Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:33:34 (899797): wrapper (7.7.26015): starting
10:33:34 (899797): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 10:33:34] Arguments: --nthreads 4
[2026-03-03 10:33:34] Threads: 4
[2026-03-03 10:33:34] Checking for CVMFS
[2026-03-03 10:33:34] No cvmfs_config command found, will try listing directly
[2026-03-03 10:33:34] CVMFS is ok
[2026-03-03 10:33:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 10:33:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 10:33:34] Further information can be found at the LHC@home message board.
[2026-03-03 10:33:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 10:33:34] Checking for apptainer binary...
[2026-03-03 10:33:35] which: no apptainer in ((null))
[2026-03-03 10:33:35] apptainer is not installed, using version from CVMFS
[2026-03-03 10:33:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 10:33:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-03 10:33:35] apptainer works
[2026-03-03 10:33:35] Set ATHENA_PROC_NUMBER=4
[2026-03-03 10:33:35] Set ATHENA_CORE_NUMBER=4
[2026-03-03 10:33:35] Starting ATLAS job with PandaID=7036056064
[2026-03-03 10:33:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 14:23:54]  *** The last 200 lines of the pilot log: ***
[2026-03-03 14:23:54] 2026-03-03 13:20:29,415 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7036056064/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,415 | INFO     | extracted standard info from prmon json
[2026-03-03 14:23:54] 2026-03-03 13:20:29,416 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 14:23:54] 2026-03-03 13:20:29,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 14:23:54] 2026-03-03 13:20:29,416 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 14:23:54] 2026-03-03 13:20:29,416 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 14:23:54] 2026-03-03 13:20:29,421 | INFO     | fitting pss+swap vs Time
[2026-03-03 14:23:54] 2026-03-03 13:20:29,421 | INFO     | sum of square deviations: 3438620752.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,423 | INFO     | sum of deviations: 3477408517.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,423 | INFO     | mean x: 1772537227.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,423 | INFO     | mean y: 2345677.385650224
[2026-03-03 14:23:54] 2026-03-03 13:20:29,423 | INFO     | intersect: -1790185832.8962848
[2026-03-03 14:23:54] 2026-03-03 13:20:29,424 | INFO     | chi2: 2.0046777282452357
[2026-03-03 14:23:54] 2026-03-03 13:20:29,424 | INFO     | sum of square deviations: 3212467674.5
[2026-03-03 14:23:54] 2026-03-03 13:20:29,425 | INFO     | sum of deviations: 16139006832.500008
[2026-03-03 14:23:54] 2026-03-03 13:20:29,426 | INFO     | mean x: 1772537074.5
[2026-03-03 14:23:54] 2026-03-03 13:20:29,426 | INFO     | mean y: 2354056.5733944955
[2026-03-03 14:23:54] 2026-03-03 13:20:29,426 | INFO     | intersect: -8902634523.791876
[2026-03-03 14:23:54] 2026-03-03 13:20:29,426 | INFO     | chi2: 1.3391819283674957
[2026-03-03 14:23:54] 2026-03-03 13:20:29,426 | INFO     | current chi2=1.3391819283674957 (change=33.197146379247286 %)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,427 | INFO     | sum of square deviations: 2996454322.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,428 | INFO     | sum of deviations: 15606162530.000004
[2026-03-03 14:23:54] 2026-03-03 13:20:29,428 | INFO     | mean x: 1772536922.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,428 | INFO     | mean y: 2353680.370892019
[2026-03-03 14:23:54] 2026-03-03 13:20:29,428 | INFO     | intersect: -9229390348.583454
[2026-03-03 14:23:54] 2026-03-03 13:20:29,429 | INFO     | chi2: 1.3397992924938749
[2026-03-03 14:23:54] 2026-03-03 13:20:29,429 | INFO     | current chi2=1.3397992924938749 (change=-0.04610009389327143 %)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,429 | INFO     | right removable region: 212
[2026-03-03 14:23:54] 2026-03-03 13:20:29,430 | INFO     | sum of square deviations: 3212467674.5
[2026-03-03 14:23:54] 2026-03-03 13:20:29,431 | INFO     | sum of deviations: -24311842312.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,431 | INFO     | mean x: 1772537379.5
[2026-03-03 14:23:54] 2026-03-03 13:20:29,431 | INFO     | mean y: 2364192.3853211007
[2026-03-03 14:23:54] 2026-03-03 13:20:29,431 | INFO     | intersect: 13416864703.81442
[2026-03-03 14:23:54] 2026-03-03 13:20:29,432 | INFO     | chi2: 0.7185677076104932
[2026-03-03 14:23:54] 2026-03-03 13:20:29,432 | INFO     | current chi2=0.7185677076104932 (change=64.15545015110831 %)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,432 | INFO     | sum of square deviations: 2996454322.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,434 | INFO     | sum of deviations: -22156986446.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,434 | INFO     | mean x: 1772537532.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,434 | INFO     | mean y: 2362666.436619718
[2026-03-03 14:23:54] 2026-03-03 13:20:29,435 | INFO     | intersect: 13109216918.543684
[2026-03-03 14:23:54] 2026-03-03 13:20:29,435 | INFO     | chi2: 0.7177106659419676
[2026-03-03 14:23:54] 2026-03-03 13:20:29,435 | INFO     | current chi2=0.7177106659419676 (change=0.11927082993688934 %)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,435 | INFO     | left removable region: 20
[2026-03-03 14:23:54] 2026-03-03 13:20:29,436 | INFO     | sum of square deviations: 2194675568.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,437 | INFO     | sum of deviations: -3805047630.0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,437 | INFO     | mean x: 1772537501.5
[2026-03-03 14:23:54] 2026-03-03 13:20:29,437 | INFO     | mean y: 2367146.5
[2026-03-03 14:23:54] 2026-03-03 13:20:29,437 | INFO     | intersect: 3075527351.82138
[2026-03-03 14:23:54] 2026-03-03 13:20:29,437 | INFO     | chi2: 0.025786653556316312
[2026-03-03 14:23:54] 2026-03-03 13:20:29,438 | INFO     | current memory leak: -1.73 B/s (using 192 data points, chi2=0.03)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,438 | INFO     | could have reported an average CPU frequency of 2624 MHz (11 samples)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,438 | INFO     | ..............................
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . Timing measurements:
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . get job = 0 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . initial setup = 6 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . payload setup = 6 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . stage-in = 0 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . payload execution = 13570 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . stage-out = 1 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | . log creation = 0 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,439 | INFO     | ..............................
[2026-03-03 14:23:54] 2026-03-03 13:20:29,559 | INFO     | 
[2026-03-03 14:23:54] 2026-03-03 13:20:29,559 | INFO     | job summary report
[2026-03-03 14:23:54] 2026-03-03 13:20:29,559 | INFO     | --------------------------------------------------
[2026-03-03 14:23:54] 2026-03-03 13:20:29,559 | INFO     | PanDA job id: 7036056064
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | task id: 48838586
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | errors: (none)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | pilot state: finished 
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | transexitcode: 0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | exeerrorcode: 0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | exeerrordiag: 
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | exitcode: 0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | exitmsg: OK
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | cpuconsumptiontime: 50799 s
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | nevents: 400
[2026-03-03 14:23:54] 2026-03-03 13:20:29,560 | INFO     | neventsw: 0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | pid: 925480
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | pgrp: 925480
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | corecount: 4
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | event service: False
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | sizes: {0: 2281800, 1: 2282261, 11: 2282261, 13580: 2312702, 13582: 2326521, 13584: 2326577, 13585: 2326899}
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | --------------------------------------------------
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | 
[2026-03-03 14:23:54] 2026-03-03 13:20:29,561 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-03 14:23:54] 2026-03-03 13:20:29,581 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | job 7036056064 has completed (purged errors)
[2026-03-03 14:23:54] 2026-03-03 13:20:29,583 | INFO     | overall cleanup function is called
[2026-03-03 14:23:54] 2026-03-03 13:20:29,708 | INFO     | number of running child processes to parent process 925480: 1
[2026-03-03 14:23:54] 2026-03-03 13:20:29,708 | INFO     | maximum number of monitored processes: 6
[2026-03-03 14:23:54] 2026-03-03 13:20:29,708 | INFO     | aborting job monitoring since job object (job id=7036056064) has expired
[2026-03-03 14:23:54] 2026-03-03 13:20:30,592 | INFO     | --- collectZombieJob: --- 10, [925480]
[2026-03-03 14:23:54] 2026-03-03 13:20:30,592 | INFO     | zombie collector waiting for pid 925480
[2026-03-03 14:23:54] 2026-03-03 13:20:30,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 14:23:54] 2026-03-03 13:20:30,592 | INFO     | collected zombie processes
[2026-03-03 14:23:54] 2026-03-03 13:20:30,592 | INFO     | will attempt to kill all subprocesses of pid=925480
[2026-03-03 14:23:54] 2026-03-03 13:20:30,951 | INFO     | process IDs to be killed: [925480] (in reverse order)
[2026-03-03 14:23:54] 2026-03-03 13:20:31,065 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 14:23:54] 2026-03-03 13:20:31,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 14:23:54] 2026-03-03 13:20:31,076 | INFO     | did not find any defunct processes belonging to 925480
[2026-03-03 14:23:54] 2026-03-03 13:20:31,087 | INFO     | did not find any defunct processes belonging to 925480
[2026-03-03 14:23:54] 2026-03-03 13:20:31,087 | INFO     | ready for new job
[2026-03-03 14:23:54] 2026-03-03 13:20:31,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 14:23:54] 2026-03-03 13:20:31,090 | INFO     | **************************************
[2026-03-03 14:23:54] 2026-03-03 13:20:31,090 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 14:23:54] 2026-03-03 13:20:31,090 | INFO     | **************************************
[2026-03-03 14:23:54] 2026-03-03 13:20:31,090 | INFO     | 
[2026-03-03 14:23:54] 2026-03-03 13:20:31,093 | INFO     | architecture information:
[2026-03-03 14:23:54] 2026-03-03 13:20:31,094 | INFO     | executing command: cat /etc/os-release
[2026-03-03 14:23:54] 2026-03-03 13:20:31,110 | INFO     | cat /etc/os-release:
[2026-03-03 14:23:54] NAME="CentOS Linux"
[2026-03-03 14:23:54] VERSION="7 (Core)"
[2026-03-03 14:23:54] ID="centos"
[2026-03-03 14:23:54] ID_LIKE="rhel fedora"
[2026-03-03 14:23:54] VERSION_ID="7"
[2026-03-03 14:23:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 14:23:54] ANSI_COLOR="0;31"
[2026-03-03 14:23:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 14:23:54] HOME_URL="https://www.centos.org/"
[2026-03-03 14:23:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 14:23:54] 
[2026-03-03 14:23:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 14:23:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 14:23:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 14:23:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 14:23:54] 
[2026-03-03 14:23:54] 2026-03-03 13:20:31,110 | INFO     | **************************************
[2026-03-03 14:23:54] 2026-03-03 13:20:31,612 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-03 14:23:54] 2026-03-03 13:20:31,631 | INFO     | sufficient remaining disk space (669394141184 B)
[2026-03-03 14:23:54] 2026-03-03 13:20:31,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 14:23:54] 2026-03-03 13:20:31,631 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 14:23:54] 2026-03-03 13:20:31,631 | INFO     | update_server=False
[2026-03-03 14:23:54] 2026-03-03 13:20:31,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 14:23:54] 2026-03-03 13:20:31,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 14:23:54] 2026-03-03 13:20:31,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:23:54] 2026-03-03 13:20:31,632 | INFO     | aborting loop
[2026-03-03 14:23:54] 2026-03-03 13:20:32,221 | INFO     | all payload control threads have been joined
[2026-03-03 14:23:54] 2026-03-03 13:20:32,266 | INFO     | all data control threads have been joined
[2026-03-03 14:23:54] 2026-03-03 13:20:32,636 | INFO     | [job] retrieve thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:32,638 | INFO     | [job] job monitor thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:32,785 | INFO     | [payload] failed_post thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:32,922 | INFO     | [job] validate thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,023 | INFO     | all job control threads have been joined
[2026-03-03 14:23:54] 2026-03-03 13:20:33,047 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,226 | INFO     | [payload] control thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,271 | INFO     | [data] control thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,296 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,580 | INFO     | [data] copytool_in thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,638 | INFO     | [data] copytool_out thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,642 | INFO     | [payload] validate_post thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:33,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 14:23:54] 2026-03-03 13:20:34,028 | INFO     | [job] control thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:34,081 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:34,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:23:54] 2026-03-03 13:20:35,547 | INFO     | [job] queue monitor thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:37,738 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:20:42,158 | INFO     | job.realtimelogging is not enabled
[2026-03-03 14:23:54] 2026-03-03 13:20:43,163 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 14:23:54] 2026-03-03 13:21:02,264 | INFO     | PID=910492 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 14:23:54] 2026-03-03 13:21:02,264 | INFO     | .. there are 11 such processes running
[2026-03-03 14:23:54] 2026-03-03 13:21:02,265 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 14:23:54] 2026-03-03 13:21:02,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 14:23:54] 2026-03-03 13:21:02,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 14:23:54] 2026-03-03 13:21:15,735 | INFO     | [monitor] cgroup control has ended
[2026-03-03 14:23:54] 2026-03-03 13:21:16,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23293830694720)>', '<ExcThread(monitor, started 23293590775552)>']
[2026-03-03 14:23:54] 2026-03-03 13:21:17,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 14:23:54] 2026-03-03 13:21:17,339 | INFO     | [monitor] control thread has ended
[2026-03-03 14:23:54] 2026-03-03 13:21:21,717 | INFO     | all workflow threads have been joined
[2026-03-03 14:23:54] 2026-03-03 13:21:21,717 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 14:23:54] 2026-03-03 13:21:21,718 | INFO     | traces error code: 0
[2026-03-03 14:23:54] 2026-03-03 13:21:21,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 14:23:54] 2026-03-03 13:21:21,898 [wrapper] ==== pilot stdout END ====
[2026-03-03 14:23:54] 2026-03-03 13:21:21,901 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 14:23:54] 2026-03-03 13:21:21,903 [wrapper] pilotpid: 910492
[2026-03-03 14:23:54] 2026-03-03 13:21:21,906 [wrapper] Pilot exit status: 0
[2026-03-03 14:23:54] 2026-03-03 13:21:21,916 [wrapper] pandaids: 7036056064
[2026-03-03 14:23:54] 2026-03-03 13:21:21,990 [wrapper] cleanup supervisor_pilot 1108714 910495
[2026-03-03 14:23:54] 2026-03-03 13:21:21,994 [wrapper] Test setup, not cleaning
[2026-03-03 14:23:54] 2026-03-03 13:21:21,997 [wrapper] apfmon messages muted
[2026-03-03 14:23:54] 2026-03-03 13:21:21,999 [wrapper] ==== wrapper stdout END ====
[2026-03-03 14:23:54] 2026-03-03 13:21:22,002 [wrapper] ==== wrapper stderr END ====
[2026-03-03 14:23:54]  *** Error codes and diagnostics ***
[2026-03-03 14:23:54]     "exeErrorCode": 0,
[2026-03-03 14:23:54]     "exeErrorDiag": "",
[2026-03-03 14:23:54]     "pilotErrorCode": 0,
[2026-03-03 14:23:54]     "pilotErrorDiag": "",
[2026-03-03 14:23:54]  *** Listing of results directory ***
[2026-03-03 14:23:54] total 487568
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-03 14:23:54] -rwx------ 1 boinc boinc     36322 Mar  2 19:04 runpilot2-wrapper.sh
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc      5111 Mar  2 19:05 queuedata.json
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc       100 Mar  3 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 14:23:54] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 10:33 run_atlas
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc       105 Mar  3 10:33 job.xml
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc      6638 Mar  3 10:33 init_data.xml
[2026-03-03 14:23:54] -rw-r--r-- 2 boinc boinc 275287379 Mar  3 10:33 EVNT.48220221._000068.pool.root.1
[2026-03-03 14:23:54] -rw-r--r-- 2 boinc boinc     15845 Mar  3 10:33 start_atlas.sh
[2026-03-03 14:23:54] drwxrwx--x 2 boinc boinc      4096 Mar  3 10:33 shared
[2026-03-03 14:23:54] -rw-r--r-- 2 boinc boinc    597955 Mar  3 10:33 input.tar.gz
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc         0 Mar  3 10:33 boinc_lockfile
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc      2561 Mar  3 10:33 pandaJob.out
[2026-03-03 14:23:54] -rw------- 1 boinc boinc    998412 Mar  3 10:33 agis_schedconf.cvmfs.json
[2026-03-03 14:23:54] -rw------- 1 boinc boinc       446 Mar  3 10:33 workernode_map.json
[2026-03-03 14:23:54] drwx------ 5 boinc boinc      4096 Mar  3 10:33 pilot3
[2026-03-03 14:23:54] -rw------- 1 boinc boinc 215455879 Mar  3 14:19 HITS.48838586._001751.pool.root.1
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc       528 Mar  3 14:19 boinc_task_state.xml
[2026-03-03 14:23:54] -rw------- 1 boinc boinc      1033 Mar  3 14:20 memory_monitor_summary.json
[2026-03-03 14:23:54] -rw------- 1 boinc boinc   1516104 Mar  3 14:20 agis_ddmendpoints.agis.ALL.json
[2026-03-03 14:23:54] -rw------- 1 boinc boinc    389577 Mar  3 14:20 log.48838586._001751.job.log.tgz.1
[2026-03-03 14:23:54] -rw------- 1 boinc boinc      6395 Mar  3 14:20 heartbeat.json
[2026-03-03 14:23:54] -rw------- 1 boinc boinc        95 Mar  3 14:21 pilot_heartbeat.json
[2026-03-03 14:23:54] -rw------- 1 boinc boinc      4901 Mar  3 14:21 pilotlog.txt
[2026-03-03 14:23:54] -rw------- 1 boinc boinc   1908495 Mar  3 14:21 log.48838586._001751.job.log.1
[2026-03-03 14:23:54] -rw------- 1 boinc boinc       357 Mar  3 14:21 output.list
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc       620 Mar  3 14:21 runtime_log
[2026-03-03 14:23:54] -rw------- 1 boinc boinc   2314240 Mar  3 14:21 result.tar.gz
[2026-03-03 14:23:54] -rw------- 1 boinc boinc       665 Mar  3 14:21 vXDMDmIoMH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDKCLDm5vKkUm.diag
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc      9205 Mar  3 14:21 runtime_log.err
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc        26 Mar  3 14:23 wrapper_checkpoint.txt
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc      8192 Mar  3 14:23 boinc_mmap_file
[2026-03-03 14:23:54] -rw-r--r-- 1 boinc boinc     20823 Mar  3 14:23 stderr.txt
[2026-03-03 14:23:54] HITS file was successfully produced:
[2026-03-03 14:23:54] -rw------- 1 boinc boinc 215455879 Mar  3 14:19 shared/HITS.pool.root.1
[2026-03-03 14:23:54]  *** Contents of shared directory: ***
[2026-03-03 14:23:54] total 482112
[2026-03-03 14:23:54] -rw-r--r-- 2 boinc boinc 275287379 Mar  3 10:33 ATLAS.root_0
[2026-03-03 14:23:54] -rw-r--r-- 2 boinc boinc     15845 Mar  3 10:33 start_atlas.sh
[2026-03-03 14:23:54] -rw-r--r-- 2 boinc boinc    597955 Mar  3 10:33 input.tar.gz
[2026-03-03 14:23:54] -rw------- 1 boinc boinc 215455879 Mar  3 14:19 HITS.pool.root.1
[2026-03-03 14:23:54] -rw------- 1 boinc boinc   2314240 Mar  3 14:21 result.tar.gz
14:23:56 (899797): run_atlas exited; CPU time 51334.032306
14:23:56 (899797): called boinc_finish(0)

</stderr_txt>
]]>

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