-03 12:42:10] 2026-03-03 11:41:47,116 | INFO     | process IDs to be killed: [1877798] (in reverse order)
[2026-03-03 12:42:10] 2026-03-03 11:41:47,146 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 12:42:10] 2026-03-03 11:41:47,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 12:42:10] 2026-03-03 11:41:47,147 | INFO     | did not find any defunct processes belonging to 1877798
[2026-03-03 12:42:10] 2026-03-03 11:41:47,148 | INFO     | did not find any defunct processes belonging to 1877798
[2026-03-03 12:42:10] 2026-03-03 11:41:47,148 | INFO     | ready for new job
[2026-03-03 12:42:10] 2026-03-03 11:41:47,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 12:42:10] 2026-03-03 11:41:47,149 | INFO     | **************************************
[2026-03-03 12:42:10] 2026-03-03 11:41:47,149 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 12:42:10] 2026-03-03 11:41:47,149 | INFO     | **************************************
[2026-03-03 12:42:10] 2026-03-03 11:41:47,149 | INFO     | 
[2026-03-03 12:42:10] 2026-03-03 11:41:47,150 | INFO     | architecture information:
[2026-03-03 12:42:10] 2026-03-03 11:41:47,150 | INFO     | executing command: cat /etc/os-release
[2026-03-03 12:42:10] 2026-03-03 11:41:47,160 | INFO     | cat /etc/os-release:
[2026-03-03 12:42:10] NAME="CentOS Linux"
[2026-03-03 12:42:10] VERSION="7 (Core)"
[2026-03-03 12:42:10] ID="centos"
[2026-03-03 12:42:10] ID_LIKE="rhel fedora"
[2026-03-03 12:42:10] VERSION_ID="7"
[2026-03-03 12:42:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 12:42:10] ANSI_COLOR="0;31"
[2026-03-03 12:42:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 12:42:10] HOME_URL="https://www.centos.org/"
[2026-03-03 12:42:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 12:42:10] 
[2026-03-03 12:42:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 12:42:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 12:42:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 12:42:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 12:42:10] 
[2026-03-03 12:42:10] 2026-03-03 11:41:47,161 | INFO     | **************************************
[2026-03-03 12:42:10] 2026-03-03 11:41:47,664 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-03 12:42:10] 2026-03-03 11:41:47,678 | INFO     | sufficient remaining disk space (329478307840 B)
[2026-03-03 12:42:10] 2026-03-03 11:41:47,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 12:42:10] 2026-03-03 11:41:47,678 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 12:42:10] 2026-03-03 11:41:47,678 | INFO     | update_server=False
[2026-03-03 12:42:10] 2026-03-03 11:41:47,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 12:42:10] 2026-03-03 11:41:47,678 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-03 12:42:10] 2026-03-03 11:41:47,679 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 12:42:10] 2026-03-03 11:41:47,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 12:42:10] 2026-03-03 11:41:47,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 12:42:10] 2026-03-03 11:41:47,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:42:10] 2026-03-03 11:41:47,822 | INFO     | all payload control threads have been joined
[2026-03-03 12:42:10] 2026-03-03 11:41:47,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 12:42:10] 2026-03-03 11:41:47,935 | INFO     | all data control threads have been joined
[2026-03-03 12:42:10] 2026-03-03 11:41:47,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:42:10] 2026-03-03 11:41:47,953 | INFO     | aborting loop
[2026-03-03 12:42:10] 2026-03-03 11:41:48,684 | INFO     | [job] retrieve thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:48,685 | INFO     | [job] queue monitor thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:48,828 | INFO     | [payload] control thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:48,835 | INFO     | [job] validate thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:48,878 | INFO     | all job control threads have been joined
[2026-03-03 12:42:10] 2026-03-03 11:41:48,941 | INFO     | [data] control thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:48,959 | INFO     | [job] job monitor thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:48,997 | INFO     | [payload] validate_post thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:49,340 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:49,547 | INFO     | [data] copytool_in thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:49,571 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:49,828 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:49,850 | INFO     | [data] copytool_out thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:49,884 | INFO     | [job] control thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:49,975 | INFO     | [payload] failed_post thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:50,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 12:42:10] 2026-03-03 11:41:50,170 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:41:54,158 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 12:42:10] 2026-03-03 11:42:03,654 | INFO     | [monitor] cgroup control has ended
[2026-03-03 12:42:10] 2026-03-03 11:42:05,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564448524096)>', '<ExcThread(monitor, started 140564095801088)>']
[2026-03-03 12:42:10] 2026-03-03 11:42:05,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 12:42:10] 2026-03-03 11:42:05,776 | INFO     | [monitor] control thread has ended
[2026-03-03 12:42:10] 2026-03-03 11:42:10,544 | INFO     | all workflow threads have been joined
[2026-03-03 12:42:10] 2026-03-03 11:42:10,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 12:42:10] 2026-03-03 11:42:10,545 | INFO     | traces error code: 0
[2026-03-03 12:42:10] 2026-03-03 11:42:10,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 12:42:10] 2026-03-03 11:42:10,592 [wrapper] ==== pilot stdout END ====
[2026-03-03 12:42:10] 2026-03-03 11:42:10,595 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 12:42:10] 2026-03-03 11:42:10,598 [wrapper] pilotpid: 1873367
[2026-03-03 12:42:10] 2026-03-03 11:42:10,601 [wrapper] Pilot exit status: 0
[2026-03-03 12:42:10] 2026-03-03 11:42:10,609 [wrapper] pandaids: 7036071351
[2026-03-03 12:42:10] 2026-03-03 11:42:10,626 [wrapper] cleanup supervisor_pilot 1885104 1873368
[2026-03-03 12:42:10] 2026-03-03 11:42:10,628 [wrapper] Test setup, not cleaning
[2026-03-03 12:42:10] 2026-03-03 11:42:10,631 [wrapper] apfmon messages muted
[2026-03-03 12:42:10] 2026-03-03 11:42:10,633 [wrapper] ==== wrapper stdout END ====
[2026-03-03 12:42:10] 2026-03-03 11:42:10,636 [wrapper] ==== wrapper stderr END ====
[2026-03-03 12:42:10]  *** Error codes and diagnostics ***
[2026-03-03 12:42:10]     "exeErrorCode": 0,
[2026-03-03 12:42:10]     "exeErrorDiag": "",
[2026-03-03 12:42:10]     "pilotErrorCode": 0,
[2026-03-03 12:42:10]     "pilotErrorDiag": "",
[2026-03-03 12:42:10]  *** Listing of results directory ***
[2026-03-03 12:42:10] total 485616
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc      5111 Mar  2 19:26 queuedata.json
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc    584627 Mar  2 19:26 pilot3.tar.gz
[2026-03-03 12:42:10] -rwx------ 1 boinc boinc     36322 Mar  2 19:26 runpilot2-wrapper.sh
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc       100 Mar  3 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 12:42:10] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 09:26 run_atlas
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc       105 Mar  3 09:26 job.xml
[2026-03-03 12:42:10] -rw-r--r-- 2 boinc boinc 245356612 Mar  3 09:26 EVNT.48459247._000002.pool.root.1
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc      6680 Mar  3 09:26 init_data.xml
[2026-03-03 12:42:10] drwxrwx--x 2 boinc boinc      4096 Mar  3 09:26 shared
[2026-03-03 12:42:10] -rw-r--r-- 2 boinc boinc    597970 Mar  3 09:26 input.tar.gz
[2026-03-03 12:42:10] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:26 start_atlas.sh
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc         0 Mar  3 09:26 boinc_lockfile
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc      2628 Mar  3 09:26 pandaJob.out
[2026-03-03 12:42:10] -rw------- 1 boinc boinc    998420 Mar  3 09:26 agis_schedconf.cvmfs.json
[2026-03-03 12:42:10] -rw------- 1 boinc boinc       430 Mar  3 09:26 workernode_map.json
[2026-03-03 12:42:10] drwx------ 5 boinc boinc      4096 Mar  3 09:26 pilot3
[2026-03-03 12:42:10] -rw------- 1 boinc boinc 243966700 Mar  3 12:41 HITS.48850739._000040.pool.root.1
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc       530 Mar  3 12:41 boinc_task_state.xml
[2026-03-03 12:42:10] -rw------- 1 boinc boinc      1019 Mar  3 12:41 memory_monitor_summary.json
[2026-03-03 12:42:10] -rw------- 1 boinc boinc   1516104 Mar  3 12:41 agis_ddmendpoints.agis.ALL.json
[2026-03-03 12:42:10] -rw------- 1 boinc boinc    351550 Mar  3 12:41 log.48850739._000040.job.log.tgz.1
[2026-03-03 12:42:10] -rw------- 1 boinc boinc        95 Mar  3 12:41 pilot_heartbeat.json
[2026-03-03 12:42:10] -rw------- 1 boinc boinc      6311 Mar  3 12:41 heartbeat.json
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc        28 Mar  3 12:41 wrapper_checkpoint.txt
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc      8192 Mar  3 12:41 boinc_mmap_file
[2026-03-03 12:42:10] -rw------- 1 boinc boinc      4552 Mar  3 12:42 pilotlog.txt
[2026-03-03 12:42:10] -rw------- 1 boinc boinc   1654556 Mar  3 12:42 log.48850739._000040.job.log.1
[2026-03-03 12:42:10] -rw------- 1 boinc boinc       357 Mar  3 12:42 output.list
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc       620 Mar  3 12:42 runtime_log
[2026-03-03 12:42:10] -rw------- 1 boinc boinc   2027520 Mar  3 12:42 result.tar.gz
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc      8912 Mar  3 12:42 runtime_log.err
[2026-03-03 12:42:10] -rw------- 1 boinc boinc       663 Mar  3 12:42 3cBMDmu9MH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrNCLDm5YbJan.diag
[2026-03-03 12:42:10] -rw-r--r-- 1 boinc boinc     21069 Mar  3 12:42 stderr.txt
[2026-03-03 12:42:10] HITS file was successfully produced:
[2026-03-03 12:42:10] -rw------- 1 boinc boinc 243966700 Mar  3 12:41 shared/HITS.pool.root.1
[2026-03-03 12:42:10]  *** Contents of shared directory: ***
[2026-03-03 12:42:10] total 480448
[2026-03-03 12:42:10] -rw-r--r-- 2 boinc boinc 245356612 Mar  3 09:26 ATLAS.root_0
[2026-03-03 12:42:10] -rw-r--r-- 2 boinc boinc    597970 Mar  3 09:26 input.tar.gz
[2026-03-03 12:42:10] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:26 start_atlas.sh
[2026-03-03 12:42:10] -rw------- 1 boinc boinc 243966700 Mar  3 12:41 HITS.pool.root.1
[2026-03-03 12:42:10] -rw------- 1 boinc boinc   2027520 Mar  3 12:42 result.tar.gz
12:42:11 (1869253): run_atlas exited; CPU time 34350.229366
12:42:11 (1869253): called boinc_finish(0)

</stderr_txt>
]]>

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